XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCT
ACATATAAGACTTAAAGTTTCAAATAAGCTTCTTCATCCATGCATAGATG
AAATTGTTAAGCCCTTGCCTTTTACCATCCCCAAATTCTTTTCTTTTCAA
GTTTTGCTTCATTTTAAATATGCCCAAAATGTCTTGAATTGCCAGAAAAG
AAGACGATTCTTTGTCTGTTCTTTAGGAATAGAAGATAGTGTTCAGATTT
CACAGTGGCTTTGTACAAAAAGCTAGTGTACTTAGTGAGGAAAAAAGAAA
AACCTTTCTGGTCCCCTTTGAATGAGAAAATATTTGCACCATATATGTAG
CCGTATTTCAGCAACAGCAGCACATCACTAATTAGCCAATTCTTTTCAAG
AGAGAATAAAATCAGTGCTTCTGAACTACAAACCTATCATCAGACATTTA
ATAGCTAAAAAAAATCCCTTGTCTTCATGATATCCATATGTGATATATGA
TATCTTTTAAGTGATCTTGGGAAAATTAAAATATTGTGATTCAAAGTATT
ATTTTGACAACAAAGAGTACATTTTCCCTCAACCAAGAATCATTTCTCTG
GGAATACTCTATTTTATATTTTCTCTGGAGATTTTTTTTTTCAACAAGCT
TTTAAAACAGATGCTGAGCTAGAAACCAATTCTAGAAATAAAGAAAGCCA
AGGGGAAAAATAATAATAATAGACAGTTGTACTTGATTGN

GGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXACCATTTCAGTCCTTCTTAGAAGGGGGATCAACATA
CCCATGGGAGGAGATACAGAGACAAAGTTTGCAGTAGAAATGGAAGGAAA
GGTCAGCCAGTGACTGTCCCACCTGGGGATCCATCCCATATACAGTTAAA
CCCAGACACTTATTGTGAATGCCAACAAGTGCTTGGTGACAGGAGCCTGA
TTTGCCTGTCTTCTGAGAGGCTCTGCCAGTGCCTGACAAATACAGAAGTG
GATGCTCACAGCCATCCATTGTACTGAGCACAGGGTCCCTAATGGAGGAG
CTAGAGAAAGGACCCAAGGAGCTGAAGGGGTTTGCAACCCCTTAGGAAGA
ACAACAATATGAACCAACCAGTACCCCCAGAGCTCCCAGGGACTAAACCA
CCAACCAAAGAGTACACATGGAGGGACACAAGACTCCAGCTGCATATGTA
ACAGAGGATGGCCTTGTGGGACATTAATGAAAGGAGAAGCCCTTGGTCTT
GTGAAGACTTGATGCCCCAGTGTAGGGGAACGCCAGGACAGGGAACCGGG
AGTAGGGAGTAGGTAGATTAATGAGCAGGGGAAGGGAGGATGGGGATATG
AAGGNTTTNTTTTTNTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
NTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTN

Query= MSMg01no547_k16.b1 MSMg01no547_k16.b1 CHROMAT_FILE:
MSMg01no547_k16.b1 PHD_FILE: MSMg01no547_k16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:21 2005
         (637 letters)



>mm_chr5_86026369_86027404
          Length = 1036

 Score = 1180 bits (610), Expect = 0.0
 Identities = 628/634 (99%), Gaps = 3/634 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctacatataagacttaaagtttcaaataagcttcttcatccatgcatagatga 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctctacataaaagacttaaagtttcaaataagcttcttcatccatgcatagatga 264

                                                                       
Query: 65  aattgttaagcccttgccttttaccatccccaaattcttttcttttcaagttttgcttca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aattgttaagcccttgccttttaccatccccaaattcttttcttttcaagttttgcttca 324

                                                                       
Query: 125 ttttaaatatgcccaaaatgtcttgaattgccagaaaagaagacgattctttgtctgttc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttaaatatgcccaaaatgtcttgaattgccagaaaagaagacgattctttgtctgttc 384

                                                                       
Query: 185 tttaggaatagaagatagtgttcagatttcacagtggctttgtacaaaaagctagtgtac 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttaggaatagaagatagtgttcagatttcacagtggctttgtacaaaaagctagtgtac 444

                                                                       
Query: 245 ttagtgaggaaaaaagaaaaacctttctggtcccctttgaatgagaaaatatttgcacca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttagtgaggaaaaaagaaaaacctttctggtcccctttgaatgagaaaatatttgcacca 504

                                                                       
Query: 305 tatatgtagccgtatttcagcaacagcagcacatcactaattagccaattcttttcaaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatatgtagccgtatttcagcaacagcagcacatcactaattagccaattcttttcaaga 564

                                                                       
Query: 365 gagaataaaatcagtgcttctgaactacaaacctatcatcagacatttaatagctaaaaa 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagaataaaatcagtgcttctgaactacaaacctatcatcagacatttaatagctaaaaa 624

                                                                       
Query: 425 aaatcccttgtcttcatgatatccatatgtgatatatgatatcttttaagtgatctt-gg 483
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 625 aa-tcccttgtcttcatgatatccatatgtgatatatgatatcttttaagtgatctttgg 683

                                                                       
Query: 484 gaaaattaaaatattgtgattcaaagtattattttgacaacaaagagtacattttccctc 543
           ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 684 gaaaattaaaatattatgattcaaagtattattttgacaacaaagagtacgttttccctc 743

                                                                       
Query: 544 aaccaagaatcatttctctgggaatactctattttatattttctctggagattttttttt 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aaccaagaatcatttctctgggaatactctattttatattttctctggagattttttttt 803

                                             
Query: 604 tcaacaagcttttaaaacagatgctgagctagaa 637
            |||||||||||||||||||||||||||||||||
Sbjct: 804 -caacaagcttttaaaacagatgctgagctagaa 836


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space:   643302
Effective search space used:   643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)