Query= MSMg01no545_c13.b1 MSMg01no545_c13.b1 CHROMAT_FILE:
MSMg01no545_c13.b1 PHD_FILE: MSMg01no545_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(647 letters)
>mm_chr5_147945770_147946816
Length = 1047
Score = 1230 bits (636), Expect = 0.0
Identities = 644/647 (99%)
Strand = Plus / Plus
Query: 1 aatggagccagcctcattcataaatgtcatatgaggcttcagattaaaaggaaactctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatggagccagcctcattcataaatgtcatatgaggcttcagattaaaaggaaactctgt 260
Query: 61 cattccagggacggcagctgttgttacgttgaacaaaatggatacaaatgggtattattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cattccagggacggcagctgttgttacgttgaacaaaatggatacaaatgggtattattt 320
Query: 121 taaactgaaatgcttaattttagacctaacaagcaagctgtccgctgtgcagccagagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taaactgaaatgcttaattttagacctaacaagcaagctgtccgctgtgcagccagagtc 380
Query: 181 acaggagtcgtggtccccagtagagggcttgattgcacaggaaatcaaactcccaggagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaggagtcgtggtccccagtagagggcttgattgcacaggaaatcaaactcccaggagc 440
Query: 241 tgctgaccaggccctgcaaacacactggcaatgtttgagttactatggcaatcacaaaat 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgctgaccaggcactgcaaacacactggcaatgtttgagttactatggcaatcacaaaat 500
Query: 301 aggaaggccttttcttctcttccccatctctgcatgcagcctcaggctgctcctgaatag 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 aggaaggccttttcttctcttccccatctctgcatgcagcctcgggctgctcctgaatag 560
Query: 361 gccacatctgcaaaaagttttaacacggtactcagataaagaaagggtccccaaaatggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gccacatctgcaaaaagttttaacacggtactcagataaagaaagggtccccaaaatggg 620
Query: 421 cactgacccgtctcaaaaaatgttgcaaattttacatacaagaattggggagctgggcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cactgacccgtctcaaaaaatgttgcaaattttacatacaagaattggggagctgggcca 680
Query: 481 ctttgggcaggttatgtcataatgcagacacaaagagatgaaagggcacgaggttttggc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctttgggcaggttatgtcataatgcagacacaaagagatgaaagggcacgaggttttggc 740
Query: 541 tgtcaggtcctgagaggaggggacagcagcagtcaatgacagcttanatgcagatgtaag 600
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 tgtcaggtcctgagaggaggggacagcagcagtcaatgacagcttaaatgcagatgtaag 800
Query: 601 gagaaaagtcagggcttggtgacaaaaagttactggtcaatgaatga 647
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gagaaaagtcagggcttggtgacaaaaagttactggtcaatgaatga 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space: 660569
Effective search space used: 660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_c13.g1 MSMg01no545_c13.g1 CHROMAT_FILE:
MSMg01no545_c13.g1 PHD_FILE: MSMg01no545_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:04 2005
(441 letters)
>mm_chr5_148021421_148022261
Length = 841
Score = 694 bits (359), Expect = 0.0
Identities = 395/407 (97%), Gaps = 1/407 (0%)
Strand = Plus / Minus
Query: 35 tccaattgttgaaggacccaaatgaagaccaagctgtacatctgctacacaagtgtcggg 94
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tccaattgttgaaggacccaaatgaagaccaagctgtacatctgctacacaagtgtcggg 782
Query: 95 ggacttggtctagccaatgtatgctctatggttggtggttcagtcttgtgagactccgtg 154
||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||
Sbjct: 781 ggacttggtctagccaatgtatgctctttggttggtggttcagtcctgtgagaccccgtg 722
Query: 155 ggcccaggttagttgactctgtgggtctttttgtggtgtccttgatatctccggttcccg 214
||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||
Sbjct: 721 ggcccaggttagttgactctgtgggtctttttgtgctgtccttgacatctccggtacccg 662
Query: 215 ttaacccttccccagactcttagcacctcagttctttctggtcttttgctgatttcttcc 274
|| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 661 -tagcccttccccagactcttagcacctcagttctttctgatcttttgctgatttcttcc 603
Query: 275 accagctgtggtgattctgggtagtctttcacttcctgcctgctgtaagcttgtatccca 334
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 602 accagctgtggtgattctgggtagtctttcacctcctgcctgctgtaagcttgtatccca 543
Query: 335 gggtagactttccccttgtaccctgataggcagaccacgtgtgcttgagcaatgcttatc 394
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 542 gggtagactttccccttgcaccctgatgggcagaccacgtgtgcttgagcaatgcttatc 483
Query: 395 gagtaagcatagctgggaggagacgccagagttcctacagccttcag 441
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagtaagcatagctgggaggagacgccagagttcctacagccttcag 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 441
Length of database: 841
Length adjustment: 9
Effective length of query: 432
Effective length of database: 832
Effective search space: 359424
Effective search space used: 359424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
