Query= MSMg01no538_f02.b1 MSMg01no538_f02.b1 CHROMAT_FILE:
MSMg01no538_f02.b1 PHD_FILE: MSMg01no538_f02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:56 2005
(623 letters)
>mm_chr5_74729449_74730471
Length = 1023
Score = 1197 bits (619), Expect = 0.0
Identities = 619/619 (100%)
Strand = Plus / Minus
Query: 5 gaattcctaatgggaaggctcacagacttcagacagaggcttgactgctatgcaaaagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 gaattcctaatgggaaggctcacagacttcagacagaggcttgactgctatgcaaaagtc 764
Query: 65 tccttgcaaatctatttttcatcaaaaccagactactgcagtgagagtgattgaaaatga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tccttgcaaatctatttttcatcaaaaccagactactgcagtgagagtgattgaaaatga 704
Query: 125 gccctgctgtgaacatttgagcatcagtaaagtaaaatacaggagcccaattatcaatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gccctgctgtgaacatttgagcatcagtaaagtaaaatacaggagcccaattatcaatca 644
Query: 185 gaaaaggatctgagaaatcacagttgcctttacagttgaggctgagccatgataaggcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 643 gaaaaggatctgagaaatcacagttgcctttacagttgaggctgagccatgataaggcaa 584
Query: 245 aaagtcatgcccagagacggctgcagtcccgtgcagtcctcttcagattcgtgcaaggat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 aaagtcatgcccagagacggctgcagtcccgtgcagtcctcttcagattcgtgcaaggat 524
Query: 305 ttgcctgtggcccagagctagattccagtgggtgccagtaaataacgtagtaaataccac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 ttgcctgtggcccagagctagattccagtgggtgccagtaaataacgtagtaaataccac 464
Query: 365 tcagaaaacaccacttttctagacttgtgttcatttttttgttttcagaagtatctcctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 tcagaaaacaccacttttctagacttgtgttcatttttttgttttcagaagtatctcctc 404
Query: 425 cacatattgttcttattaagaaaaattctgggaaacatgcagctcttctagagtcaattt 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 cacatattgttcttattaagaaaaattctgggaaacatgcagctcttctagagtcaattt 344
Query: 485 atgtttccaattaattttcaaaaagcattacatttacagcctgatgttggccagcactct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atgtttccaattaattttcaaaaagcattacatttacagcctgatgttggccagcactct 284
Query: 545 ttcaaaaatccatggcaaaaaccattttattttcactgaatgcaatcttcataaaatttc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttcaaaaatccatggcaaaaaccattttattttcactgaatgcaatcttcataaaatttc 224
Query: 605 agtattctggcttacagtt 623
|||||||||||||||||||
Sbjct: 223 agtattctggcttacagtt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no538_f02.g1 MSMg01no538_f02.g1 CHROMAT_FILE:
MSMg01no538_f02.g1 PHD_FILE: MSMg01no538_f02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:16:56 2005
(433 letters)
>mm_chr5_74551832_74552664
Length = 833
Score = 760 bits (393), Expect = 0.0
Identities = 423/433 (97%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 1 acagtgtgttaactgaccaacaatgcacacagagcttgtttttagtgcccatctgtctag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acagtgtgttaactgaccaacaatgcacacagagcttgtttttagtgcccatctgtctag 260
Query: 61 ggaggagagagcagtggaggccgggaaaggccagatgggaatgattagaagggacaggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggaggagagagcagtggaggccgggaaaggccagatgggaatgattagaagggacaggtg 320
Query: 121 gttggagcaggtcttgacgatcaggggtcactgagcgaggtcctaagatatatatcttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttggagcaggtcttgacgatcaggggtcactgagcgaggtcctaagatatatatcttgg 380
Query: 181 actggcttgaatgctatgcaccagtgacgaaatgatggtctgcacagcggagaggctgag 240
||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 381 actggcttgaatgttatgcaccagtgacgaaatgatggtctgcacagtggagaggctgag 440
Query: 241 aacctggcagctgcttagttcatgaagctgggcacctcagccagtcccagtctgtggcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacctggcagctgcttagttcatgaagctgggcacctcagccagtcccagtctgtggcag 500
Query: 301 aagccctggagggttccaggtcttcagttcacatagaaaggctgagcaggctagagtctg 360
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 501 aagccctggagggttccaggtcttcagttcacatcggaaggctgagcaggctagagtctg 560
Query: 361 ataaaagtgacatcactgaaagcggcagcagtgtggacatactccccggtgaccaccaaa 420
||| ||||||||||||||||||||||||||| |||||||||||| ||||||||||| |||
Sbjct: 561 atataagtgacatcactgaaagcggcagcagcgtggacatactcaccggtgaccactaaa 620
Query: 421 ggctggagggggg 433
||| || ||||||
Sbjct: 621 ggccgg-gggggg 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
