TTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGGAAATTCTTGTCAAAACGGCTGACTTGGTTTTTGTTCCCCA
CCAGGACAGTCAATGGGGGCAAACACCAAAGAAAGATAACTGCTAGCCCT
TTTGTGGGAAATAGGAAATGTTGACACCAGTGAGGATGGCTGTAAGTGTA
TTTACAATATTGACACGAGATTGGCAGCTGCTCACATTCTGCCTGAAAGG
TTTACTACTGGCAGGGACTCCCAGCAGCTGCTTGCTGGGAACGTGAGAAA
ACATTTGGACAGTTAGGGTAGCCTGATTTCCCCCCTGAAAATCTGTTTGG
CAAAACTTCCTGGCAGTTAATAAGATTATGTGAAAAAAAAAAAAGATCTT
TTAATGTGTTCACATCTCTTCATAAAACTTATATTGCCAATATAGATAAT
ATTTTCAAAATCTATGATTTACAGAAATTTGATTGCTGAATAATGTTTCT
TTATTAGATTGTACAAATGGGGACTGGATTACAAGGTAATATTAGTATTT
TTAATGAAAGTTCTCTTCACAGAGTAACTTTCCTTTTAAAGAAATGACAA
ATTCCTGGGCTGGGGTACATTTTTAACAGAAAACTGAGATGAGAACAGAG
ACCATGATCCCACACTTTGTGATAAATTTGAAGTCTTCATTAAGAAATCA
ATTTAACTATGTTGGGTTTTTTGAGAGCTCATTTGCAAGCATTAGTGACA
TTTCCAG

ATTATTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAGAACTTTTATCATG
AATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGAT
CATGTGGTTTTTGTCTTTGAGTTTGTTTATATAGTGGATTACATTGATGG
ATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGG
TCAGGATGGATGATTGCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAAT
TTTATTGAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGT
TCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTG
GCTTCATAAAATGAGTTGGGTAGAGTACTTTCTACTTCTATCTTGTGAAA
AAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACT
CTGCACTAAACCCGTCTGGTCCTGGGCTTTTTTTGGCTGGGAGACTATTT
ATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAAC
TTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCA
TTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAGCCTTTTGTAGAAGGAT
CTGATGGTGTTTTGGATTTCTTCAGGATCTGTTGGTATGTCTCCCTTTTC
AGNTCTGATN

Query= MSMg01no518_d19.b1 MSMg01no518_d19.b1 CHROMAT_FILE:
MSMg01no518_d19.b1 PHD_FILE: MSMg01no518_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:50:35 2005
         (711 letters)



>mm_chr5_81556170_81557279
          Length = 1110

 Score = 1361 bits (704), Expect = 0.0
 Identities = 707/708 (99%), Gaps = 1/708 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcaaggaaattcttgtcaaaacggctgacttggtttttgttccccaccaggacag 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 ggaattcaaggaaattcttgtcaaaacggctgacttggtttttgttccccaccaggacag 851

                                                                       
Query: 64  tcaatgggggcaaacaccaaagaaagataactgctagcccttttgtgggaaataggaaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 tcaatgggggcaaacaccaaagaaagataactgctagcccttttgtgggaaataggaaat 791

                                                                       
Query: 124 gttgacaccagtgaggatggctgtaagtgtatttacaatattgacacgagattggcagct 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gttgacaccagtgaggatggctgtaagtgtatttacaatattgacacgagattggcagct 731

                                                                       
Query: 184 gctcacattctgcctgaaaggtttactactggcagggactcccagcagctgcttgctggg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 gctcacattctgcctgaaaggtttactactggcagggactcccagcagctgcttgctggg 671

                                                                       
Query: 244 aacgtgagaaaacatttggacagttagggtagcctgatttcccccctgaaaatctgtttg 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aacgtgagaaaacatttggacagttagggtagcctgatttcccccctgaaaatctgtttg 611

                                                                       
Query: 304 gcaaaacttcctggcagttaataagattatgtgaaaaaaaaaaaagatcttttaatgtgt 363
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 610 gcaaaacttcctggcagttaataagattatgtg-aaaaaaaaaaagatcttttaatgtgt 552

                                                                       
Query: 364 tcacatctcttcataaaacttatattgccaatatagataatattttcaaaatctatgatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tcacatctcttcataaaacttatattgccaatatagataatattttcaaaatctatgatt 492

                                                                       
Query: 424 tacagaaatttgattgctgaataatgtttctttattagattgtacaaatggggactggat 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tacagaaatttgattgctgaataatgtttctttattagattgtacaaatggggactggat 432

                                                                       
Query: 484 tacaaggtaatattagtatttttaatgaaagttctcttcacagagtaactttccttttaa 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 tacaaggtaatattagtatttttaatgaaagttctcttcacagagtaactttccttttaa 372

                                                                       
Query: 544 agaaatgacaaattcctgggctggggtacatttttaacagaaaactgagatgagaacaga 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 agaaatgacaaattcctgggctggggtacatttttaacagaaaactgagatgagaacaga 312

                                                                       
Query: 604 gaccatgatcccacactttgtgataaatttgaagtcttcattaagaaatcaatttaacta 663
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gaccatgatcccacactttgtgataaatttgaagtcttcattaagaaatcaatttaacta 252

                                                           
Query: 664 tgttgggttttttgagagctcatttgcaagcattagtgacatttccag 711
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tgttgggttttttgagagctcatttgcaagcattagtgacatttccag 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 711
Length of database: 1110
Length adjustment: 10
Effective length of query: 701
Effective length of database: 1100
Effective search space:   771100
Effective search space used:   771100
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)