TGTTTGGATCCCAATATTTGGGGCGCTAATCGACTCACTATTCTGGAGAG
ATCCGCGGAATTCAAGGCCCATACCTAAACATGATAAAAGCAAACTACAG
CAAACCAGTAGCCAACATCAGAGTAAATGGTGAGAAGCTGGAAGCAATCC
CACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTC
AACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGAT
CAAGGAGATACAAATTGGAAATGAAGAAGTCAAAATATCACTTTTTGCAG
ATGATATGATAGTATATATAAGTGACCCTAAAAATTCTATCAGAGAACTC
CTAAGCCTGATAAACAGCTGCAATGAAGTAGCTGGATATAAAATTAACTC
ACACAAGTCAATGGCCTTCCTGTACACAAAACAGGCTGAGGAAGAAATTA
AGGAAACAACACCCTTCTCCATAGTCACAAACAATATAAAATACCTTGGT
GTGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAAGTTCAAGTC
TGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGC
TCATGGATTGGCAGGATCAATATAGTAAAAGTGGCTATCTTGCCAAAAGC
AATCTACAGATTCAATGAAATCCCCATCAAAATTCCAACTCAATTCTTCA
ACGAATTAGAAAGAGCAATCTGCAA

TTATTTATCTATGAAATGGGTAGCCTGGGCGGCCGCCTTGTTCAAAXXXX
XXXXXXXXXXXXXXXXXXTTTCCCCGCGGAATTCAAAGCCACTGTGGCAA
CAAAGCAAAATGTTATCTCCAAAACCAAACACAATCTAATACAACAAACA
CAAACAAATAAAAACAAATCACAATAATTATAATTGTGTGTCAAAAACCC
ATGAAAATGCTTGGCTCAAAGTTACTTTTTAAATTAGATTAATAATAAAA
TTAATGTGTGTTTCAAATATGTCTGTGCATTATGTGTTGTGTTAAATGAA
GTGAGCATATTATTTCAGATTAAAATCCTTAGCTCTCCTTCTTACAAGTT
TCAAATAATCAAACTGACTTGATCTTATAGGATACAGAGATTAAATTATG
ATGGTAAATGTGTCTTGACCCAAGGTTTTCATTTCTTGGAGAGGTCCTGG
AGTCCTCTTACATTATTTAGTCTTACTTGTTTTGACCTTTGTCTAATAGT
TTATTTCTAATATACATTTAGATTGTCTCCATTATCTTGAACATACATTT
ATTTATGGATTTCAGTACCAACTTTCTTAAGTATTTTTATCTATTGCTAA
ACTTTGTGTGTTTATTTAGGTTACAAAAGTCATCAAACTATATTCCTATT
CTCTTAATAACAGAGAAATCTTCATAGATGAAGTGTACTAGCACTTAGCA
CTATAACTAAAATCTA

Query= MSMg01no521_i08.g1 MSMg01no521_i08.g1 CHROMAT_FILE:
MSMg01no521_i08.g1 PHD_FILE: MSMg01no521_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:54:53 2005
         (384 letters)



>mm_chr5_41363354_41364137
          Length = 784

 Score =  735 bits (380), Expect = 0.0
 Identities = 383/384 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttttaaattagattaataataaaattaatgtgtgtttcaaatatgtctgtgcattatgtg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ttttaaattagattaataataaaattaatgtgtgtttcaaatatgtctgtgcattatgtg 554

                                                                       
Query: 61  ttgtgttaaatgaagtgagcatattatttcagattaaaatccttagctctccttcttaca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ttgtgttaaatgaagtgagcatattatttcagattaaaatccttagctctccttcttaca 494

                                                                       
Query: 121 agtttcaaataatcaaactgacttgatcttataggatacagagattaaattatgatggta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 agtttcaaataatcaaactgacttgatcttataggatacagagattaaattatgatggta 434

                                                                       
Query: 181 aatgtgtcttgacccaaggttttcatttcttggagaggtcctggagtcctcttacattat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 aatgtgtcttgacccaaggttttcatttcttggagaggtcctggagtcctcttacattat 374

                                                                       
Query: 241 ttagtcttacttgttttgacctttgtctaatagtttatttctaatatacatttagattgt 300
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 373 ttagtcttacttgttttgacctttgtctaaaagtttatttctaatatacatttagattgt 314

                                                                       
Query: 301 ctccattatcttgaacatacatttatttatggatttcagtaccaactttcttaagtattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ctccattatcttgaacatacatttatttatggatttcagtaccaactttcttaagtattt 254

                                   
Query: 361 ttatctattgctaaactttgtgtg 384
           ||||||||||||||||||||||||
Sbjct: 253 ttatctattgctaaactttgtgtg 230


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 784
Length adjustment: 9
Effective length of query: 375
Effective length of database: 775
Effective search space:   290625
Effective search space used:   290625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)