CCTTTTATATCAAAAATTGTGGCCGCTATACGACTCTCTATTTCGAGAGG
ATCCGCGGAATTCTATGATATCCGCTGAGAGTCCCACTATGGGGCAGAAT
TCCTAGCGCTATCTCATCTGTTGAGCCTTCTCCAGCCTGGAAACGGTCTT
TCGTGAACCCAGCTGATCAAGCTCAACTGCATCATTCAGATTCTCACATC
CATTTTTTTAAAAATTTGTTTTTGAGACAGAACTTTTTTGGTAGCCCAGG
CTTGCCTGAAATTTATCATACAGCCCAGGCTGATTCAGAACTTAGTCCTT
CCATCTGTCTCCTGAGTGCTGGAATTATGGGTGTGAACCCACAGCTTGCT
CTCCAAACCAAACCCTTTTACTTGATCAGTTTCCACATGTCACATGTCAA
AATATCCTCTTGTAATGATAAAATTGTCTTTCAGTCTTTGTTTTAAAGCA
CCAGGCTGTAAGTGTGTGTGTGTGCACTATGGGGAAATAATATCTATTTT
ATTCATATATAAACATACACACACACACACTAAATGTTAACTACTGCAGA
GTGTTTTGTTAGCACCGATACAATAATACCTTCGAAATCCATTACCTGAA
ATGAGGCTTAACTCACTACAGGGAATAGTGTACAGCCACCAAGTACAATA
AGCCGCTCTTATTGGTGTGGCGCGGGCTTGTTTATTCTTTCCCCCCCCCC
TATTCCCTTGTTTGCCCCTTCCCCGTCCT

NCCAATGCTATGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXATGGATAAAGGTGCTTGCTGCCAAC
CCTGAAGAATGCACCAAAGATGGATTCCTGGGCCCTACTTGAGGAAAGGG
AGAAAGTTGTCTTCTGACCTCTACTCTGGCCAAGGCTGGTTCTGAACTTG
CGATTCTTCTGCCATACTTGGTTGTATGTGGTGCTGGGGCTCAAACTCAG
GGCTCTGTGTATGCTGGGCAAATACATTACTACCGAGCTATAGCCCCAAT
GGGCAATTCACCTTTTAATAGAAAGTGAAGCGTAAACAGTGCCAGATTTG
TGTTGGTGACTGAAGTAGCTGCATTCAACTCTTGCAAGGCACATTCATGC
AGGCAGGACCCTGTGTGCTCGCCTATCCTGTGTTCAGAGGGCCGCGGGGA
AACCGTAGGAATGGAATTCAGCAGCTGGAGAAGGCACTTTAATTCAGCAG
CTGGAGAAGGCACTTTGAGCTAGGCTGTAGAAAGTAAGAGACCCTGACCA
CACCACAAGAGCATATCTTTAGATAACCGAAACTGGAGAAAAACCAAACT
GGGGCAGTATGAATGTGTGCATGGGGCTTCGATGTGGGAATGGGTTTCTC
TGAGATTTTTTTAAAAGGAATTTTTATATCAACAACCAGGAATCCAATAA
AACTCTATCTTCTCCTAAGGCCCTGGTAGTTTGAAGGATCTAGGG

Query= MSMg01no533_g12.g1 MSMg01no533_g12.g1 CHROMAT_FILE:
MSMg01no533_g12.g1 PHD_FILE: MSMg01no533_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:10:36 2005
         (560 letters)



>mm_chr5_107718629_107719588
          Length = 960

 Score = 1036 bits (536), Expect = 0.0
 Identities = 554/560 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatggattcctgggccctacttgaggaaagggagaaagttgtcttctgacctctactctg 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 gatggattcttgggccctacttgaggaaagggagaaagttgtcttctgacctctactctg 881

                                                                       
Query: 61  gccaaggctggttctgaacttgcgattcttctgccatacttggttgtatgtggtgctggg 120
           |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 880 gccaaggctggttctgaacttgtgattcttctgccgtacttggttgtatgtggtgctggg 821

                                                                       
Query: 121 gctcaaactcagggctctgtgtatgctgggcaaatacattactaccgagctatagcccca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 gctcaaactcagggctctgtgtatgctgggcaaatacattactaccgagctatagcccca 761

                                                                       
Query: 181 atgggcaattcaccttttaatagaaagtgaagcgtaaacagtgccagatttgtgttggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 atgggcaattcaccttttaatagaaagtgaagcgtaaacagtgccagatttgtgttggtg 701

                                                                       
Query: 241 actgaagtagctgcattcaactcttgcaaggcacattcatgcaggcaggaccctgtgtgc 300
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 700 actgaagtagctgcattcaactcttgcaaagcacattcatgcaggcaggaccctgtgtgc 641

                                                                       
Query: 301 tcgcctatcctgtgttcagagggccgcggggaaaccgtaggaatggaattcagcagctgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 tcgcctatcctgtgttcagagggccgcggggaaaccgtaggaatggaattcagcagctgg 581

                                                                       
Query: 361 agaaggcactttaattcagcagctggagaaggcactttgagctaggctgtagaaagtaag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 agaaggcactttaattcagcagctggagaaggcactttgagctaggctgtagaaagtaag 521

                                                                       
Query: 421 agaccctgaccacaccacaagagcatatctttagataaccgaaactggagaaaaaccaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 agaccctgaccacaccacaagagcatatctttagataaccgaaactggagaaaaaccaaa 461

                                                                       
Query: 481 ctggggcagtatgaatgtgtgcatggggcttcgatgtgggaatgggtttctctgagattt 540
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ctggggcagaatgaatgtgtgcatggggcttcgatgtgggaatgggtttctctgagattt 401

                               
Query: 541 ttttaaaaggaatttttata 560
           |||| |||||||||||||||
Sbjct: 400 tttttaaaggaatttttata 381


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space:   522500
Effective search space used:   522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)