AACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTCCTCTTCTCCCAAAAGAAAAAGATTAGACAAGCAATCAAACCC
TCACACGCAGCCTGGAGCAATTCCCAAAATTCTGGGTGTATTTCTCGTTT
GTAAAAATTTAGCAAAGAAAATTCCAAAGATCTGTAATCAGAGCTTCTTT
GCGCAGTTTTCTGCTTCTTAGACAACTTGGGATCGGATCTGCCCTTCCGA
AATGTCCACCTTCCCTGAACCTAGTAAATAGGAAAACTTGGTTTGTGTGT
TTAGATTTTTTTTTTCTTAATTCCCAAGAACCTAAGTGGGGAAAGGCTGG
AAGGAAATCCTGCAAGAACCTAACTCCACAGCTCGGTCTGCACTAATGAC
TTCCTTCCCTTCAGTGCGAGCACAGCCAGCCCAGCTCCAGCCACCACAGC
ACAGAGTTTCTGGGTCTTAGTGCCACGACATTTACACAGCAGAAAAGTGA
AGCTACAGTTCCATATGCGTCCACAGGCCGGCTCCGAAACCTCTCAAGAA
TTCTTATATTTGTATGAGCTACTTGGAGAAGTAAAAGGGGCAAGAGTCCA
AATCAAACTTCCACAGAGGGGCTGGAGAGATGGCCGCCGCGTGGCTAACT
GTACTGAGGACCTATTCCCAGAGGACAAGCCATTGCCTGGGATTCGACCT
CCACTGACTCCTGCATATGACTGTGAGACTCANACAAGCAAAACNCAACA
TAAATTAAAT

CCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTTCACTCTGTAGACCAGGCTGGCTG
CCCGATTCTGCTTCCTGAGTGCTGGGATTAAAGGGGTGTGCCACTGCAGC
CTGGTTTATTCAAGAAGTCTTAACGGCTGCTCATCATTTCATGGTTATGT
ATAAACCATCAATTATTTAACCCATAATTGTACCCAGCCTGGTGTAGTGG
CACATGCCTGGAATCTTGGCACTTGGGAGGCTGAGGCGGGAATATCTGGA
ATTTGTGGCCAGCAAGTTCGAGTCCAGCTGGGTTACACGAGACTCTCTCA
AAGAACAAGTAAATAGAGCTGGAATGTAGCTCAGTTGGTAGAAAGCATTT
GCCTAGTGTGCACAAAGTTCTGGGTTTTATTCCTAGCACCCCTATAAATT
GGGAATGGTCGGCACATGATTGCAAACTCAGCATCAGGAAACTTGAGGCA
GAAGGATTAGAAGTTTACCATCACACAGGGCCCCCAATGGAGGAGCTAGA
GAAAGCACCCAAGAGCTGAAGGGGTCTGCAACCCTATAGGTAGAACAACA
ATATGAACTAACCAGTACCCCTAGAGCTCGTGTCTCTAGCTGCATATGTA
GCAGAAGATGGCCTAGCCGACCATCGTTGGGAAGAGAGGCCCCTTGGTCT
TGCGAACGCTCAGGCCAANAAGTGGGAGTGAGTGGGTAAGGGGAAGTTGG
CTTTTT

Query= MSMg01no507_e02.b1 MSMg01no507_e02.b1 CHROMAT_FILE:
MSMg01no507_e02.b1 PHD_FILE: MSMg01no507_e02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:35:44 2005
         (644 letters)



>mm_chr5_111407187_111408231
          Length = 1045

 Score = 1216 bits (629), Expect = 0.0
 Identities = 638/641 (99%), Gaps = 1/641 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctcctcttctcc-caaaagaaaaagattagacaagcaatcaaaccctcacacgca 63
           |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 gaattctcctcttctccaaaaaagaaaaagattagacaagcaatcaaaccctcacacgca 786

                                                                       
Query: 64  gcctggagcaattcccaaaattctgggtgtatttctcgtttgtaaaaatttagcaaagaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 gcctggagcaattcccaaaattctgggtgtatttctcgtttgtaaaaatttagcaaagaa 726

                                                                       
Query: 124 aattccaaagatctgtaatcagagcttctttgcgcagttttctgcttcttagacaacttg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aattccaaagatctgtaatcagagcttctttgcgcagttttctgcttcttagacaacttg 666

                                                                       
Query: 184 ggatcggatctgcccttccgaaatgtccaccttccctgaacctagtaaataggaaaactt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ggatcggatctgcccttccgaaatgtccaccttccctgaacctagtaaataggaaaactt 606

                                                                       
Query: 244 ggtttgtgtgtttagattttttttttcttaattcccaagaacctaagtggggaaaggctg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 ggtttgtgtgtttagattttttttttcttaattcccaagaacctaagtggggaaaggctg 546

                                                                       
Query: 304 gaaggaaatcctgcaagaacctaactccacagctcggtctgcactaatgacttccttccc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaaggaaatcctgcaagaacctaactccacagctcggtctgcactaatgacttccttccc 486

                                                                       
Query: 364 ttcagtgcgagcacagccagcccagctccagccaccacagcacagagtttctgggtctta 423
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 485 ttcagtgcgagcacagccagcccagctccagccaccacagcaaagagtttctgggtctta 426

                                                                       
Query: 424 gtgccacgacatttacacagcagaaaagtgaagctacagttccatatgcgtccacaggcc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gtgccacgacatttacacagcagaaaagtgaagctacagttccatatgcgtccacaggcc 366

                                                                       
Query: 484 ggctccgaaacctctcaagaattcttatatttgtatgagctacttggagaagtaaaaggg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ggctccgaaacctctcaagaattcttatatttgtatgagctacttggagaagtaaaaggg 306

                                                                       
Query: 544 gcaagagtccaaatcaaacttccacagaggggctggagagatggccgccgcgtggctaac 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcaagagtccaaatcaaacttccacagaggggctggagagatggccgccgcgtggctaac 246

                                                    
Query: 604 tgtactgaggacctattcccagaggacaagccattgcctgg 644
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tgtactgaggacctattcccagaggacaagccattgcctgg 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1045
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1035
Effective search space:   656190
Effective search space used:   656190
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)