BAC Information

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BAC

Clone NameB6Ng01-002D22
Chromosome6 (Build37)
Map Location 146,612,639 - 146,613,772
singlet/doubletsinglet
Overlap genenone
Upstream geneRassf8, Bhlhb3, Sspn, Itpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175
Downstream geneStk38l, LOC621842, Arntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893, Klhdc5, EG665288, LOC100039641, Pthlh, EG622129, Ccdc91, LOC100039712
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002D22.bB6Ng01-002D22.g
ACCDH840325DH840326
length1,126369
definitionDH840325|Mus musculus domesticus DNA, BAC clone: B6Ng01-002D22, 5' end.DH840326|Mus musculus domesticus DNA, BAC clone: B6Ng01-002D22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaggatgtgaaggactcatacaaaccacatctacctgctgaga
ggagagatgccttcccccacagaattagccagacgcttcaaaagtctgct
tattatctggactcaagatgagcaaaggtcacatggttcttttttgttga
gctggagacagaggttcgtggactccagccaagcgctctgcctctgggct
gtctctagcactctgtatgactgggactcaagatcatctgaccttgaact
catcctacagtccaggcaaaccttgaatttgtgatcctcttgcctcaaac
tgggataaaggctgtgccacctcgttcagcttgaggactctttccaagtt
acagctttctcctgccggagctcaaaatgtaagaaagtctctagacagac
agttataatagatagttaaatatagataaactggctcagtagaatagaca
gtttttaaattatggttctcactcagcacacagtgaaggcattgttacgg
aaagcaaatctgtcccaaaccaaaaccaaacaacaggcaccgcatccgca
ggacccagccgaggtcctgacccagtgtggtctctctgacacctgctcct
tccaacgcttcagcctgtaagatatcacagcacatcctcgctttcccaag
agtgttgctgtgagagccttctcccctacccaggctaacgctcgctctat
ttattgcatggattattctcacctccctggtttgtgcttgttacttctaa
caacagcgggtgcacaggaatttaggaaggcttttctaggcccgagatgg
aagttcatggtcaggttttagggtttttggttttttgttgttgttgttgt
tgtttttgttttttcccatttttggctaaataaagcaattggaagagtct
ctaagcatgcacgctgtgcagagttcatgacttgtgtggtgattcagcat
tgacttttatccttcatggttttccggaaatcatacagttaccgagaaac
cataaacactgctatgagcccttataggacctcatttgggatatgaaggt
cggaccttactatggttctcctatatctttcttcttttagatgggaccag
agttgcaactcgtaggccaggttccc
tggggactctggagagggtataaaaaggccggagccctgagagtctgcag
tggctgctggtccctgctgcttgttttgctgtttgctgcttgttttgctg
tttgctgattgcttttgctgtttgatggctagagatatcatgacaatgaa
gattagacccgcccccccccaggacctcgatgcccctaagcagcaggaag
aagtctaacaaggtccatgctccctttcgcctcccaccttctttctcact
acctagtcttgggggttggaaggaattggggtggagaagggtagtagatg
ttagaactcaataaagtaaccaagggtgtggcaagtggaactgtgtcacc
agattaattaactgggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_146612639_146613772
seq2: B6Ng01-002D22.b_43_1167

seq1  GAATTCTCAGGATGTGAAGGACTCATACAAACCACATCTACCTGCTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGATGTGAAGGACTCATACAAACCACATCTACCTGCTGAGA  50

seq1  GGAGAGATGCCTTCCCCCACAGAATTAGCCAGACGCTTCAAAAGTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGCCTTCCCCCACAGAATTAGCCAGACGCTTCAAAAGTCTGCT  100

seq1  TATTATCTGGACTCAAGATGAGCAAAGGTCACATGGTTCTTTTTTGTTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTGGACTCAAGATGAGCAAAGGTCACATGGTTCTTTTTTGTTGA  150

seq1  GCTGGAGACAGAGGTTCGTGGACTCCAGCCAAGCGCTCTGCCTCTGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGACAGAGGTTCGTGGACTCCAGCCAAGCGCTCTGCCTCTGGGCT  200

seq1  GTCTCTAGCACTCTGTATGACTGGGACTCAAGATCATCTGACCTTGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGCACTCTGTATGACTGGGACTCAAGATCATCTGACCTTGAACT  250

seq1  CATCCTACAGTCCAGGCAAACCTTGAATTTGTGATCCTCTTGCCTCAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCTACAGTCCAGGCAAACCTTGAATTTGTGATCCTCTTGCCTCAAAC  300

