NACCCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCAACAACTCTCTTAAAGAAATACAGGAGAACACTGCTAA
AGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACACTGCTAAAGAGTTAC
AAGTCCTTAAAGAAAAACAGGAAAACACAACCAAACAGGTAGAAGTCCTT
ATAGAAAAACAGGAAAACACATCCAAACAGGTGATGGAAATGAACAAAAC
CATACTAGACCTAAAAAGGGAAGTAGACACAATAAAGAAAACCCAAAGTG
AGGCGACGCTGGAGATAGAAACCCTAGGAAAGAAATCTGGAACCATAGAT
GCCAGCATCAGCAACAGAATACAAGAGATGGAAGAGAGAATCTCAGGTGC
AGAAGACTCCATAGAGAACATCGGCACAACAATCAAAGAAAATGGAAAAT
GCAAAAAGATCCTAACTCAAAACATCCAGGAAATCCAGGACACAATGAGA
AGACCAAACCTACGGATAATAGGAGTGGATGAGAATGAAGATTTTCAACT
CAAAGGACCAGCAAACATCTTCAACAAAATTATTGAAGAAAACTTCCCAA
ATCTAAAGAAAGAGATGCCCATGAACATACAAGAAGCCTACAGAACTCCA
AATAGACTGGACCAGAAAAGAAATTCCTCCCGACACATAATAATCAGAAC
ACCAAATGCACTAAATAAAGATAGAATACTAAAAGCAGTAAG

ATGGCCCGATGATAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTATATACTGGGTTTCTTG
TTTTTCTCTAAAAGGTAGTGACATGATCATCTGCAGTGAGTGAAGCAGGG
AGGAGCAATAAAATGGAAGTTAAATGCTTGTTGGCTAGCTTCTGTGGTGA
TTAAACAAGGAACTTAACGGAGTGATGAAAAATTATTGTGTAGCTGTGCA
GACTTTGCGAAATGGGTAAAAGCATATCTATTGTGTCATAATTTTCACAG
TTTCATAATTTGCTCAGCATAAAAAAAAACAGCTTGTGTCAACCTAAATT
AGAGAACAGATAGTTGTAGCGATGCAGACGAACATTAATTGGTTACCTAC
ATGGATTTCTAGCTTGGGACCCAAGTCTAAGTGTTCATCTGAAACTTCAG
GAGTGGGTATCTTAGGGACTTCTAAAAGGAATACAAAATATTTGTTTATA
TAGAGAAATTTATGGAGAGACAATAATAACGCAGTTTACATTTGATATTA
AAGTGTTTTCAATAAAAAAAAAATTAGACTGAAGATTAAGCTGGAGAGAT
ATCTCAGTGCTTAAAAGCACTTTCTTCCATTGCATAGGATCAAGGTTTGA
TTGCAAGTCACCACCATCATCTGTAATTCCAGTCTCAATGCATCTGATGC
TCTAGACTGGTATCTTCTAGACTATACGTATATAGTACA

Query= MSMg01no537_n16.g1 MSMg01no537_n16.g1 CHROMAT_FILE:
MSMg01no537_n16.g1 PHD_FILE: MSMg01no537_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:20 2005
         (555 letters)



>mm_chr5_51811754_51812705
          Length = 952

 Score = 1031 bits (533), Expect = 0.0
 Identities = 549/555 (98%), Gaps = 3/555 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttatatactgggtttcttgtttttctctaaaaggtagtgacatgatcatctgcagtgagt 60
           |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 705 ttatatactgtgtttcttgtttttctctaaaaggtaatgacatgatcatctgcagtgagt 646

                                                                       
Query: 61  gaagcagggaggagcaataaaatggaagttaaatgcttgttggctagcttctgtggtgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gaagcagggaggagcaataaaatggaagttaaatgcttgttggctagcttctgtggtgat 586

                                                                       
Query: 121 taaacaaggaacttaacggagtgatgaaaaattattgtgtagctgtgcagactttgcgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 taaacaaggaacttaacggagtgatgaaaaattattgtgtagctgtgcagactttgcgaa 526

                                                                       
Query: 181 atgggtaaaagcatatctattgtgtcataattttcacagtttcataatttgctcagcata 240
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| 
Sbjct: 525 atgggtaaaagcatatctattgtgtcataatttttacagtttcataatttgctcagcat- 467

                                                                       
Query: 241 aaaaaaaacagcttgtgtcaacctaaattagagaacagatagttgtagcgatgcagacga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 aaaaaaaacagcttgtgtcaacctaaattagagaacagatagttgtagcgatgcagacga 407

                                                                       
Query: 301 acattaattggttacctacatggatttctagcttgggacccaagtctaagtgttcatctg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 acattaattggttacctacatggatttctagcttgggacccaagtctaagtgttcatctg 347

                                                                       
Query: 361 aaacttcaggagtgggtatcttagggacttctaaaaggaatacaaaatatttgtttatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaacttcaggagtgggtatcttagggacttctaaaaggaatacaaaatatttgtttatat 287

                                                                       
Query: 421 agagaaatttatggagagacaataataacgcagtttacatttgatattaaagtgttttca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 agagaaatttatggagagacaataataacgcagtttacatttgatattaaagtgttttca 227

                                                                       
Query: 481 ataaaaaaaaaattagactgaagattaagctggagagatatctcagtgcttaaaagcact 540
           ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 at--aaaaaaaattagactgaagattaagctggagagatatctcagtgcttaaaagcact 169

                          
Query: 541 ttcttccattgcata 555
           |||||||||||||||
Sbjct: 168 ttcttccattgcata 154


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 952
Length adjustment: 10
Effective length of query: 545
Effective length of database: 942
Effective search space:   513390
Effective search space used:   513390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)