This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
Click to search
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search by nearby gene name.
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Search Result
BAC
Clone Name
MSMg01-533A07
Chromosome
5 (Build37)
Map Location
84,690,965 - 84,691,632
singlet/doublet
singlet
Overlap gene
Epha5
Upstream gene
Srd5a2l2
,
LOC100039608
,
LOC231368
,
LOC100039489
Downstream gene
none
Link
Open Mouse BAC browser
Click to get alignment info.
name
Srd5a2l2
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:243078
MGI:2444966
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100039608
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039608
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins
pseudo
: _no_value
name
LOC231368
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:231368
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins
pseudo
: _no_value
name
Epha5
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:13839
MGI:99654
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100039489
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100039489
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins
name
Srd5a2l2
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:142347128
GeneID:243078
MGI:2444966
definition
exception
: mismatches in transcription
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: steroid 5 alpha-reductase 2-like 2
transcript_id
: NM_153801.2
name
Epha5
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:111154064
GeneID:13839
MGI:99654
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: Eph receptor A5
transcript_id
: NM_007937.2
name
LOC100039489
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149253984
GeneID:100039489
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins
product
: similar to Hmgn2 protein
transcript_id
: XM_001473104.1
name
Srd5a2l2
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:24418917
CCDS:CCDS19375.1
GeneID:243078
MGI:2444966
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]
codon_start
: 1
exception
: mismatches in translation
note
: synaptic glycoprotein SC2-like
product
: steroid 5 alpha-reductase 2-like 2
protein_id
: NP_722496.1
name
Epha5
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:111154065
CCDS:CCDS19376.1
GeneID:13839
MGI:99654
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
GO_function
: GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]
GO_process
: GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA]
codon_start
: 1
note
: eck-like sequence 1
product
: Eph receptor A5
protein_id
: NP_031963.2
name
LOC100039489
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149253985
GeneID:100039489
definition
codon_start
: 1
product
: similar to Hmgn2 protein
protein_id
: XP_001473154.1
name
LOC100039608
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039608
definition
number
: 1
pseudo
: _no_value
name
LOC100039608
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039608
definition
number
: 2
pseudo
: _no_value
name
LOC100039608
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:100039608
definition
number
: 3
pseudo
: _no_value
name
LOC231368
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:231368
definition
number
: 1
pseudo
: _no_value
name
LOC231368
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:231368
definition
number
: 2
pseudo
: _no_value
clone name
MSMg01-367M02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-049H10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-463E14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-430N22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103H15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-456J23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-382P03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-422H10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-466O11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206G23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486H14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-545C10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405G16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-383C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-267F07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-487I18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388K06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-394K16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-141M02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-083K10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-124I04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-350C15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-456L04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-488I13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-470P08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-356E14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-149D09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-207I16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-085L06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-274F04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-206P09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-381P01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164E02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-181P04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-438N05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-277K04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-232B21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316C11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-306C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-306D08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-370J09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-460I14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-486H08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-102C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-312O06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521L12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-415L06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-062L08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-093L23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-454C06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-132A07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-416K17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-289C21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-059J12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-116K14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-528D16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-526O11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522J08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-400N14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-379O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372K08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-476E19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-520K20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-507L06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-533A07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-183M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108D24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-340L12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-363D04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-157A01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-413B05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-416M20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-213D01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-047P15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455L02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189M06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-262L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-164M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-059F13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-405C21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-393P23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-101J24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-365L21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-213M14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-404C17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-458A02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-377G07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-268N19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-373H08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-294N23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-452O08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-189F02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-491L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-529N02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-164L18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499M17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-343P04
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-301J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455A17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-337I15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316C17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-046O06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-477K14
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-137J19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-191D02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-090P18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-484O04
singlet/doublet
singlet
plural/unique
plural
clone name
B6Ng01-186A09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212A21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-172E01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-261C16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-288J18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-110G08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-150L06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-326F04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-279D17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-127N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-154L09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-280P24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247A23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-308J04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100H08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-088A02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-313C11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160D01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-298O22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-340C03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-322L12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212F12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-339O05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005P18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-027O15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-162D16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-136D24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-341E07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-004F02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-073H09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-075P04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-180O08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-041N24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-010I01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-057A18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-074O18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-216A17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236N24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-078H23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-152C24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186B03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-063B24
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297I18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-010G02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-289C22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-160H04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-337G17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-202J24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-005N23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-126L21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-237E19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-212A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-053H02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-302M17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203H06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-103M24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-243N16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-323M13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-021L17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-294K16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-129B09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-016F08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-224N17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-309N08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321E17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-046M19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-329N08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-169E20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-074H22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-288L02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-230G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-134M05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274A08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-250C23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-160K03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-091K11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-347K09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-111O20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-010A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-141I23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-307J11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-027P07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-172B02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-031B16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-249G02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-206F01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-207G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-166I20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-054P14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-084H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-204E06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-108O12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-268G03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-090O08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185F18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-177F10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-020N07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-074J24
singlet/doublet
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clone name
B6Ng01-325O22
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B6Ng01-296N01
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B6Ng01-038E02
singlet/doublet
doublet
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clone name
B6Ng01-166E14
singlet/doublet
singlet
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unique
clone name
B6Ng01-093O23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-051F01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286H12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-263D23
singlet/doublet
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plural/unique
unique
clone name
B6Ng01-344K08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-265P12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-312H06
singlet/doublet
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plural/unique
unique
clone name
B6Ng01-251P22
singlet/doublet
singlet
plural/unique
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clone name
B6Ng01-330M08
singlet/doublet
singlet
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unique