BAC Information

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BAC

Clone NameB6Ng01-007P07
Chromosome6 (Build37)
Map Location 137,413,931 - 137,563,304
singlet/doubletdoublet
Overlap geneEps8
Upstream geneEG627022, LOC100043893, Atf7ip, 1100001H23Rik, LOC100043894, Gucy2c, Hist4h4, H2afj, Wbp11, BC049715, C030030A07Rik, Art4, Mgp, Erp27, Arhgdib, Pde6h, Rerg, Ptpro
Downstream geneStrap, Dera, 9830102E05Rik, Mgst1, Lmo3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007P07.bB6Ng01-007P07.g
ACCDH844376DH844377
length1,132894
definitionDH844376|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P07, 5' end.DH844377|Mus musculus domesticus DNA, BAC clone: B6Ng01-007P07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(137,413,931 - 137,415,091)(137,562,416 - 137,563,304)
sequence
gaattccccctgctttctagcaaggagcccttccgttacaccctggggaa
tgtctgatgcaatgtgctccaaatagctggcccacctcccagctcccaga
tctccagcctggtgcttggcacagggcacagagtcaggaaccatgcccag
gaccaaatatgatatgcatgttagccaactgggttatggagcatcaaata
taacatggagaactgcagacttgttttcagcagcttcatttgtatgtcca
agaaggaaattccagccacaatatctctctgactgttggccgtgtagagg
aggaaaaacttagtttttagagtcagtgaagggcttatcacgagatggcc
tgtcaatttttctcttatgagtcaattctcagagctgagcctgccactca
tttttaatccagtgacccatgtccatgttcaatcaataaaagattttgtg
actacttacgttaaacactaccttaagaacaatgaagaaccaattgccag
atcttaaaactagatttaaaactttgaatttgaattgggagaactgagca
gacacgtgtcaatgtccctccaatgtcttcttctgcctaaatctcagtcc
ttacctgctaactggggaggtgcagggtactatgtgtagcttcctacaga
tgctttgaatacagggcaggatccactcaggcaaggatggttttacacgg
gttcctcagggcaaggacagtttctttcttgtgtgctaaggccttatgct
aaaataatcatagtttattaactacaaaatagcactatggagctagaaca
tccactttccacctgctgacaggggaagcaagtaggtcaaggggcagacc
agcaaactttcagtacacatttgtcattgaaagttctgaggggctctggt
cctgcttgaaacggccaaagtgttacagctcttcagaaggaagcttgcag
gcaggtagctggggttccagtctcatctgctactgaagcagtgccatgcc
agcatcaagggcggtgcaaccaaggcatcaccaggtgaccatggcatgat
gcacaggtgagatgaaatgctgcaagatatgctcaatctgccagtgtcaa
gtcatgatatcttttggagaagaaatctccct
gaattcatctttcagtgtccgcagagactacttcagtttgcatttccctc
gaagtcactgaagtccgtgaaggtcaagtgtgttctctaaaacgctgtga
ggttttcttgtagccggcacatacaccttagtatcctctaggtcatctcc
aattacttatcctacctcacagtgtcaatgttgtgtaagcagctgatagg
ctgccttggcggaggaataaggaccagaaacattagtcaggatgttgttt
gcaacaatgtacttttcaatgtcgtttggatctgtggggggtggctgcat
ctgagaaatggagcgacaggctgggggatcatgggagaagacctgactgc
tgctcagcaatgaaggaaaggaaaggacggagcccaaggctgtgacattg
ggaatgaactgtggcgttgggtacgcaggagagactggtttaagcacttt
tggagcagagaatttaagagaagctaccacagctgttcaggtgccttcga
catgacaagtcttaaatgtcaacaaggaatgcctgaattcctaaaaacta
gaaaacaatgcattgactgaaagtcccagagggtcccctgtgagggcctc
cctctcacacacgcccctgtaagctgcaatttgctacagggtttctttcg
cctggcagctagccactggggatcaggctgagctgacctccacaggctga
tggactgttttgagagccagccagtggtgatggaatggagctgcatcccc
aaaggcctaaaggtgccagaagagggcatcatccttagtacttatagagc
ttagccatcttggaactctgacttaacactgaaattgaaacacttattac
tgatgcattttggttgatgacggtttctctcttttttttctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_137413931_137415091
seq2: B6Ng01-007P07.b_47_1178

