Query= MSMg01no515_a20.b1 MSMg01no515_a20.b1 CHROMAT_FILE:
MSMg01no515_a20.b1 PHD_FILE: MSMg01no515_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:12 2005
(626 letters)
>mm_chr5_100398349_100399374
Length = 1026
Score = 1197 bits (619), Expect = 0.0
Identities = 622/623 (99%)
Strand = Plus / Plus
Query: 4 ggaattctccagcctccatctccagtggagctgccacaattagtttcaaggaatgagata 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctccagcctccatctccagtggagctgccacaattagtttcaaggaatgagata 263
Query: 64 ttcttctacaaaccacaccctgccttcaatacaacagtcccgagtaacagcctagggatc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttcttctacaaaccacaccctgccttcaatacaacagtcccgagtaacagcctagggatc 323
Query: 124 tgttatctctattaagctactttagtatggtcaatctctgaaactggctgtgactaatgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgttatctctattaagctactttagtatggtcaatctctgaaactggctgtgactaatgt 383
Query: 184 ggatcgcactcgtttagcctttaaaacacacattttgtttaagttttgccaacaattcaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ggatcgcactcgtttagcctttaaaacacacattttgtttaagttttgccaacaattcaa 443
Query: 244 tttgccaacaagtcattactcgttctataatgaaaatctcccttccacactgtaaacagc 303
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 444 tttgccaacaagtcattactcgttctataacgaaaatctcccttccacactgtaaacagc 503
Query: 304 caggtaagttttccaaattttgtgtgaagtacaacagcttctgagcttatgacaaatgta 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caggtaagttttccaaattttgtgtgaagtacaacagcttctgagcttatgacaaatgta 563
Query: 364 tcagtattttggtagcataaaaaaactgtatttttcttatgctttaagaaaagctgaaca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tcagtattttggtagcataaaaaaactgtatttttcttatgctttaagaaaagctgaaca 623
Query: 424 gataaccagaaaacccaatacattacaaaacccacaacactgtattctattttactaaat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gataaccagaaaacccaatacattacaaaacccacaacactgtattctattttactaaat 683
Query: 484 aggaagtatgaaatccaacccatttttattctgtagtcacaagctttaactatatagtgt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aggaagtatgaaatccaacccatttttattctgtagtcacaagctttaactatatagtgt 743
Query: 544 acagcctagtgtttgtccactaacctgtataaacgggtacctcctgtaggatctctagaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 acagcctagtgtttgtccactaacctgtataaacgggtacctcctgtaggatctctagaa 803
Query: 604 tactaacgtgaacttcctctcag 626
|||||||||||||||||||||||
Sbjct: 804 tactaacgtgaacttcctctcag 826
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no515_a20.g1 MSMg01no515_a20.g1 CHROMAT_FILE:
MSMg01no515_a20.g1 PHD_FILE: MSMg01no515_a20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:12 2005
(607 letters)
>mm_chr5_100570341_100571347
Length = 1007
Score = 1079 bits (558), Expect = 0.0
Identities = 601/626 (96%), Gaps = 20/626 (3%)
Strand = Plus / Minus
Query: 1 caggagagccagggctatacaaagaaaccctgtcttga----------aaaacaaaacaa 50
||||| |||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 801 caggacagccagggctatacaaagaaaccctgtcttgaaaaacaaaacaaaacaaaacaa 742
Query: 51 aacaaaacaaacaaacaaacaaaaaaaccaacgagttttgttagagaatacaaataaaag 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aacaaaacaaacaaacaaacaaaaaaaccaacgagttttgttagagaatacaaataaaag 682
Query: 111 ataaaccatgaagggcaggatgggtccactgggggttggggtagaaaaacatctaatgcc 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataaaccatgaagggcaggatgggtccactgggggttggggtagaaaaacatctaatgcc 622
Query: 171 aggcagggtctttgttccttgttgattttattccaggagtacagaattgctctcctctgg 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aggcagggtctttgttccttgttgattttattccaggagtacagaattgctctcctctgg 562
Query: 231 cgggtggcatgggtctggggcgtgagagcagattaggagatgcttatccaaggatcattt 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cgggtggcatgggtctggggcgtgagagcagattaggagatgcttatccaaggatcattt 502
Query: 291 gattccacctgagtcagctggggtggctcccgggagcttgaagctcaagatgtgtccaac 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gattccacctgagtcagctggggtggctcccgggagcttgaagctcaagatgtgtccaac 442
Query: 351 acaggaaggaaaagcaactaactgcattgtcagttctgctctgagccaccaccgttagcc 410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggaaggaaaagcaactaactgcattgtcagttctgctctgagccaccaccgttagcc 382
Query: 411 ccccacctccatcagcccatcttccactttgtcatgagccgccactgcaaggtcccctag 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccccacctccatcagcccatcttccactttgtcatgagccgccactgcaaggtcccctag 322
Query: 471 tatcagctcatcttctgcttcgtcattggctgcacaatgcctgtacaacttggt-cattt 529
||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||| |
Sbjct: 321 tatcagctcatcttctgcttcgtcattggctgcacaatgcctgtacatcttg-tacatct 263
Query: 530 --------cctgagaggccagcaccagccatggaggccaacatttgaaattgagttgtga 581
|||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct: 262 gcacaatgcctgagaggccagcaccagccatggaggccaacattagaaactgagttgtga 203
Query: 582 gcagcctggagattctcttgcgtggt 607
||||||||||||||||||||||||||
Sbjct: 202 gcagcctggagattctcttgcgtggt 177
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
