Query= MSMg01no509_d24.b1 MSMg01no509_d24.b1 CHROMAT_FILE:
MSMg01no509_d24.b1 PHD_FILE: MSMg01no509_d24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:26 2005
(637 letters)
>mm_chr5_32379207_32380243
Length = 1037
Score = 1208 bits (625), Expect = 0.0
Identities = 634/637 (99%)
Strand = Plus / Plus
Query: 1 atttgctgcctggcaaacaatacatcacagccaccaagaagctcaacaggaagactgttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgctgcctggcaaacaatacatcacagccaccaagaagctcaacaggaagactgttg 260
Query: 61 ttttaaccctacaaagaattaatatcctaaaggtgatcttgatcctcagggactataact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttaaccctacaaagaattaatatcctaaaggtgatcttgatcctcagggactataact 320
Query: 121 agaccctgagtctagactaataccaggtggtgctgtatggaaaccctgagcacctcctcc 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 agaccctgagtctagactaataccaggtggtgctatatggaaaccctgagcacctcctcc 380
Query: 181 tcctgttggagcctggaccccacactccctgtggtcagccctgctggttaggctgagcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcctgttggagcctggaccccacactccctgtggtcagccctgctggttaggctgagcac 440
Query: 241 ttcctctcagggggtctttctttggtgtttcccctttttcttactaagcaagagaaggcc 300
|||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcctctcagggggtcatcctttggtgtttcccctttttcttactaagcaagagaaggcc 500
Query: 301 atctgtgaccttgaaggtgactcaccatcatcaaatagatggtcacttccccctagcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atctgtgaccttgaaggtgactcaccatcatcaaatagatggtcacttccccctagcagg 560
Query: 361 tgagccgatgagtagcccttcttgtggccaaggctgtggtcagatccctcaccatccatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagccgatgagtagcccttcttgtggccaaggctgtggtcagatccctcaccatccatg 620
Query: 421 ggccttcacactgccatcacatcctggcctgagctaggttcctgcttgcccttagcagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggccttcacactgccatcacatcctggcctgagctaggttcctgcttgcccttagcagag 680
Query: 481 taatcgggggatcgtctgtgtgagcaaaataggcagaaacaagtgacaggacctgatgag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 taatcgggggatcgtctgtgtgagcaaaataggcagaaacaagtgacaggacctgatgag 740
Query: 541 cacagagctgggccttgcttgggctttgaagctcccagcagcacctcattcctcattccc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cacagagctgggccttgcttgggctttgaagctcccagcagcacctcattcctcattccc 800
Query: 601 agcacacctactacctgctgcagcttcaccagctcat 637
|||||||||||||||||||||||||||||||||||||
Sbjct: 801 agcacacctactacctgctgcagcttcaccagctcat 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1037
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1027
Effective search space: 643929
Effective search space used: 643929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_d24.g1 MSMg01no509_d24.g1 CHROMAT_FILE:
MSMg01no509_d24.g1 PHD_FILE: MSMg01no509_d24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:26 2005
(602 letters)
>mm_chr5_32511978_32512978
Length = 1001
Score = 1104 bits (571), Expect = 0.0
Identities = 595/603 (98%), Gaps = 3/603 (0%)
Strand = Plus / Minus
Query: 1 caggccagcgaggactatatagttagatcttgtctaaaaaaacaaacaaaacaaaatggc 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 801 caggccagcgaggactatatagttagatcttgtct-aaaaaacaaacaaaacaaaatggc 743
Query: 61 ctttatacaattttacaaaaagtacatcagcattctgagaaagtctaattgcttttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ctttatacaattttacaaaaagtacatcagcattctgagaaagtctaattgcttttaata 683
Query: 121 catgtttaaaactctcattaaaaagcataacatatctgaaaactat-aaaaaaaattgaa 179
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 682 catgtttaaaactctcattaaaaagcataacatatctgaaaactataaaaaaaaattgaa 623
Query: 180 tgttgtttccccatgttggtgttatcttaattttataatgtatatacataatgagtcaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tgttgtttccccatgttggtgttatcttaattttataatgtatatacataatgagtcaga 563
Query: 240 tattaagacttttgaatgtttaatcacttataataaaatgcattgcctagtagcagtgaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tattaagacttttgaatgtttaatcacttataataaaatgcattgcctagtagcagtgaa 503
Query: 300 ttacagttgaacaactttatcatcccaataaagaatgtagcccatctcaaaaatgacaaa 359
|||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 ttacagttgagcaactttatcatcccaataaagaatgtagcccatctcaacaatgacaaa 443
Query: 360 atatttttatctttttaatttacttagtttgactagcagaaaatagcttagagattttct 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ata-ttttatctttttaatttacttagtttgactagcagaaaatagcttagagattttct 384
Query: 420 aagcatcaacaaaatgatatcttagtaaagtttctcctttctaaataacttagtgtctgg 479
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 383 aagcattaacaaaatgatatcttagtaaagtttctcctttttaaataacttagtgtctgg 324
Query: 480 gggcagggcatcatttgtgccacagcacacacgggggtcttaggacaaccaaagggactg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gggcagggcatcatttgtgccacagcacacacgggggtcttaggacaaccaaagggactg 264
Query: 540 gagattaaacttagtaaccagcatgctaatccactgagctgtctgccagccccatgttct 599
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagattaaatttagtaaccagcatgctaatccactgagctgtctgccagccccatgttct 204
Query: 600 gac 602
|||
Sbjct: 203 gac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1001
Length adjustment: 10
Effective length of query: 592
Effective length of database: 991
Effective search space: 586672
Effective search space used: 586672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