seq1  GAATTCCCCCTGCTTTCTAGCAAGGAGCCCTTCCGTTACACCCTGGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCTGCTTTCTAGCAAGGAGCCCTTCCGTTACACCCTGGGGAA  50

seq1  TGTCTGATGCAATGTGCTCCAAATAGCTGGCCCACCTCCCAGCTCCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGATGCAATGTGCTCCAAATAGCTGGCCCACCTCCCAGCTCCCAGA  100

seq1  TCTCCAGCCTGGTGCTTGGCACAGGGCACAGAGTCAGGAACCATGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCTGGTGCTTGGCACAGGGCACAGAGTCAGGAACCATGCCCAG  150

seq1  GACCAAATATGATATGCATGTTAGCCAACTGGGTTATGGAGCATCAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAATATGATATGCATGTTAGCCAACTGGGTTATGGAGCATCAAATA  200

seq1  TAACATGGAGAACTGCAGACTTGTTTTCAGCAGCTTCATTTGTATGTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATGGAGAACTGCAGACTTGTTTTCAGCAGCTTCATTTGTATGTCCA  250

seq1  AGAAGGAAATTCCAGCCACAATATCTCTCTGACTGTTGGCCGTGTAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAAATTCCAGCCACAATATCTCTCTGACTGTTGGCCGTGTAGAGG  300

seq1  AGGAAAAACTTAGTTTTTAGAGTCAGTGAAGGGCTTATCACGAGATGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAAACTTAGTTTTTAGAGTCAGTGAAGGGCTTATCACGAGATGGCC  350

seq1  TGTCAATTTTTCTCTTATGAGTCAATTCTCAGAGCTGAGCCTGCCACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAATTTTTCTCTTATGAGTCAATTCTCAGAGCTGAGCCTGCCACTCA  400

seq1  TTTTTAATCCAGTGACCCATGTCCATGTTCAATCAATAAAAGATTTTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCCAGTGACCCATGTCCATGTTCAATCAATAAAAGATTTTGTG  450

seq1  ACTACTTACGTTAAACACTACCTTAAGAACAATGAAGAACCAATTGCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTTACGTTAAACACTACCTTAAGAACAATGAAGAACCAATTGCCAG  500

seq1  ATCTTAAAACTAGATTTAAAACTTTGAATTTGAATTGGGAGAACTGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTAAAACTAGATTTAAAACTTTGAATTTGAATTGGGAGAACTGAGCA  550

seq1  GACACGTGTCAATGTCCCTCCAATGTCTTCTTCTGCCTAAATCTCAGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACGTGTCAATGTCCCTCCAATGTCTTCTTCTGCCTAAATCTCAGTCC  600

seq1  TTACCTGCTAACTGGGGAGGTGCAGGGTACTATGTGTAGCTTCCTACAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGCTAACTGGGGAGGTGCAGGGTACTATGTGTAGCTTCCTACAGA  650

seq1  TGCTTTGAATACAGGGCAGGATCCACTCAGGCAAGGATGGTTTTACACGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAATACAGGGCAGGATCCACTCAGGCAAGGATGGTTTTACACGG  700

seq1  GTTCCTCAGGGCAAGGACAGTTTCTTTCTTGTGTGCTAAGGCCTTATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCAGGGCAAGGACAGTTTCTTTCTTGTGTGCTAAGGCCTTATGCT  750

seq1  AAAATAATCATAGTTTATTAACTACAAAATAGCACTATGGAGCTAGAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAATCATAGTTTATTAACTACAAAATAGCACTATGGAGCTAGAACA  800

seq1  TCCACTTTCCACCTGCTGACAGGGGGAAGCAAGTAGGTCAAGGGGCAGGA  850
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TCCACTTTCCACCTGCTGACA-GGGGAAGCAAGTAGGTCAAGGGGCA-GA  848

seq1  CCAGCAAACTTTCAGTACACACTTGTCATTGAAGGTTCTGAGGGGGCTCT  900
      ||||||||||||||||||||| ||||||||||| ||||||| ||||||||
seq2  CCAGCAAACTTTCAGTACACATTTGTCATTGAAAGTTCTGA-GGGGCTCT  897

