XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CACTTGCAGGAATACCGAATGGCAGAGAAGAACCTGAAAAATGTTCAACA
TCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCACCT
CACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCT
GGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGC
AGGCTTGTACAACCACGTCTGGCGGTTCCTCAGAAAATTGGACATAGTAC
TACCGGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGTC
CCAACCGGTAAGAAGGATACATGCTCCATTATGTTCATAGCAGCCTTATT
TATAATAGCCAAAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAAT
GGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTATT
TAAAAGGATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGG
CATCATCCCTGGAGTGAAGTAACCCCCATCTTCCAAAGGGAACCCCCCCC
TCCGTTTTTGCTCCCCCCCCCCCCCCGGAAATAGGGGGTGTTTTTTTTTT
TATATCCTCTTCCCCATTTTACCTTTTGTTAGNTTGTAACGCCTTCTTTC
CCCCTTTCCTTCTCTTCCCTCCT

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXATCTCAATGAGTTATGGAACTTAT
TGAATATTTTGAAGAAAGTTTTGATGGAATTATAGGACTCTGAAAACACT
CAGAAGTTATTTTCCATCCTGTTTTGGCATCTGAGTATAACAATTTGACA
GTCAGCTTTCTTTCTTGCTACTAACCCTACATTGCACAGGAACTAAGACA
AGAGTTGTAAAGGAAGCCATGTAAATGTTTTGAGTTCCACTGTGTGAAAA
GGGTTGTACAATGGACTCACAGGGAGCAGATCATGAGTCTCACCACTGAA
GAGTTGTAATTAAAACTGTGATATTAAATAAAACAACTCTGAAATCTGAC
TTTACTGGCACAGTGAGTACCTCCACGCATGCTCCAAACACGGTCTATTT
GTACAGAGGTTTCGCTTACAGTGCAGAATCAGGTCTGGGATGCCCCCAGT
TCTGTGAAACTATAAAAAGGAAACTGCATAAAAAGAGAGGGATAGCTTAA
TTGATGCTAAAAATCCCTAAGGAATGACATATTTACTATGTTTTACATAC
ATCTTACTGCTTCATTTGATTGTCCCCAGCAACTCATTTTTACATGTGAA
CAGGANAGACCTGTAGAATGTATTTCAAACTCATTTAATGAAAGTGAAAA
ATAAAGACTCAACAAAGCAATCAGAAAAAACATN

Query= MSMg01no519_h01.g1 MSMg01no519_h01.g1 CHROMAT_FILE:
MSMg01no519_h01.g1 PHD_FILE: MSMg01no519_h01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:09 2005
         (581 letters)



>mm_chr5_13387941_13388926
          Length = 986

 Score = 1052 bits (544), Expect = 0.0
 Identities = 572/584 (97%), Gaps = 5/584 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atctcaatgagttatggaacttattgaatattttgaagaaagttttgatggaattatagg 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||
Sbjct: 201 atctcaatgagttatggaacttattgaatattttgaagaaagttttgatggaacgatagg 260

                                                                       
Query: 61  actctgaaaacactcagaagttattttccatcctgttttggc-----atctgagtataac 115
           ||||||||||||||||||||||||||||||||||||||||||     |||||||||||||
Sbjct: 261 actctgaaaacactcagaagttattttccatcctgttttggctattcatctgagtataac 320

                                                                       
Query: 116 aatttgacagtcagctttctttcttgctactaaccctacattgcacaggaactaagacaa 175
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 aatttgacagtcagctttctttcttgctgctaaccctacattgcacaggaactaagacaa 380

                                                                       
Query: 176 gagttgtaaaggaagccatgtaaatgttttgagttccactgtgtgaaaagggttgtacaa 235
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagttgtaaaggcagccatgtaaatgttttgagttccactgtgtgaaaagggttgtacaa 440

                                                                       
Query: 236 tggactcacagggagcagatcatgagtctcaccactgaagagttgtaattaaaactgtga 295
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggactcacagggagcagatcatgagtctcaccactgaagagttgtaattaaaactgtga 500

                                                                       
Query: 296 tattaaataaaacaactctgaaatctgactttactggcacagtgagtacctccacgcatg 355
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tattaaataaaacaactctgaaatctgactttactggcacagtgagtacctccacgcatg 560

                                                                       
Query: 356 ctccaaacacggtctatttgtacagaggtttcgcttacagtgcagaatcaggtctgggat 415
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctccaaacacggtctatttgtacagaggtttcgcttacagtgcagaatcaggtctgggat 620

                                                                       
Query: 416 gcccccagttctgtgaaactataaaaaggaaactgcataaaaagagagggatagcttaat 475
           |||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcccccagttctgtgagactgtaaaaaggaaactgcataaaaagagagggatagcttaat 680

                                                                       
Query: 476 tgatgctaaaaatccctaaggaatgacatatttactatgttttacatacatcttactgct 535
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 tgatgctaaaaatccctaaggaatgacatatttactatattttacatacatcttactgct 740

                                                       
Query: 536 tcatttgattgtccccagcaactcatttttacatgtgaacagga 579
           ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcatttgattgtccccagcaactcatttttacatgtgaacagga 784


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 986
Length adjustment: 10
Effective length of query: 571
Effective length of database: 976
Effective search space:   557296
Effective search space used:   557296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)