BAC Information

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BAC

Clone NameB6Ng01-002I01
Chromosome6 (Build37)
Map Location 106,869,739 - 106,870,533
singlet/doubletsinglet
Overlap genenone
Upstream geneCntn4, Il5ra, Trnt1, Crbn
Downstream genePpia-ps6_1128.1, Lrrn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002I01.bB6Ng01-002I01.g
ACCDH840505DH840506
length1,0701,045
definitionDH840505|Mus musculus domesticus DNA, BAC clone: B6Ng01-002I01, 5' end.DH840506|Mus musculus domesticus DNA, BAC clone: B6Ng01-002I01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccattttttagtagggttatttgatt
ttctggagtctaccttcttgagttctttatatatattggatattagtccc
ctatttgatttaagataggtaaagatcctttcccaaactgttggtggcct
ttttgtcttatgccttacagatggtgtcttttgccttacagaagctttgc
aattttatgaggtcccatttgtcaattctcgatcttacagcacaagccat
tgctgttctattcaggaacttttcccctgtgcccatatcttcgaagcttt
tccccactttctcctctataagtttcactgtctctggttttatgtggagc
tccttgatccacttagagttgaccttagtacaaggagataggaatggatc
aattcgcaatcttctacatgataaccgccagttgtgccagcaccatttgt
tgaaaatgctgtcttttttccactggatgattttagctcccttgtcaaag
atcaagtgactataggtgtgtgggttcatttctgggtcttcaattctatt
tcattggtctacttgtctgtcactataccaataccatgcagtttttatca
aaattgctctgtagtacatctttaggtcaggcagggtgattccaccagag
gttcttttatccttgagaagagttttttgctatcctaggttttttgttat
tccagatgaatttgcagattgccctttctaattcgttgaagaattgagtt
ggaattttgatggggattgcattgaatctgtagattgcttttggcaagat
agccatttttactatattatcctgcccatcatgagcatgggagatctttt
acatcttctgagatcttcttaaatttctttcttcagagacttgaatttat
atctggtgaagagcgggtgtggcagcagttccaaaaatagttgacttggg
acttcaagctaagtcttatgacttgcaactgacttcctcatacacctgaa
aataatcctcatccttcatgagacttcgcatggtgccaccatgaatgcag
aatcggactatatgaacact
gaattcttcacccattcctcctcccttctgagaggatgccctaccgtggg
catcttccttccctgggacatcaagtctctacaagattagccatcccaca
ctgaggtcagataaggcagtcctttgttatataagtgctgagggcctcag
atgagcccatgtatgtgtatgcactttggctggtggcttagtctctggga
gatcccaggggtcgaggttaattcaagttcggccagccattggttggcca
ttcctttggtctttgctccatttttgtccctgcatttcatttagacaggg
acaattctggatcaaaaaattgaaggtgggttggcatccccatccctctt
gggggccctgtctaactactggagatggtcaggttccatctccccacagt
tgggcattttggctaaggtcatctacattgagtcctgtgaacctctcaca
tcccaggtctctgggacattctagaggtttcccctgctgccccacccctg
cagctgcatatttctactcattttccttgccctctgagtttcgcttctgt
ctccctccccaatacctgatcctgcttccttccccctcctacccagatcc
ctccttccttctgcctcccatgattatttttgttctcccttctaagtggg
attgaagcatcctcacttgggcgtgggggacttttgggatagcattggga
aatgcaaatgaaataaatacctaatttaaaaaaaaaaagaatggggggaa
agcactcagtgagagacaaagcttctaggaaataaaccaagtgtgcacta
acttctaaaaggaagaagagaatggagaggaagaaatgcacgcacccact
cccacgcacccactcccactttctggccctggcgaaacacagaaagcttg
agggtgtgtgtgttggaagaatgtctttgtattgaattagggtcttatga
aattcctcattacggtttgtatagagaagtctctgggcaaagatataatt
cttcctttcttcattttccctagagcattggaaaaagtctttctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_106869739_106870533
seq2: B6Ng01-002I01.g_314_1112

