CAAGACCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCTCACCTTTTGCATACCGAATGGCAGAGAAGCACCTGAAAAA
ATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGA
GATTCCACCTCACACCAGTCAGAATGGCTAAGATTAAAAATTCAGGTGAC
AGCAGATGCTGGCATGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTG
GTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCAGTTCC
TCAGAAAATTGAACATAGTACTACCAGAGGATCCAGCAATACCTCTCCTG
GGCATATATCCAGAAGATTCCCCAACTGGTAAGAAGGACACTTGCTCCAC
TATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACA
ATGGAATACTACTCAGCTATTAAAAAGAATGAATTCATGAAATTCCTAGC
CAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACACTCAC
AAAGGAACTCACAAAATATGTACTCACTGATAAGTGGATATTAACCCAAA
ACCTAGGATACCCAAGATATAAGATACTTTTTCCCTAAGCCATTGAAACT
CAAGAATAATGAACACTGGACTGTG

TACACCATGCTGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCCCAGAAAATCAGAACAGGTTTTGTTGAGTGATTT
CACTAATTGTTTTGAAAGTTGACAAAATCTCTAATTTTAAAATGTCCAGA
TGCTGCTGTAGAGACGTTTGCTTTTTTCATCATTTTTATTCTCACTGACA
CCTTTTCCATCACTTATCTTTATTTTGTTCTAACTTTTGAGCTTAAAATA
CACCTACAACACTTTGCCTATTTTCTCTCTCAAAGCCCTCTTAGATCCCC
TTCAAGTACATGGTTCTTTTGTTCCATTAATTCTTATTGTATGCTTATAT
GTACAATGGTGTTGCTATGAATATTTGGGGGGGCTGGCCACCGGGGATCT
GGGCAACCAATTGGAGAAGGATGTTCAAGATCTGTCCACATGGAAAATGT
GGAGAACTTGTATCCTTACAGGGCTGGACACTGGCAATTAGACCATGCTC
TGTGGCAACACTTATTGGACTTGAGATGTTTGTTTGTCTGTCTCCTTTTT
GCTTGCCCTTTTTCAGGGGAAAGAACACAAGGCTGGTAGGGTGGACCTGA
AAGGTTGAGAAGCAAGGGTAATCACTTGTCTGAAATTGCATGACATTCCC
AAATAACTAATAACAATATTACCCTTGGGAAAAACAGAACAAAAATAAGC
GAACCAATAATTAAATAAATGGTTTT

Query= MSMg01no540_g04.g1 MSMg01no540_g04.g1 CHROMAT_FILE:
MSMg01no540_g04.g1 PHD_FILE: MSMg01no540_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:38 2005
         (449 letters)



>mm_chr5_61833857_61834704
          Length = 848

 Score =  799 bits (413), Expect = 0.0
 Identities = 440/449 (97%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacaggttttgttgagtgatttcactaattgttttgaaagttgacaaaatctctaatttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacaggttttgttgagtgatttcactaattgttttgaaagttgacaaaatctctaatttt 260

                                                                       
Query: 61  aaaatgtccagatgctgctgtagagacgtttgcttttttcatcatttttattctcactga 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 aaaatgtccagatgctgctgtagagacgtttgctgttttcatcatttttattctcactga 320

                                                                       
Query: 121 caccttttccatcacttatctttattttgttctaacttttgagcttaaaatacacctaca 180
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccttttctatcacttatctttattttgttctaacttttgagcttaaaatacacctaca 380

                                                                       
Query: 181 acactttgcctattttctctctcaaagccctcttagatccccttcaagtacatggttctt 240
           |||||||||||||||| ||||||||||||||||||||||||||||||||||||||  |||
Sbjct: 381 acactttgcctattttttctctcaaagccctcttagatccccttcaagtacatggc-ctt 439

                                                                       
Query: 241 ttgttccattaattcttattgtatgcttatatgtacaatggtgttgctatgaatatttgg 300
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 ttgttccattaattcttattgtatgcttatatgtacaatggtattgctatgaatatttgg 499

                                                                       
Query: 301 gggggctggccaccggggatctgggcaaccaattggagaaggatgttcaagatctgtcca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gggggctggccaccggggatctgggcaaccaattggagaaggatgttcaagatctgtcca 559

                                                                       
Query: 361 catggaaaatgtggagaacttgtatccttacagggctggacactggcaattagaccatgc 420
           |||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 560 catggaaaatgtggagaacttgtatccttacagggctggacactggcagtaagaccatgc 619

                                        
Query: 421 tctgtggcaacacttattggacttgagat 449
           ||| |||||||||||||||||||||||||
Sbjct: 620 tctttggcaacacttattggacttgagat 648


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space:   367882
Effective search space used:   367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)