CCCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCTCCCTTCATGTTCATAATTCTTAACAGTTTTTGTCAAAGTATTT
TATGGGATTGCTAATGCATTTGTAAGCCTTTCAATAAATAAGAGACTTTT
TTGCTAGCATGTAAATGAATGACTAACCACTTAAGTACTATTTTCCCCTC
CCTACTTTTAAAATTTTAATAGGTATTAAAGAATTAAATTGAATATTAAT
TTCTAGAAACGGAATTGTCAAAGGTTAGAAGGGTTTGTGGGTAAATCAGT
AGGAGAAAAGGATACATAAAGCTTCCAATGACCACATACATATGTGAACT
CCCATCCTTTCTCATCTAACAGGCAGGATATGAACAAGACTTTTTGTTGA
AATATAAGTGATCTGGAAGGTTCCATTGCATAGGAAGAAGTTGGCATAAA
CTCATTCATGTAGACACACATGAATAAATATGCACTGAGTTGCTCTTTCA
TCCATTTGCATTGTGCACTAGTACTTACATGTCCTTGAAGAACAGCCCAT
GTTCATAATGAGAAGAGCCTGTCTTGTTTATGTACTGCCTTTTTTGTATG
AGGATAAAGTGGATGGAAAATAATATGCAATGTTCTAACAATAAAGATAA
TAACCAAATAAAAGAAAATAATGAGGAAGGAACGAGGCAACATAACAGCA
ATGCACAGGAAACTTCCCTTACCCCTTCTGCCCCAGGTAGTGTGTGGGAG
AACAAAATG

CATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCACAGGAAGATCAGCAGAGTCAACTG
ACCTGTATCCTTATGGCTTTCAGAGTCTGAACCACCAACCAAAGAACATG
TAGCAGCTGGACGTATAACTCCCTGATCATATGTAGCAGATGTGTAGCTT
GGTCTTCACGTGGATGTGGATCTTGAACAAATGGAAAACAGGGCTATCCC
AAAAGCTGTTGCCTATAGGTGGGGTGTGCTCTTCTATATGGGTTGCCTTG
TCTGCCCTCAGTGGGAGAGTAAGGATCTAGCCTTGCAGAGATTAGAAGTG
CCAGGGTGGGGTGGATACCCAGGATGTCACCCCTGCTCAGAGGAGAAGGG
GTGGGGGAATGGAGAAGAATTGTGGAAGGAGGTGTATTAGGAGGAGGGCA
ATGAGCAGGTTATAAAGTGAACAAGAAAAAGAAGTAAAATTAAAAAAATA
ATAATCTGCCATGAAAACCTACATTTAAGTAACATTGCGTAGCTTGATCA
GCTTATATTTAGCTGGATACAGAAACATATTTATATTTATATATGGGATA
AGAGCCCATCAATTCGTAATACAGCTAGGAGAGGCATATTTATATGTTTG
GAGGGTAAAAACTGAAGGAGCTACTTGCTAAGTTTTTCTATAACCTTCAC
AGTTCAACTATCATTATGCACGCCTTATGCTATTACTTCGATAATTTTTT
CAAAATT

Query= MSMg01no521_f15.b1 MSMg01no521_f15.b1 CHROMAT_FILE:
MSMg01no521_f15.b1 PHD_FILE: MSMg01no521_f15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:39 2005
         (682 letters)



>mm_chr5_81081299_81082381
          Length = 1083

 Score = 1158 bits (599), Expect = 0.0
 Identities = 662/683 (96%), Gaps = 1/683 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttcctcccttcatgttcataattcttaacagtttttgtcaaagtattttatgggattgct 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 ttcctcccttcatgttcataattcttaacaatttttgtcaaagtattttatgggattgct 260

                                                                       
Query: 61  aatgcatttgtaagcctttcaataaataagagacttttttgctagcatgtaaatgaatga 120
           ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 aatgcatttgtaaacctttcaataaataagagacttttttgccagcatgtaaatgaatga 320

                                                                       
Query: 121 ctaaccacttaagtactattttcccctccctacttttaaaa-ttttaataggtattaaag 179
           |||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||
Sbjct: 321 ctaaccacttaagtactattttcccctccccatttttaaaacttttaataggtattaaag 380

                                                                       
Query: 180 aattaaattgaatattaatttctagaaacggaattgtcaaaggttagaagggtttgtggg 239
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 381 aattaaattgaatattaatttctagaaacagaattgtcaaaggttagaagggtgtgtggg 440

                                                                       
Query: 240 taaatcagtaggagaaaaggatacataaagcttccaatgaccacatacatatgtgaactc 299
           |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 441 taaatcagtaggagaaaaggatacataaagcttccaatgacctcaaacatatgtgaactc 500

                                                                       
Query: 300 ccatcctttctcatctaacaggcaggatatgaacaagactttttgttgaaatataagtga 359
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 501 ccatcctttctcgtctaacaggcaggatatgaacaagactttttgttgaaatataaatga 560

                                                                       
Query: 360 tctggaaggttccattgcataggaagaagttggcataaactcattcatgtagacacacat 419
           |||| ||||||||||||||||||||||||||||||||||||||||||  |||  ||||||
Sbjct: 561 tctgtaaggttccattgcataggaagaagttggcataaactcattcacataggtacacat 620

                                                                       
Query: 420 gaataaatatgcactgagttgctctttcatccatttgcattgtgcactagtacttacatg 479
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gaataaatatgcactgagttgctctttcatccatttgcaatgtgcactagtacttacatg 680

                                                                       
Query: 480 tccttgaagaacagcccatgttcataatgagaagagcctgtcttgtttatgtactgcctt 539
           ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 681 tccttgaagaacagcccatgttcataaagagaagagcctttcttgtttatgtactgcctt 740

                                                                       
Query: 540 ttttgtatgaggataaagtggatggaaaataatatgcaatgttctaacaataaagataat 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttttgtatgaggataaagtggatggaaaataatatgcaatgttctaacaataaagataat 800

                                                                       
Query: 600 aaccaaataaaagaaaataatgaggaaggaacgaggcaacataacagcaatgcacaggaa 659
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaccaaataatagaaaataatgaggaaggaacgaggcaacataacagcaatgcacaggaa 860

                                  
Query: 660 acttcccttaccccttctgcccc 682
           |||||||||||||||||||||||
Sbjct: 861 acttcccttaccccttctgcccc 883


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1083
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1073
Effective search space:   721056
Effective search space used:   721056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)