Query= MSMg01no510_b13.b1 MSMg01no510_b13.b1 CHROMAT_FILE:
MSMg01no510_b13.b1 PHD_FILE: MSMg01no510_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:35 2005
(412 letters)
>mm_chr5_93702451_93703263
Length = 813
Score = 768 bits (397), Expect = 0.0
Identities = 409/413 (99%), Gaps = 1/413 (0%)
Strand = Plus / Plus
Query: 1 agggccagcaaggtgtctgagcaggtaaggccacttgctgacaagctggagtttgagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggccagcaaggtgtctgagcaggtaaggccacttgctgacaagctggagtttgagtcc 260
Query: 61 agaacccacactggaaggagtaccaaccaccgtaagtgatttttttt-caactctacaca 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 agaacccacactggaaggagtaccaaccaccgtaagtgatttttttttcaactctacaca 320
Query: 120 tgctgtaacatacaatacaccctctttctccctcgtcctctctgtcccctccctgtcacc 179
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 tgctgtaacatacaatacaccctctccctccctcgtcctctctgtcccctccctgtcacc 380
Query: 180 tgagataagtaaatacatgtaacttaaaaattgaaagaagaaccggggtggaaacggaac 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagataagtaaatacatataacttaaaaattgaaagaagaaccggggtggaaacggaac 440
Query: 240 tcagttggtagtgtttcatggcatgcatggagtgttttgatccccaacaccattaaacca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagttggtagtgtttcatggcatgcatggagtgttttgatccccaacaccattaaacca 500
Query: 300 ggtgtggagttggaggcaggagggccagaaattcgaggtcatccttagctgttcatgatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggtgtggagttggaggcaggagggccagaaattcgaggtcatccttagctgttcatgatt 560
Query: 360 tcaagaccatgttacatgtgagatgctgtctcaaaaagaaataaaatcccttg 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaagaccatgttacatgtgagatgctgtctcaaaaagaaataaaatcccttg 613
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no510_b13.g1 MSMg01no510_b13.g1 CHROMAT_FILE:
MSMg01no510_b13.g1 PHD_FILE: MSMg01no510_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:39:35 2005
(396 letters)
>mm_chr5_93752883_93753677
Length = 795
Score = 671 bits (347), Expect = 0.0
Identities = 385/399 (96%), Gaps = 5/399 (1%)
Strand = Plus / Minus
Query: 1 ctcttcatgcaaatgaagcattcccagcacctcagcctcagccaatgatgaacactcacc 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 638 ctcttcatgcaaatgaagcattcccaggacctcagcctcagccaatgatgaacactcacc 579
Query: 61 ccaaaaatccctacccactccccaaggttgatacaaccccaatgatgagagctgatacgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 578 ccaaaaatccctacccactccccaaggttgatacaaccccaatgatgagagctgatacat 519
Query: 121 tgaaaaccatcttcagtaaaggttatttctcctgtagttctgttgatgtcgttcccgtct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgaaaaccatcttcagtaaaggttatttctcctgtagttctgttgatgtcgttcccgtct 459
Query: 181 aatccactcacccagataaacttcattccttccagtccagcccagtgtgctgtgttcctg 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 aatccacccacccagataaacttcattccttccagtccagcccagtgtgctgtgttcctg 399
Query: 241 gattttctgagaacagaagcagactccagcagcaacctccctgttgagatgaggtgaggg 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gataccctgagaacagaagcagactccagcagcaacctccctgttgagatgaggtgaggg 339
Query: 301 tggtgaataagtggtcttttatgtcgttcaggaagagcttaggggtgtacgtgt--gtgt 358
| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 338 t-gtgaataagtggtcttttatgtcgttcaggaagagcttaggggtgtacgtgtacgtgt 280
Query: 359 --gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg 395
||||| ||||| ||||| |||||||||||||||||||
Sbjct: 279 acgtgtgcgtgtgcgtgtgcgtgtgtgtgtgtgtgtgtg 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 16
Number of HSP's successfully gapped: 1
Length of query: 396
Length of database: 795
Length adjustment: 9
Effective length of query: 387
Effective length of database: 786
Effective search space: 304182
Effective search space used: 304182
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
