Query= MSMg01no514_e03.b1 MSMg01no514_e03.b1 CHROMAT_FILE:
MSMg01no514_e03.b1 PHD_FILE: MSMg01no514_e03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:05 2005
(591 letters)
>mm_chr5_9531561_9532551
Length = 991
Score = 1112 bits (575), Expect = 0.0
Identities = 587/591 (99%)
Strand = Plus / Minus
Query: 1 ataaaaagagagaaatagctgtctctgtttgtatgtctttacacatgtgtgggaagcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ataaaaagagagaaatagctgtctctgtttgtatgtctttacacatgtgtgggaagcaga 732
Query: 61 tgatctaagaaacgttagtctttcacctttcccccaatttcttccttctaaaatcacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgatctaagaaacgttagtctttcacctttcccccaatttcttccttctaaaatcacaca 672
Query: 121 ttatccagcaaagctttgaaaagcaggactttatgctgattccaattgctgccttaaaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 ttatccagcaaagctttgaaaagcaggactttatgctgattccaattgctgccttaaaag 612
Query: 181 tggtattacttgtgcttcgaatgagtttctctacagtgtattcaagaaagacaatcatat 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 611 tggtattacttgtgcttcgaatgagtttctctacagtgcattcaagaaagacaatcatat 552
Query: 241 atcctaaagccgacaaaagaagttgtattccaagggtaattttgaaactgttgcaagaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 atcctaaagccgacaaaagaagttgtattccaagggtaattttgaaactgttgcaagaaa 492
Query: 301 gtattgaaaactgaccattctagcagtgacaattagagatggagggaaccagccaagcat 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 491 gtattgaaaactgaccattctagcagtgacaattagagatggagggaaccagcctagcat 432
Query: 361 aatgctgtgctgcccagcagggctggggcaaaatcacctccaaatggctgggattagcag 420
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 431 aatgctgtgctgcccagcagggctggggcaaaatcacctccaaatggctgtgattagcag 372
Query: 421 ccacaaaatggacaagtctaaaaacggcaatttcttcagtgcaatgctcaggggtacctg 480
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 371 ccacaaaatggacaagtctaaaaacggcaatttctttagtgcaatgctcaggggtacctg 312
Query: 481 atccaagacatacaatatttaaacccttgaatgccgaatcacagactgccttcacctcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 atccaagacatacaatatttaaacccttgaatgccgaatcacagactgccttcacctcct 252
Query: 541 tccaaagtggtccattgctagttccaaagtgcttaagagtactagctgctg 591
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccaaagtggtccattgctagttccaaagtgcttaagagtactagctgctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 591
Length of database: 991
Length adjustment: 10
Effective length of query: 581
Effective length of database: 981
Effective search space: 569961
Effective search space used: 569961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no514_e03.g1 MSMg01no514_e03.g1 CHROMAT_FILE:
MSMg01no514_e03.g1 PHD_FILE: MSMg01no514_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:05 2005
(592 letters)
>mm_chr5_9361916_9362907
Length = 992
Score = 1137 bits (588), Expect = 0.0
Identities = 591/592 (99%)
Strand = Plus / Plus
Query: 1 tgtgcacctggtggagccctcagttgcaggtgactccagctcaaaagcatcctactcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtgcacctggtggagccctcagttgcaggtgactccagctcaaaagcatcctactcatt 260
Query: 61 ggatagctcagagtgggctgagatacggagcagtcctgagacctcaggtactaggatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatagctcagagtgggctgagatacggagcagtcctgagacctcaggtactaggatacc 320
Query: 121 ttgcctcatgggggtaattataatagttggttgaagcacttcctttgagaattctaatgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcctcatgggggtaattataatagttggttgaagcacttcctttgagaattctaatgc 380
Query: 181 ccatgctattttgatggtgttagatgttggtcatgttttctcttgagtccaattgtgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatgctattttgatggtgttagatgttggtcatgttttctcttgagtccaattgtgttt 440
Query: 241 gttctttgtctttcagataatttaggattgtgtactgggcatattaaatgctacctagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttctttgtctttcagataatttaggattgtgtactgggcatattaaatgctacctagtg 500
Query: 301 aggctgaatactgtactgttccttgtaatgttgacttgcttgttttgttttgtttctgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggctgaatactgtactgttccttgtaatgttgacttgcttgttttgttttgtttctgtt 560
Query: 361 cccacgaagtggacgtggtcaggttctaaccacatgttctatgacttctgtgctgataat 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cccaggaagtggacgtggtcaggttctaaccacatgttctatgacttctgtgctgataat 620
Query: 421 tccagtgtcagtcagttttcaaaatgtgggttgtttgtttatttgtggacatggatggtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccagtgtcagtcagttttcaaaatgtgggttgtttgtttatttgtggacatggatggtt 680
Query: 481 tgtctgttttttccgtgtacaccctcagaatttgggtcacacgtggttgttcacttctct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgtctgttttttccgtgtacaccctcagaatttgggtcacacgtggttgttcacttctct 740
Query: 541 acatgttagctatgctattttgtcagcaggctggaaagtgagcctgtgcttt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acatgttagctatgctattttgtcagcaggctggaaagtgagcctgtgcttt 792
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 592
Length of database: 992
Length adjustment: 10
Effective length of query: 582
Effective length of database: 982
Effective search space: 571524
Effective search space used: 571524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
