GATAAAAAATTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXCGCGGAATTCTGTACTAAATGGAAATTGCTAGTCATTTGGTTACT
ATGACAAAATAGCCAAGAGAAACAAAGGAGAGAAAATTTATTTTAGCTCA
TGATTTGAAACGTTTCAATCCATAGTTGATTGGTTCCATATTTTTGGACC
ATGGCAAGGCAGAGAAAAGCTGTTCTTTAGAGTGTTTAGGAAGCTGAGAT
GAGGTGGGAACAAGACATATCCTTCCAGGTATGCCCTCAATGACACACTT
CCTCCACTTGGACCCATTTCCGAATTTTTACCACTTCCCACCCCAATCAT
GACATCAAATTATTAGTAGAATCTATTAGTAGATTAATCCACTGATGAGT
TGAAAGTCCTCATGACATCTTCCTGTAGCCCATCAGCTGCTAACTAAGCC
TTTCATACAGAGCCTGCAGAGGACATTTCAGACTCAGAGCATAATAATAA
ACCTTGAAATAGGGTAAAATTGTTTCAGATTTGAAAATTTTTAATCAGGA
AATGTATTACCTAGCTGGGTGTCTAAGTTTACTTTTCAATTGCTGTGAAG
AACTCCTTCTCACATGACCAAGACAACTTANACGGCATGGTGGTAGATAG
AGGCAGGTGGATCTCTGCTTTTGAGGCTAGCCTACTCTANCAAGTGAGTT
CCAGGACAGTCATGGCTACACAGAGAAAACTGGTCTGGTCACCAACCA

GAGCCCCATACGCCCTCCCCGGGAATGAATGATGAAAAATCTACACCCCA
TATAAAAAACCATGAACACAGAAACAAACACCCTCGAGAAACACGAATAC
AAGGGTGTGCCTCGCCCTTTANAAAAACATCTTCCCCAAACTNCCCCGCC
CCAAAAGGGACTAAGATGGGGGGGTAGAGGGGCCCTTGGGGGCGGGGGNC
CCGGNCCCCTGGGGTCCTCGGAAAAAAAAACAATGTTTTAAGGGGTTGGG
AACCACCTTAAATAAGGAAAAATGGCCACCCCCCCGCCCGGGGGAAAAAT
TTTCCCCCTCCCAAAAAAAGAGGTAAATTGGGAAGGGCCCCCCCCCTTTA
AAAAAAAAGGGGGAAGGGGGAGGAAGGGTTTCCCCCTTTCCCCCCCAAAA
TAAAAAGCCCCCCAAAAAAAGGGGGGCTTTTTGGGGGGGGAAAACCCCCA
CATAAAAAAAAACCCCCCCAAAAAAATTTTGGGGGGCGCCCCCCCCCCCC
CGGGGGGGGGGCCCCCCCCCCTAAAAAAGCGTAACACACAAAAAAAACCC
CCCCGGGGGGGGGGAAAAAAAAAACACGCGGCGCAAACAGGGGGGGCCCC
CCCCCCCCTTTGAGGGGGAGGACACCCCCAAAAAAAAAAACCCCCCCCCC
GGGGGGGGGGGGGCCCCCCCCACCCAAAACCGGGTGGGGGAAAGAAAAAT
TGTCGTGGGGGGGCGGGCCACGACCACACCCACAAAAAATAAGTAGGAGA
GGCCCGCGCCTCCCCCTCCCTCAAAATAAAAAAAACAAATAGGCGACCCA
CCCCCCCCACCCCATGTTGGT

Query= MSMg01no527_h01.b1 MSMg01no527_h01.b1 CHROMAT_FILE:
MSMg01no527_h01.b1 PHD_FILE: MSMg01no527_h01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:02:40 2005
         (636 letters)



>mm_chr5_96583087_96584122
          Length = 1036

 Score = 1189 bits (615), Expect = 0.0
 Identities = 626/630 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctgtactaaatggaaattgctagtcatttggttactatgacaaaatagccaagag 64
           ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 828 gaattctgtacaaaatggaaattgctagtcacttggttactatgacaaaatagccaagag 769

                                                                       
Query: 65  aaacaaaggagagaaaatttattttagctcatgatttgaaacgtttcaatccatagttga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 aaacaaaggagagaaaatttattttagctcatgatttgaaacgtttcaatccatagttga 709

                                                                       
Query: 125 ttggttccatatttttggaccatggcaaggcagagaaaagctgttctttagagtgtttag 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 708 ttggttccatatttttggaccatggcaaggcagagaaaagctgttctttagagtatttag 649

                                                                       
Query: 185 gaagctgagatgaggtgggaacaagacatatccttccaggtatgccctcaatgacacact 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 gaagctgagatgaggtgggaacaagacatatccttccaggtatgccctcaatgacacact 589

                                                                       
Query: 245 tcctccacttggacccatttccgaatttttaccacttcccaccccaatcatgacatcaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tcctccacttggacccatttccgaatttttaccacttcccaccccaatcatgacatcaaa 529

                                                                       
Query: 305 ttattagtagaatctattagtagattaatccactgatgagttgaaagtcctcatgacatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ttattagtagaatctattagtagattaatccactgatgagttgaaagtcctcatgacatc 469

                                                                       
Query: 365 ttcctgtagcccatcagctgctaactaagcctttcatacagagcctgcagaggacatttc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 ttcctgtagcccatcagctgctaactaagcctttcatacagagcctgcagaggacatttc 409

                                                                       
Query: 425 agactcagagcataataataaaccttgaaatagggtaaaattgtttcagatttgaaaatt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 agactcagagcataataataaaccttgaaatagggtaaaattgtttcagatttgaaaatt 349

                                                                       
Query: 485 tttaatcaggaaatgtattacctagctgggtgtctaagtttacttttcaattgctgtgaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tttaatcaggaaatgtattacctagctgggtgtctaagtttacttttcaattgctgtgaa 289

                                                                       
Query: 545 gaactccttctcacatgaccaagacaacttanacggcatggtggtagatagaggcaggtg 604
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 288 gaactccttctcacatgaccaagacaacttaaacggcatggtggtagatagaggcaggtg 229

                                         
Query: 605 gatctctgcttttgaggctagcctactcta 634
           ||||||||||||||||||||||||||||||
Sbjct: 228 gatctctgcttttgaggctagcctactcta 199


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1036
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1026
Effective search space:   642276
Effective search space used:   642276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)