TGTGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGTGTCAATGGCTTTAGTCTTTTAATCTGGGCAAACTCACAG
GATTGGTTTATAATATTGCCCTTGAAATATCTCGATTTACTAATGGGAGA
AAAAGATTTCTATAAAAGAATAATACAACTGTTTGTGAAGTTTTAAATGT
AGTTTATGTGCTTTAAGAAGAAAATTAACTGGCCTATTTTTAAAATAAGT
AGCACTCTTTTTAAAAAATTAAATAAAGTCCTAAGACCAATCAGTGTATA
TCATTTAAGTGTGAAAGAAGTTAGCTTTTGTCATAATGTTGACCTTCAGC
ATTCTTCAATGTAAAATCTCCACTTAGGTCTTGGTAGTCATAGTAATACG
GACATCTCTTGGAGGTATTTGTGAGCCTTACTTCACGTGACTGATGTGTG
ATTTCAGCAAAGGCAACCTAACAGGGAATTGATTCTACATTGTAACGTCT
ACTTCATCAGCGTCCTTCAGCAGCCAACTCAGAATGGCATTCTGGGATGT
GAAGCAGCTGCACTGAAAACACTTGTTCCGAGACATTTTTCAATAAATGA
ATCGATGTGTTCATTTACAGTCTGGAGCAAGCTCACTAGAGCATGGTGGA
CGACTCACAAACTGTTAGCTACTGCCACTACTTGGTAACGACACTTTATA
TAGCAACTGTCCAAGGGAAGACAATTTAGAGCATTGCCACTATTA

NGAGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCCCGAAAATAAAGGCCTTGGTGACTGCCTGGT
TAAGATCTACAAATCTGATGGGATTAAGGGCCTGTACCAAGGCTTTAATG
TGTCAGTACAGGGCATTAACATCTACGGAGCTGCCTACTTTGGTATCTAT
GACACTGCAAAGGGAATGCTCCCAGATACCAAGAATACTCACATCTTCAT
CAGCTGGATGATTGCACAGTCTGTCACTGCTGTCGCTGGCCAGACTTCCT
ATCTTTTTTGACACGGTTCGCCGTCGTATGATGATGCAGTCTGGACGCAA
AGGAACTGATATCATGTACACAGGCACGCTTGACTGCTGGCAGAAGATCG
CGCGCGATGAAGGGAGCAAGGCTTTTTTCAAGGGCGCATGGTCCAACGTT
CTCAGAGGCATGGGTGGCGCCTTTGTGCTTGTCTTGTACGATGAGATCAA
GAAGTACACATAATTAAGTCCTAGGTGTTCTCCCCGAGAACGGGCATGTT
GTATGATATACCATATCTTGAACATTCTGGACAGACTCTCTGGGCTTGTC
TGTTTTATCAGTGGCAACTATTTACCAGTTGAAAAGTGAGAAGCAATAAT
ATTCATCTGACCAGTTTTCTCTTAAAGCCATTTCCATAATGACAATGATG
ATGGGACTCAATTATATTTTTTATTTCAGTCACTCCTGATAATAAAN

Query= MSMg01no544_a08.b1 MSMg01no544_a08.b1 CHROMAT_FILE:
MSMg01no544_a08.b1 PHD_FILE: MSMg01no544_a08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:33 2005
         (658 letters)



>mm_chr5_97840145_97841202
          Length = 1058

 Score = 1236 bits (639), Expect = 0.0
 Identities = 651/655 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcagtgtcaatggctttagtcttttaatctgggcaaactcacaggattggtttat 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggaattcagtgtcaaaggctttagtcttttaatctgggcaaactcacaggattggtttat 671

                                                                       
Query: 64  aatattgcccttgaaatatctcgatttactaatgggagaaaaagatttctataaaagaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 aatattgcccttgaaatatctcgatttactaatgggagaaaaagatttctataaaagaat 611

                                                                       
Query: 124 aatacaactgtttgtgaagttttaaatgtagtttatgtgctttaagaagaaaattaactg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 aatacaactgtttgtgaagttttaaatgtagtttatgtgctttaagaagaaaattaactg 551

                                                                       
Query: 184 gcctatttttaaaataagtagcactctttttaaaaaattaaataaagtcctaagaccaat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gcctatttttaaaataagtagcactctttttaaaaaattaaataaagtcctaagaccaat 491

                                                                       
Query: 244 cagtgtatatcatttaagtgtgaaagaagttagcttttgtcataatgttgaccttcagca 303
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| 
Sbjct: 490 cagtgtatatcatttaagtgtgaaagaagttagcttttgtcataatattgaccttcagcg 431

                                                                       
Query: 304 ttcttcaatgtaaaatctccacttaggtcttggtagtcatagtaatacggacatctcttg 363
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 430 ttcttcaatgtaaaatctccacttaggtcttggtagtcataataatacggacatctcttg 371

                                                                       
Query: 364 gaggtatttgtgagccttacttcacgtgactgatgtgtgatttcagcaaaggcaacctaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gaggtatttgtgagccttacttcacgtgactgatgtgtgatttcagcaaaggcaacctaa 311

                                                                       
Query: 424 cagggaattgattctacattgtaacgtctacttcatcagcgtccttcagcagccaactca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 cagggaattgattctacattgtaacgtctacttcatcagcgtccttcagcagccaactca 251

                                                                       
Query: 484 gaatggcattctgggatgtgaagcagctgcactgaaaacacttgttccgagacatttttc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gaatggcattctgggatgtgaagcagctgcactgaaaacacttgttccgagacatttttc 191

                                                                       
Query: 544 aataaatgaatcgatgtgttcatttacagtctggagcaagctcactagagcatggtggac 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aataaatgaatcgatgtgttcatttacagtctggagcaagctcactagagcatggtggac 131

                                                                  
Query: 604 gactcacaaactgttagctactgccactacttggtaacgacactttatatagcaa 658
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 gactcacaaactgttagctactgccactacttggtaacgacactttatatagcaa 76


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space:   679104
Effective search space used:   679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)