seq1  TGGGATAAAGGCTGTGCCACCTCGTTCAGCTTGAGGACTCTTTCCAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAAAGGCTGTGCCACCTCGTTCAGCTTGAGGACTCTTTCCAAGTT  350

seq1  ACAGCTTTCTCCTGCCGGAGCTCAAAATGTAAGAAAGTCTCTAGACAGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTCTCCTGCCGGAGCTCAAAATGTAAGAAAGTCTCTAGACAGAC  400

seq1  AGTTATAATAGATAGTTAAATATAGATAAACTGGCTCAGTAGAATAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATAATAGATAGTTAAATATAGATAAACTGGCTCAGTAGAATAGACA  450

seq1  GTTTTTAAATTATGGTTCTCACTCAGCACACAGTGAAGGCATTGTTACGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAAATTATGGTTCTCACTCAGCACACAGTGAAGGCATTGTTACGG  500

seq1  AAAGCAAATCTGTCCCAAACCAAAACCAAACAACAGGCACCGCATCCGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATCTGTCCCAAACCAAAACCAAACAACAGGCACCGCATCCGCA  550

seq1  GGACCCAGCCGAGGTCCTGACCCAGTGTGGTCTCTCTGACACCTGCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCAGCCGAGGTCCTGACCCAGTGTGGTCTCTCTGACACCTGCTCCT  600

seq1  TCCAACGCTTCAGCCTGTAAGATATCACAGCACATCCTCGCTTTCCCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACGCTTCAGCCTGTAAGATATCACAGCACATCCTCGCTTTCCCAAG  650

seq1  AGTGTTGCTGTGAGAGCCTTCTCCCCTACCCAGGCTAACGCTCGCTCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTGCTGTGAGAGCCTTCTCCCCTACCCAGGCTAACGCTCGCTCTAT  700

seq1  TTATTGCATGGATTATTCTCACCTCCCTGGTTTGTGCTTGTTACTTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCATGGATTATTCTCACCTCCCTGGTTTGTGCTTGTTACTTCTAA  750

seq1  CAACAGCGGGTGCACAGGAATTTAGGAAGGCTTTTCTAGGCCCGAGATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCGGGTGCACAGGAATTTAGGAAGGCTTTTCTAGGCCCGAGATGG  800

seq1  AAGTTCATGGTCAGGTTTTAGGGTTTTTGGTTTTTTGTTGTTGTTGTTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCATGGTCAGGTTTTAGGGTTTTTGGTTTTTTGTTGTTGTTGTTGT  850

seq1  TGTTTT--GTTTTTCCCATTTTTGGCTAAATAAAGCAA-TGGAAGAGTCT  897
      ||||||   ||||||||||||||||||||||||||||| |||||||||||
seq2  TGTTTTTGTTTTTTCCCATTTTTGGCTAAATAAAGCAATTGGAAGAGTCT  900

seq1  CCAAGGCATGCACGCTGTGCAGAGTTCAGGACTTGTGTGGTGATTCAGCA  947
      | || ||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTAA-GCATGCACGCTGTGCAGAGTTCATGACTTGTGTGGTGATTCAGCA  949

seq1  TTGACTTTTAACCCTCATGGTTTTCCGGAAAATCATACAGTTACCGAGAA  997
      |||||||||| || |||||||||||||| |||||||||||||||||||||
seq2  TTGACTTTTATCCTTCATGGTTTTCCGG-AAATCATACAGTTACCGAGAA  998

seq1  AACCAATATAACACTGGCTTTGAGCCC-AATAGGTACACATTGGGATTAT  1046
      |  | ||| |||||| ||| |||||||  |||||  | |||| ||  |||
seq2  A--CCATA-AACACT-GCTATGAGCCCTTATAGGACCTCATTTGGGATAT  1044

seq1  GAAAGGCGGGACCTTACTGTGTGTCTCCTATTATCTTTTCCTCCTTTTAG  1096
      | ||||  |||||||||| ||  ||||||| |||||||  || |||||||
seq2  G-AAGGTCGGACCTTACTATGGTTCTCCTA-TATCTTT--CTTCTTTTAG  1090

seq1  ATGGGACCCAGAGGTTGCAAACCGTAGGCCAGTGTTCC  1134
      |||||| ||||| |||||||  |||||||||| |||||
seq2  ATGGGA-CCAGA-GTTGCAACTCGTAGGCCAG-GTTCC  1125