Query= MSMg01no519_p14.b1 MSMg01no519_p14.b1 CHROMAT_FILE:
MSMg01no519_p14.b1 PHD_FILE: MSMg01no519_p14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:52 2005
(675 letters)
>mm_chr5_64301611_64302685
Length = 1075
Score = 1276 bits (660), Expect = 0.0
Identities = 668/671 (99%)
Strand = Plus / Plus
Query: 5 gaattcttgttggtccaggaatctttagtgcagggcgcctgtggttccattggatcccat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttgttggtccaggaatctttagtgcagggcgcctgtggttccattggatcccat 264
Query: 65 gacgtcctagcggatcattttctaagcactagatgttttccagggaccttttgcaggcaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacgtcctagcggatcattttctaagcactagatgttttccagggaccttttgcaggcaa 324
Query: 125 gagtcttctgtaacagcccaactgtgtgtattaagatcttagggccaaagtcaacatgga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagtcttctgtaacagcccaactgtgtgtattaagatcttagggccaaagtcaacatgga 384
Query: 185 atctggggttcaggaacagatgtcagcacgccaacacaagctcaggctggaaatggctcc 244
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 atctggggttcaggaacagatgtcagcatgccaacacaagctcaggctggaaatggctcc 444
Query: 245 tctgtttgttcataatgccatgattccaagggagtagctgcctgggtatggacagccagg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctgtttgttcataatgccatgattccaagggagtagctgcctgggtatggacagccagg 504
Query: 305 aatgtgcacctggggacggttgtctaaaaggaagagctctttcccttttagaaacggaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgtgcacctggggacggttgtctaaaaggaagagctctttcccttttagaaacggaac 564
Query: 365 taaaactttcatcacaccttttaagcccaaagcttctttcaaagcaagctgaattctgtg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 taaaactttcatcacaccttttaagcccaaagcttctttcaaagcaagctgaattctgtg 624
Query: 425 tccagcgtagcaaaaatatgcccttttgggtttgatccgcatgcccattgacttcatgat 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccagcgtagcaaaaatatgcccttttgggtttgatccgcatgcccattgacttcatgat 684
Query: 485 agaaactgtataaaacatataaaaatattccctaggcgacttcattatctcgcaagtttg 544
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 685 agaaactgtataaaacatataaaaatattccctaggcgacttcattatctcgcaagttcg 744
Query: 545 gagtctcttagaactcttcaagaaagccagcagctgctacnagagaaaaacaacaaaaaa 604
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 745 gagtctcttagaactcttcaagaaagccagcagctgctacaagagaaaaacaacaaaaaa 804
Query: 605 gaggaaagctgtgacaaaaggagacataccacgtgctcatctgcctgagttaatgacaca 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaggaaagctgtgacaaaaggagacataccacgtgctcatctgcctgagttaatgacaca 864
Query: 665 ggaaagctgca 675
|||||||||||
Sbjct: 865 ggaaagctgca 875
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space: 708225
Effective search space used: 708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_p14.g1 MSMg01no519_p14.g1 CHROMAT_FILE:
MSMg01no519_p14.g1 PHD_FILE: MSMg01no519_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:52 2005
(562 letters)
>mm_chr5_64447927_64448889
Length = 963
Score = 1058 bits (547), Expect = 0.0
Identities = 559/563 (99%), Gaps = 2/563 (0%)
Strand = Plus / Minus
Query: 1 acattaaaaacaaaaaacaaaaaatagaagctccttctgggttcttagaattggtgttcg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 acattaaaaacaaaaaac-aaaaatagaagctccttctgggttcttagaattggtgttcg 810
Query: 61 tgcctccagcaggctaagcacaggttctaccactgggctacatccctagtgcttgattgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tgcctccagcaggctaagcacaggttctaccactgggctacatccctagtgcttgattgc 750
Query: 121 tgccttatttgggatttaagatcctgcattctgataggacaaattggtgtctctgcctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tgccttatttgggatttaagatcctgcattctgataggacaaattggtgtctctgcctct 690
Query: 181 ttcaaagtatttcagagcaacctgtttagccactctgagctgcccagctggcattggaaa 240
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttcaaagtatttcaaagcaacctgtttagccactctgagctgcccagctggcattggaaa 630
Query: 241 ga-ttttcagagccttctctctccagaccttcaggctatagagcatgaagttctttctcc 299
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gatttttcagagccttctctctccagaccttcaggctatagagcatgaagttctttctcc 570
Query: 300 atgcttgtaaaagccttttatctgggtgtgtagattaagaagctgcagatgacatcaaac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 atgcttgtaaaagccttttatctgggtgtgtagattaagaagctgcagatgacatcaaac 510
Query: 360 gtgatagaaacagacacaaagcacttacccggacaaaccgtcaccgaactaagccttgtt 419
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 509 gtgatagaaacagacacaaagcacttacccggacaaaccgtcaccgaactaagctttgtt 450
Query: 420 tgaagttgcagatctacatgcccagaggtggacggcaatgaggctgaccttgtctccctt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tgaagttgcagatctacatgcccagaggtggacggcaatgaggctgaccttgtctccctt 390
Query: 480 gttttcatttcccctccttgcttggggttcccatcagccaaaacaaaatcatggagagga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gttttcatttcccctccttgcttggggttcccatcagccaaaacaaaatcatggagagga 330
Query: 540 gcaaaggctgccctccttaagat 562
|||||||||||||||||||||||
Sbjct: 329 gcaaaggctgccctccttaagat 307
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 963
Length adjustment: 10
Effective length of query: 552
Effective length of database: 953
Effective search space: 526056
Effective search space used: 526056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
