NGTAGACTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCCTACGCCTGACAAACCTCTTCAATGAAGTAGCTGGATAT
AAAATTAACCCAAAGAAGTCAATGGCCTTTCTCTACACAAAGGATAAAAA
GGCTGAGGAAGAAATTAGGGAAACAACTTTCTTCTCAATAGTCACAAATA
ATATAAAATAAGTTGGCATGACTCTAACTAAGGAAGTGAAAGATCTGCAT
AATAAGAACTTCAAGTCTCTGAAGAAAGAAATTAAAGATCTCAGAAGATG
GAAAGATCTCCCATGCTCATGGATTGGCAGGATCAATATAGTAAAAATGG
CTATCTTGCCAAAAGCAATCTACAGATTCAATGCAATCCCCATCAAAATT
CCAACTCAATTCTTCAATGAATTAGAAAGTGTAATCTGCAAATTCATCTG
GAGTAACAACAAACCTAGGATAGCAAAAATTCTGCTCAAGGATAAAAAAA
TCTCTGGTGGAATCACCATGTCTGACCTAAAGCTTTACTAAAGAGCAATT
GTGATAAAAACTGCATGGTACTAGTATAGCAACAGAAAAATAGACCGATG
GAATAGAATTGAAGACCTAGAAATGAACCCACACACCTATGGTCACTTGA
TATTTGATAAAGGAGCAAAAACCATCCAGTGGGAAAAGGACAGCATCTTC
AAAAAATGGTGCTGGCACAACTGGCGGTTAAGTAGAAGAAA

NNCCACGATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTGTCACTGTATTTTAATTGG
GTTATTTTTTTTAATATCTAGTTTCTTGAGTATATATATAAACATTAGAC
CTTTGTCAGATGTGAAGTTAGTGAGATAATTCTGTAGCTGCTGCTTTTTC
CAGTTGACAGTGTGCTGTGCCTTACAGAAGCTTTTCAGTTTCATGATGTA
TCATTTATTAATTGTTGAATCTAACTCATAGGCACTAATATAATACTTAT
TTAATATTTAGTTTATTATTATCTTTTATTAATTTGTTTTCTTAATAACA
AAACAAAGCAAAATTAAAAATGGGGCTAGCTACATGACAAATTTGGTCTT
GAACTTACAATCTTTCTTCCTACTATCTCAATATGGAAGATTTTAGCACT
ATGCTTGCCACTTAAATGGTACTATTGTATTTGTCTATGTGTTTATACAG
TAGGCCTTAACATCATATACTAAAATAAGATAATCAGAAAAATTCTAAAC
ATTCAATTTTGGTACAAAATTATCTTATACAATAAATAAAACCTGTCTGT
GGGATATGTTCCTCTAGCTGGGCTGCCTTGTCTGGTCTCAGTCAGAGATG
ATGTTCCTAGCCCTGCAGGGACTTAATACACCAGGGTGTGGGGACACCTA
GAGAAGCCTCCACCATCTCAAAGGAGAAGGGGACAGGGTGTGGG

Query= MSMg01no530_i12.g1 MSMg01no530_i12.g1 CHROMAT_FILE:
MSMg01no530_i12.g1 PHD_FILE: MSMg01no530_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:06:53 2005
         (642 letters)



>mm_chr5_83120771_83121812
          Length = 1042

 Score = 1129 bits (584), Expect = 0.0
 Identities = 637/678 (93%), Gaps = 36/678 (5%)
 Strand = Plus / Minus

                                                                        
Query: 1    tctgtcactgtattttaattgggttattttttttaatatctagtttcttgag-------- 52
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||        
Sbjct: 1006 tctgtcactgtattttaattgggatattttttttaatatctagtttcttgagtatatata 947

                                                                        
Query: 53   ----------------------------tatatatataaacattagacctttgtcagatg 84
                                        ||||||||||||||||||||||||||||||||
Sbjct: 946  tatatatatatatatatatatatatatatatatatataaacattagacctttgtcagatg 887

                                                                        
Query: 85   tgaagttagtgagataattctgtagctgctgctttttccagttgacagtgtgctgtgcct 144
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886  tgaagttagtgagataattctgtagctgctgctttttccagttgacagtgtgctgtgcct 827

                                                                        
Query: 145  tacagaagcttttcagtttcatgatgtatcatttattaattgttgaatctaactcatagg 204
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826  tacagaagcttttcagtttcatgatgtatcatttattaattgttgaatctaactcatagg 767

                                                                        
Query: 205  cactaatataatacttatttaatatttagtttattattatcttttattaatttgttttct 264
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766  cactaatataatacttatttaatatttagtttattattatcttttattaatttgttttct 707

                                                                        
Query: 265  taataacaaaacaaagcaaaattaaaaatggggctagctacatgacaaatttggtcttga 324
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706  taataacaaaacaaagcaaaattaaaaatggggctagctacatgacaaatttggtcttga 647

                                                                        
Query: 325  acttacaatctttcttcctactatctcaatatggaagattttagcactatgcttgccact 384
            ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 646  acttacaatctttcttcctactatctcaatatggaggattttagcactatgcttgccact 587

                                                                        
Query: 385  taaatggtactattgtatttgtctatgtgtttatacagtaggccttaacatcatatacta 444
            ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 586  taaatggtactattgtatttgtctatgcgtttatacagtaggccttaacatcatatacta 527

                                                                        
Query: 445  aaataagataatcagaaaaattctaaacattcaattttggtacaaaattatcttatacaa 504
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526  aaataagataatcagaaaaattctaaacattcaattttggtacaaaattatcttatacaa 467

                                                                        
Query: 505  taaataaaacctgtctgtgggatatgttcctctagctgggctgccttgtctggtctcagt 564
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466  taaataaaacctgtctgtgggatatgttcctctagctgggctgccttgtctggtctcagt 407

                                                                        
Query: 565  cagagatgatgttcctagccctgcagggacttaatacaccagggtgtggggacacctaga 624
            |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406  cagagatgattttcctagccctgcagggacttaatacaccagggtgtggggacacctaga 347

                              
Query: 625  gaagcctccaccatctca 642
            |||||||||||| |||||
Sbjct: 346  gaagcctccaccctctca 329


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space:   652224
Effective search space used:   652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)