NNCCCAATAGTTTGGGGCGGTXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTACCAGACTTTCAAAGAAGAGGTAATACCAATACTTATCAAA
CTATTCCACAAAGTAGAAATAGAAGGAACACTATGTAATTTAATCCATGA
AGCCACAGATACCCTGATACCTAAAGTAGACAAAGACTAAACAAAGACAG
AGAACTTCAGACAAATTTCACTTATGAACATCGATACAAAAATACTCAAT
AAAATTTTCCCAAACTGAATACAAGAACACATTAAAACCAGCATTCACCA
CAATCAAGCTTCATCCCAGAGATGCAAGCATGGTTCAATATACGAAAATC
CACCAATGTAATCTGCTGTATAAACAAACTCAAAGAAAAATATCAAATTA
TGATCATCTTATTGGATGCTGAAAAAGGCTTCAAAAAATCCATACCCCTT
CATGTTAAAAGTCCTGAAAAAGCAGCATTTCGAGACACATATCTGCACAT
AATAAAAGCAATACATGGGAAGACAATAGCAACATCAAACTCATAGAGAG
AAACATGAGGCAATCCCACTAAAAATCAGGGACAAGACAAGGCAGACCAC
TCTCTCTTTCTATATTCAATATAGTACTTGAAGTTCTAGCTAGAACAATA
AGACAATGAAAGGAGATCAAGGGGATACAAATTTGAAAGGAAGAAATCAA
GTATCACTATTCATAGATCATATATATATATATGTATATATATATATGTA
TGGATATGTATATATCCCCACACG

NCCAATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXATGTTTTTAATATTAATATTAGC
CATAATACTCTGGAAACCAGGACCAAGGGAGCTGAATAATCCATGCTCCA
GCTAAAAAAAGTTAGGAGAATTCAGGCCAACTCTTCTCCATAATTTTGTT
GCTGTCCATTAATCATTGAGTTGGAAGATGAAAAATCTAACTGGAAAAAC
CCCTCTCTTAATATTCTATTAGTTTTCATGTTTACTTCTCTCAGAAATAC
ACTCTTTGACAGCTCTAGAAATAATACTTAATAAATCAGATTATCCCATA
GCTCAGTCAAGTTGAGATATAGGATTATCCAATATAAGATCAGCTTTTCT
CAACTTAGCACTCTTACATATTTTCTCAGGCAATATTTACTGTCTAATGA
GGAAAATATTATGTTTTTAAAGTTTTACTAAATTGAAATAAATATTCCAG
ATGAGAAATTAGTCTTCCAGTGGTATTTAGTCTTTATTTTTACATTCTGT
AATTTAAATATTATGACTTAAAATTAAAAGCACATAAATAATTTATTTAT
CTCATTCTACATGTCATTAGAATAAGACGACATAGAAGTGTCTGTTATCC
ATAATCTCATGGCAAGAATCATAATGGATGTAACATAGAATCAGCTTTGA
GGTCTATCAACAGATGAATGGATCAAGCAAATGTGGTATTTATAGAAAAA
GTAATCTCTTCAGCCN

Query= MSMg01no543_p23.g1 MSMg01no543_p23.g1 CHROMAT_FILE:
MSMg01no543_p23.g1 PHD_FILE: MSMg01no543_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:31 2005
         (666 letters)



>mm_chr5_48282344_48283409
          Length = 1066

 Score = 1201 bits (621), Expect = 0.0
 Identities = 633/637 (99%)
 Strand = Plus / Minus

                                                                        
Query: 30   actctggaaaccaggaccaagggagctgaataatccatgctccagctaaaaaaagttagg 89
            |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1066 actctggaaaccaggaccaagggagctgaataatccattctccagctaaaaaaagttagg 1007

                                                                        
Query: 90   agaattcaggccaactcttctccataattttgttgctgtccattaatcattgagttggaa 149
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 agaattcaggccaactcttctccataattttgttgctgtccattaatcattgagttggaa 947

                                                                        
Query: 150  gatgaaaaatctaactggaaaaacccctctcttaatattctattagttttcatgtttact 209
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946  gatgaaaaatctaactggaaaaacccctctcttaatattctattagttttcatgtttact 887

                                                                        
Query: 210  tctctcagaaatacactctttgacagctctagaaataatacttaataaatcagattatcc 269
            ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 886  tctctcagaaatacactctttgacagctctagaaataatacttaataaatctgattatcc 827

                                                                        
Query: 270  catagctcagtcaagttgagatataggattatccaatataagatcagcttttctcaactt 329
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 826  catagctcagtcaagttgagatatgggattatccaatataagatcagcttttctcaactt 767

                                                                        
Query: 330  agcactcttacatattttctcaggcaatatttactgtctaatgaggaaaatattatgttt 389
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766  agcactcttacatattttctcaggcaatatttactgtctaatgaggaaaatattatgttt 707

                                                                        
Query: 390  ttaaagttttactaaattgaaataaatattccagatgagaaattagtcttccagtggtat 449
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706  ttaaagttttactaaattgaaataaatattccagatgagaaattagtcttccagtggtat 647

                                                                        
Query: 450  ttagtctttatttttacattctgtaatttaaatattatgacttaaaattaaaagcacata 509
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646  ttagtctttatttttacattctgtaatttaaatattatgacttaaaattaaaagcacata 587

                                                                        
Query: 510  aataatttatttatctcattctacatgtcattagaataagacgacatagaagtgtctgtt 569
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586  aataatttatttatctcattctacatgtcattagaataagacgacatagaagtgtctgtt 527

                                                                        
Query: 570  atccataatctcatggcaagaatcataatggatgtaacatagaatcagctttgaggtcta 629
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 526  atccataatctcatggcaagaatcacaatggatgtaacatagaatcagctttgaggtcta 467

                                                 
Query: 630  tcaacagatgaatggatcaagcaaatgtggtatttat 666
            |||||||||||||||||||||||||||||||||||||
Sbjct: 466  tcaacagatgaatggatcaagcaaatgtggtatttat 430


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)