GCGGGGGCGTGCGGTGCCGGTTTGGGCGTATTGGAAGCGGTCTGTTAGTC
TGAAGTGCGCTGCGATTGAGCGGTGTGAATGTCTACGAGCCACCGTAATA
CACGAAGATATTGCAACTTGCTTACATCCGCGTACTCAAAGAGCATTCTA
CACGGAACCACAATATATCCCTAGTCGACGTCCTCTGTGCGTGTAACAGA
GCGCGAGCGTCCTCGCGGGTCCGGCTCCACGCCGCGCCCCTATCATGTGT
CCATACCACACGATACGAGGGGAAGGGACGTATACGGTGTATTAGCTATA
CATGTCACGGGTGTGGGTTATGCACAAAGTATAAGATGTATGTGCGTACA
AATCGACAGTGAGACGGACAGCGTCGAGTGTTGCGATGTAGGCGTCTTGA
TCGCACGACAAACCTATACTTCTATATTCGTCCGCGCGGGATGGCACCGC
GTTAATGTCATACTAATTACTATACAGCTATACGAATACTAAATTGGCGT
AAATATCATATGATCCNACGATAATAAAATATTGGTTCGACCCGATTCAC
CGCCCTCACGCACTCCGATATATGTCCCCGCGCTCCCTCAACTTGTATTA
TCAGCACGTACGGGGATATTATATATTATACTACGTACATTATGACTCGT
ACTCCACCCGTTGTGGATTGTGACCGAGCCGTGATATGCGCAGACCATAT
GGTCGCGGTAGTACGCCATACTGCCCGACGCGTAGTGGTTCGCGCCGGCG
GAACACCAGTCGCCATCCACATATGATTTATCCACGCGGCGGCCACATAC
CCCCCGAGCTATGGAGAAGGTCATTATCGTAAACGTACGATAAATTTATA
TGCGTTCAGCGAAGAGTGGCTGGGCAGGACCGTACCCCTGCGAGTACGCG
CCCCATATATGACCACTCATCGACGACACATTGACGTATTACACTACCAC
CGGTCTTATCCACTGAAACCAGTGGTACAGGCGGATGTGGCGCTGGGATG
TCGAGATCGGCCGCAAGCTATCGTGGGCCGCCCCAATAGAACACACCACG
CATCGATACCTGTATGTATATCGCACGCTCACCATTGCGGACAGCGAGCG
GATCTGCCTCATAAGATAAGATGATTACGTCGTAGCGGCGTTAAGACGGG
ATATAATAGCACCCTGGATCGCATGGCCACCGGGTCGATACCGATATTAT
CTGGTCTGCGTTCGCGCGCATTG

ACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTAGTACAGTCAGAGCAATATAGTGAGACC
TGCTTCTAAATGAACAAAGGACAGAAAGAAGGAAAGAAAAGAAAAGAGAA
AGAAAAGAAGAAAAAAACTCATCCATAGAATTTTTAATGAATGTAAATAG
GACAATTATTTTTAAATACTCCAGATGATCACAATGTAAATATATGTCAG
AAAATGAATGGATAAAAATGATACATAATACATCCATATAATGCAGTAAT
ATACAACAATAAAATTTTAAATTTTTTTGAAAAGTTATAACATTGATAAT
ATTCACAGATATGTTTACAAAGAGAACTTATTTGTATATCTAAAGAGACA
ACTCAGAGGATACAACACTTGATACACAAGGTGAGATACAATAGGGTTTG
ATCCCTTTGCCTTTAGAACAATAGAGTAGGCAAGACAACCTACTAATAAT
CCCAGCTTGTGGCAGGCAGTGACAGAGCCCAGATCAAGGATAAATCAGTG
AGAATCTTGACTCAACCCATAGTGTGGAGAGTGATCAAGGAAGATACCTG
GCATCAACTTTGTGGATACACACTCCTGTACATACATAGTCATCTACACA
TACACAAAGACTCATCCCATATGAACAAGCATAGACTCACACATACTGTA
CATATATACATACATGAAAAAAGATAGGCACATAAAACTCTATATTATAT
TAAATGAATTGA

Query= MSMg01no534_f09.g1 MSMg01no534_f09.g1 CHROMAT_FILE:
MSMg01no534_f09.g1 PHD_FILE: MSMg01no534_f09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:11:49 2005
         (638 letters)



>mm_chr5_12951191_12952228
          Length = 1038

 Score = 1137 bits (588), Expect = 0.0
 Identities = 627/642 (97%), Gaps = 4/642 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtacagtcagagcaatatagtgagacctgcttctaaatgaacaaaggacagaaagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 tagtacagtcagagcaatatagtgagacctgcttctaaatgaacaaaggacagaaagaag 861

                                                                       
Query: 61  gaaagaaaagaaaagagaaagaaaagaagaaaaaaactcatccat----agaatttttaa 116
           |||||||||||||||||||||||||||||||||||||||||||||    |||||||||||
Sbjct: 860 gaaagaaaagaaaagagaaagaaaagaagaaaaaaactcatccatagaaagaatttttaa 801

                                                                       
Query: 117 tgaatgtaaataggacaattatttttaaatactccagatgatcacaatgtaaatatatgt 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tgaatgtaaataggacaattatttttaaatactccagatgatcacaatgtaaatatatgt 741

                                                                       
Query: 177 cagaaaatgaatggataaaaatgatacataatacatccatataatgcagtaatatacaac 236
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cagaaaatgaatggataaaaatgatacataatacatccatataatgcagtaatatacaac 681

                                                                       
Query: 237 aataaaattttaaatttttttgaaaagttataacattgataatattcacagatatgttta 296
           |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||
Sbjct: 680 aataaaattttaaatttttttgaaaagttataacattgataatcctcacagatatgttta 621

                                                                       
Query: 297 caaagagaacttatttgtatatctaaagagacaactcagaggatacaacacttgatacac 356
           ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||
Sbjct: 620 caaagagaacttatttgtatatctaaagagacaactcagagaataaaacacttgatacac 561

                                                                       
Query: 357 aaggtgagatacaatagggtttgatccctttgcctttagaacaatagagtaggcaagaca 416
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 560 aaggtgagatacaatagggtttgatccctttgcctttagaacagtggagtaggcaagaca 501

                                                                       
Query: 417 acctactaataatcccagcttgtggcaggcagtgacagagcccagatcaaggataaatca 476
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 500 acctactaataatcccagcttgtggcaggcagtgacagagcccatatcaaggataaatca 441

                                                                       
Query: 477 gtgagaatcttgactcaacccatagtgtggagagtgatcaaggaagatacctggcatcaa 536
           |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gtgagaatcttgactcaaaccatagtgtggagagtgatcaaggaagatacctggcatcaa 381

                                                                       
Query: 537 ctttgtggatacacactcctgtacatacatagtcatctacacatacacaaagactcatcc 596
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 380 ctttgtggatacacactcctgtacatacatagtcatctatacatacacaaagactcatcc 321

                                                     
Query: 597 catatgaacaagcatagactcacacatactgtacatatatac 638
           |||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 320 catatgaacaagcatagaatcagacatactgtacatatatac 279


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space:   645584
Effective search space used:   645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)