Query= MSMg01no547_p16.b1 MSMg01no547_p16.b1 CHROMAT_FILE:
MSMg01no547_p16.b1 PHD_FILE: MSMg01no547_p16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:46 2005
(674 letters)
>mm_chr5_67592798_67593871
Length = 1074
Score = 1249 bits (646), Expect = 0.0
Identities = 664/670 (99%)
Strand = Plus / Plus
Query: 5 gaattcagaagaccactctgggaagcacttgctgagccctcatgatgtggggcttgagat 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagaagaccacactgggaagcacttgctgagccctcatgatgtggggcttgagat 264
Query: 65 ttcatagccttgtaagacactgaggatgagagagaactatggggtgagctggaggtaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcatagccttgtaagacactgaggatgagagagaactatggggtgagctggaggtaagc 324
Query: 125 ctgccccccccaaaaaaaaggatgaagaaaactatctttcttaaaccctggcactgagtg 184
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 325 ctgcccccccccaaaaaaaggatgaagaaaactgtctttcttaaaccctggcactgagtg 384
Query: 185 gaggataggagagatggctacaccgggagagtttataatcacaagtccatcctcataaga 244
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaggataggagagatgactacaccgggagagtttataatcacaagtccatcctcataaga 444
Query: 245 gtcaagactagaattccacaaacaaggaatggcttcaaccaacgagctaaacctccttgc 304
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 445 gtcaagactagaattccacaaacaaggaatggcttcaaccagcgagctaaacctccttgc 504
Query: 305 tagaaacttaattttctaatctatgtctctcagagaacaagaaaccctccactgaacccg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagaaacttaattttctaatctatgtctctcagagaacaagaaaccctccactgaacccg 564
Query: 365 atccaccttaaagacaaactggtccattccggtcccatctataacacagcatcatcattc 424
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 565 atccaccttaaagacaaactggtccattccggtcccatctataacacagcatcaccattc 624
Query: 425 tcaggaatacagagatagctgtctgggttagcaactaggttctctgactatacgaaagag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tcaggaatacagagatagctgtctgggttagcaactaggttctctgactatacgaaagag 684
Query: 485 gcgaaaaccggagaaccaggctttcttttgttcatcgacttccttggttgggaggttcca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcgaaaaccggagaaccaggctttcttttgttcatcgacttccttggttgggaggttcca 744
Query: 545 gccttttcaggctatcgcctcacagtggcttagaaaagtctgcacggagtggatgagaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gccttttcaggctatcgcctcacagtggcttagaaaagtctgcacggagtggatgagaca 804
Query: 605 gtgcgaggtgcctcagttgatggagaaaagtggggccaatggggttttccctatttcttt 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gtgcgaggtgcctcagttgatggagaaaagtggggccaatggggttttccctatttcttt 864
Query: 665 cttattatcg 674
||||||||||
Sbjct: 865 cttattatcg 874
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no547_p16.g1 MSMg01no547_p16.g1 CHROMAT_FILE:
MSMg01no547_p16.g1 PHD_FILE: MSMg01no547_p16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:29:46 2005
(614 letters)
>mm_chr5_67781907_67782921
Length = 1015
Score = 621 bits (321), Expect = 0.0
Identities = 356/369 (96%), Gaps = 5/369 (1%)
Strand = Plus / Minus
Query: 1 tctggtccatgatgttggaaattatctgacctagtaaggtggatagggagcagcctgtca 60
|||||||| |||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 567 tctggtccgtgatgtcggaaattatctgacctagtaaggtggatggggagcagcctgtca 508
Query: 61 ggtctaggagcgacatgggaagtccccgaagctgcagctcacaatccctcaactgcacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ggtctaggagcgacatgggaagtccccgaagctgcagctcacaatccctcaactgcacag 448
Query: 121 gtcttggccatgtgtggtatttgaccagtgtgctgagcatagaagcacatcggctgtggt 180
||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||
Sbjct: 447 gtcttggccgtgtgtggtatttgaccagtgtgctgagcgtagaagcacatcagctgtggt 388
Query: 181 taagtagggacatggttgtggcttccactttctgcaggaagtgtctgacatgaccactac 240
|||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct: 387 taagtagggacatggttgtggcttccactt--tgcagtaagtgtctgacatgaccactac 330
Query: 241 agaagtgcaggattgaacgagccttatttcacgagccagattaaatcaaaag--aca-tt 297
|||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||
Sbjct: 329 agaagtgcaggattgaacgagccttatttcacgagccagattaaatcaaaagctaaagtt 270
Query: 298 tcatgtcccaggaaatcaaagggggttttatttttgctctcaagattcaaaattttaacc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tcatgtcccaggaaatcaaagggggttttatttttgctctcaagattcaaaattttaacc 210
Query: 358 aattttttt 366
|||||||||
Sbjct: 209 aattttttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1015
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1005
Effective search space: 607020
Effective search space used: 607020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
