TTATTCTACTACACTTTACCAACTCACTCATATACTCCCACGTATACGCC
CTTTTCTCTCCACACTATCTTCTCTCTCCCCCACACCCGATACAATACAT
ATACGCAATACTATACACCTTATCGCACCTGCCTCGCTTTATTAAATTCA
AACACACACCCACGTAATAAGCACGCCGCACTCATATAAAGAACACACCC
AACATCAAAATCAACACACACACACACAACACACCCATTAAAACATAACA
CCACTCTCCAACGACTAACATCTACTTCTCGTCCCGCTCCTATCTTCACC
ATCTATCATACTATCTCTCAATTTGTTATATGTCACCCATTCTAATATAT
ATTTCACATATTACTCCCCTACACCACTATTACTCCACCTATATATTTAT
ATTCCTAACCCAAGTATCTATCTTCATATTCTTTACTAAACACCTACTAA
TCTCCATACTATACTATTGCCTCATCTCCTCCAACATAACACTTCTCTTG
TATACTTTCTACGCATCCTCTATCTATTATCTATATACTCACCCAGCATC
TCTACTCTCTTTTTAAACTATACATCTATCCTCTTCGTGTTTATTCACGA
GCGTACTCTCAAACTCGACCACGTCNCTGTACATTTACTTACTATCACTC
ATACCCCCTACTCCACTAGTNTTCTCGTATATATATATTTCCTGCTNTCG
CTCTCTCCTTCCGTTAAGAAGCACCCCTCGCACAAACACGCCACGCCTCA
CCTCCATCCCTTGNAATATACACATAGGACACNCCNCNCGAGACGAGAGC
TACGAGCACGAGTCTNNTATCATATAATATTCCTCTTCTCCACTATACTC
AATCGACAGCATGATCCTGATATCGACACACNCACGNTTCCATGTATGAA
CAGCGNATCATCTATCAGAGGAGAGCNTCAAATGAGAGAAATGAAGCNTC
AACGCACATAGTAGATGATATAGAGAGGNCACGAGCGCATGAAGATAGNC
NTTTATNTATATTAGGCCNCTTCATCATGAGCGCNNNACACTAGTCNCNA
ATAGAGATGCAAAGAGATATGAACNCGTGAATAGAAGAGAGTNNNATCGA
TGTGACAGAGTAGCGCNATGATAGTAACCTAA

CCATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTTGTGAAACATACATTGATACTCG
GTGCCAAGCCCTGTCCTTTGCACTGGAGTCTAATTTATATTAATAGACAA
CATCTGCATGCTCACAGTGCTTCTTCTGGAAGAAGTGTGGTGGATGTATG
CAAATGAACACATAGCACACTAGATTTTCCTTCTAAAAGAAGAAAAGACT
ACTTCCCCAATTCAATGTCAGACTCCAACAAATGCAGTAGGTTCTGGAAA
ATGTAGATACAACATAAAGGAACTCTGTATGTTAATGTTTTCTGCTATGT
CTACATACCTTTAACAAAGCATAATTTGTAAATTACAAATAGAAAGAGAT
TATTAAATAGAGAAACTAATAATAGAGCAGTCACAATATACTATAAACTG
AATGAATGTGGTCTCTCAGTTACTCTTGCTCTCTCTCTCATCACTCCCTC
TCTTCCTTCCTTTTTGTACCGAGACGTCTTCATACATACTGTTGAACCTT
CTTCTTCCTCCCTTCTTCACCTTCTCTCCTTCATCCTTCTTCCTAGGAAG
GAAATGTGTATGTGTGTGTGTGTGTGTGTGTGTGTGTNGTGTGTGNGTGT
NTCCCACTTTTTTTTCTTTTNTCTCCTCCTCTCTCAACTGTTTTTTTTAT
CCTTTTTTCGACTTATCCTATCTT

Query= MSMg01no514_b04.g1 MSMg01no514_b04.g1 CHROMAT_FILE:
MSMg01no514_b04.g1 PHD_FILE: MSMg01no514_b04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:44:49 2005
         (564 letters)



>mm_chr5_48167059_48168022
          Length = 964

 Score = 1046 bits (541), Expect = 0.0
 Identities = 558/565 (98%), Gaps = 4/565 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atttgtgaaacatacattgatactcggtgccaagccctgtcctttgcactggagtctaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttgtgaaacatacattgatactcggtgccaagccctgtcctttgcactggagtctaat 260

                                                                       
Query: 61  ttatattaatagacaacatctgcatgctcacagtgcttcttctggaagaagtgtggtgga 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 ttatattaatagacaacatctgcatgctcacagtgcttcttctgggagaagtgtggtgga 320

                                                                       
Query: 121 tgtatgcaaatgaacacatagcacactagattttccttctaaaagaagaaaagactactt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatgcaaatgaacacatagcacactagattttccttctaaaagaagaaaagactactt 380

                                                                       
Query: 181 ccccaattcaatgtcagactccaacaaatgcagtaggttctggaaaatgtagatacaaca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccaattcaatgtcagactccaacaaatgcagtaggttctggaaaatgtagatacaaca 440

                                                                       
Query: 241 taaaggaactctgtatgttaatgttttctgctatgtctacatacctttaacaaagcataa 300
           ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taaaggaact--gtatgttaatgttttctgctatgtctacatacctttaacaaagcataa 498

                                                                       
Query: 301 tttgtaaattacaaatagaaagagattattaaatagagaaactaataatagagcagtcac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttgtaaattacaaatagaaagagattattaaatagagaaactaataatagagcagtcac 558

                                                                       
Query: 361 aatatactataaactgaatgaatgtggtctctcagttactcttgctctctctctc--atc 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 559 aatatactataaactgaatgaatgtggtctctcagttactcttgctctctctctctcatc 618

                                                                       
Query: 419 actccctctcttccttcctttttgtaccgagacgtcttcatacatactgttgaaccttct 478
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 619 actccctctcttccttcctttttgtacccagacgtcttcatacatactgttgaaccttct 678

                                                                       
Query: 479 tcttcctcccttcttcaccttctctccttcatccttcttcctaggaaggaaatgtgtatg 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcttcctcccttcttcaccttctctccttcatccttcttcctaggaaggaaatgtgtatg 738

                                    
Query: 539 tgtgtgtgtgtgtgtgtgtgtgtgt 563
           ||||||||||||||||||| |||||
Sbjct: 739 tgtgtgtgtgtgtgtgtgtatgtgt 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 14
Number of successful extensions: 14
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 564
Length of database: 964
Length adjustment: 10
Effective length of query: 554
Effective length of database: 954
Effective search space:   528516
Effective search space used:   528516
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)