seq1  GCCATTCCTTTGGTCTTTGCTCCATTTTTGTCCCTGCATTTCATTTAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCCTTTGGTCTTTGCTCCATTTTTGTCCCTGCATTTCATTTAGAC  50

seq1  AGGGACAATTCTGGATCAAAAAATTGAAGGTGGGTTGGCATCCCCATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAATTCTGGATCAAAAAATTGAAGGTGGGTTGGCATCCCCATCCC  100

seq1  TCTTGGGGGCCCTGTCTAACTACTGGAGATGGTCAGGTTCCATCTCCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGGCCCTGTCTAACTACTGGAGATGGTCAGGTTCCATCTCCCCA  150

seq1  CAGTTGGGCATTTTGGCTAAGGTCATCTACATTGAGTCCTGTGAACCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGGGCATTTTGGCTAAGGTCATCTACATTGAGTCCTGTGAACCTCT  200

seq1  CACATCCCAGGTCTCTGGGACATTCTAGAGGTTTCCCCTGCTGCCCCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCCCAGGTCTCTGGGACATTCTAGAGGTTTCCCCTGCTGCCCCACC  250

seq1  CCTGCAGCTGCATATTTCTACTCATTTTCCTTGCCCTCTGAGTTTCGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCTGCATATTTCTACTCATTTTCCTTGCCCTCTGAGTTTCGCTT  300

seq1  CTGTCTCCCTCCCCAATACCTGATCCTGCTTCCTTCCCCCTCCTACCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCCCTCCCCAATACCTGATCCTGCTTCCTTCCCCCTCCTACCCAG  350

seq1  ATCCCTCCTTCCTTCTGCCTCCCATGATTA-TTTTGTTCTCCCTTCTAAG  399
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  ATCCCTCCTTCCTTCTGCCTCCCATGATTATTTTTGTTCTCCCTTCTAAG  400

seq1  TGGGATTGAAGCATCCTCACTTGGGCGTGGGGGACTTTTGGGATAGCATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTGAAGCATCCTCACTTGGGCGTGGGGGACTTTTGGGATAGCATT  450

seq1  -GGAAATGCAAATGAAATAAATACCTAATTTAAAAAAAAAAAGAAT-GGG  497
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGAAATGCAAATGAAATAAATACCTAATTTAAAAAAAAAAAGAATGGGG  500

seq1  GGAAAGCACTCAGTGAGAGACAAAGCTTCTAGGAAATAAACCAAGTGTGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCACTCAGTGAGAGACAAAGCTTCTAGGAAATAAACCAAGTGTGC  550

seq1  ACTAACTTCTAAAAGGAAGAAGAGAATGGAGAGGAAGAAATGCACGCACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACTTCTAAAAGGAAGAAGAGAATGGAGAGGAAGAAATGCACGCACC  600

seq1  CACTCCCACGCACCCACTCCCACTTCTTGGCCCTGGCGAAACACAGAAAG  647
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  CACTCCCACGCACCCACTCCCACTTTCTGGCCCTGGCGAAACACAGAAAG  650

seq1  CTTGAGGGTGTGTGTGTTGGAAGAATGTCCTTGTATTAGATTAGGGTC-T  696
      ||||||||||||||||||||||||||||| |||||||  ||||||||| |
seq2  CTTGAGGGTGTGTGTGTTGGAAGAATGTCTTTGTATTGAATTAGGGTCTT  700

seq1  AAGAAATT-CTCAATAATGTTTGTAATAGAGAAGTCTCTGGGCAAAAGTT  745
      | |||||| |||| ||  |||||| |||||||||||||||||| |||| |
seq2  ATGAAATTCCTCATTACGGTTTGT-ATAGAGAAGTCTCTGGGC-AAAGAT  748

seq1  ACAATTCTTCCTTTC-TCATTTTCCCTAGAGCATTGAAAAAAGTCTTTCT  794
      | ||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  ATAATTCTTCCTTTCTTCATTTTCCCTAGAGCATTGGAAAAAGTCTTTCT  798

seq1  G  795
      |
seq2  G  799