seq1  GGTCCTGCTGGAAACGGCCAAAGTGTTACAGCTC-TCAGAAGGGAAGCTT  949
      ||||||||| |||||||||||||||||||||||| |||||| ||||||||
seq2  GGTCCTGCTTGAAACGGCCAAAGTGTTACAGCTCTTCAGAA-GGAAGCTT  946

seq1  GCAGGGCAGGTAGCTGGGGTCCCAGGTCTCATCTGCTACTGAGGCAGTGC  999
      ||| |||||||||||||||| ||| ||||||||||||||||| |||||||
seq2  GCA-GGCAGGTAGCTGGGGTTCCA-GTCTCATCTGCTACTGAAGCAGTGC  994

seq1  CAATGCCAGCAGCAGGGGCGGTGGCAGCAGAGGGCAGCAGCAGGTGACCA  1049
      | ||||||||| || ||||||||  | |  | |||| || ||||||||||
seq2  C-ATGCCAGCATCAAGGGCGGTGCAACC--AAGGCATCACCAGGTGACCA  1041

seq1  GGGGCAGTGATGGCACAGGGTGAGAGTGGAAGTGGTGGCAGGGGCATGAG  1099
        |||| |||| ||||| |||||||   ||| || ||  ||    ||  |
seq2  -TGGCA-TGAT-GCACA-GGTGAGA--TGAAATGCTGCAAG----ATATG  1081

seq1  CTCATACTGCCAGGTGGGTCCAAAGTCCATTGATTAATCTTTTGGGAGAG  1149
      ||||  ||||||   | |||  |||||   ||||  ||||||| ||||| 
seq2  CTCAATCTGCCA---GTGTC--AAGTC--ATGAT--ATCTTTT-GGAGA-  1120

seq1  AGAAATCTCCCT  1161
      ||||||||||||
seq2  AGAAATCTCCCT  1132

seq1: chr6_137562416_137563304
seq2: B6Ng01-007P07.g_68_961 (reverse)

seq1  GAGAG-----AGAGAGAGAAACCGTCATCAAACAAAATGCATCAGT-ATT  44
      |||||     | ||||||||||||||||||| |||||||||||||| || 
seq2  GAGAGAAAAAAAAGAGAGAAACCGTCATCAACCAAAATGCATCAGTAATA  50

seq1  AGTGTTTTCCATTTTCAGTGTTAAGTCAGAGTTCCAAGATGGCTAAGCTC  94
      |||||||  || ||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTT--CAATTTCAGTGTTAAGTCAGAGTTCCAAGATGGCTAAGCTC  98

seq1  TATAAGTACTAAGGGATGTTGCCCTCTTCTGGCACC-TTAGGCCCTTGGG  143
      |||||||||||| ||||| ||||||||||||||||| ||||||| |||||
seq2  TATAAGTACTAA-GGATGATGCCCTCTTCTGGCACCTTTAGGCCTTTGGG  147

seq1  GATGCAGCTCCATTCCATCACCACTGGCTGGCTCTCAAAACAGTCCATCA  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGCTCCATTCCATCACCACTGGCTGGCTCTCAAAACAGTCCATCA  197

seq1  GCCTGTGGAGGTCAGCTCAGCCTGAT-CCCAGTGGCTAGCTGCCAGGCGA  242
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCCTGTGGAGGTCAGCTCAGCCTGATCCCCAGTGGCTAGCTGCCAGGCGA  247

seq1  AAGAAACCCTGTAGCAAATTGCAGCTTACAGGGGCGTGTGTGAGAGGGAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCCTGTAGCAAATTGCAGCTTACAGGGGCGTGTGTGAGAGGGAG  297

seq1  GCCCTCACAGGGGACCCTCTGGGACTTTCAGTCAATGCATTGTTTTCTAG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCACAGGGGACCCTCTGGGACTTTCAGTCAATGCATTGTTTTCTAG  347

seq1  TTTTTAGGAATTCAGGCATTCCTTGTTGACATTTAAGACTTGTCATGTCG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGGAATTCAGGCATTCCTTGTTGACATTTAAGACTTGTCATGTCG  397

seq1  AAGGCACCTGAACAGCTGTGGTAGCTTCTCTTAAATTCTCTGCTCCAAAA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACCTGAACAGCTGTGGTAGCTTCTCTTAAATTCTCTGCTCCAAAA  447

seq1  GTGCTTAAACCAGTCTCTCCTGCGTACCCAACGCCACAGTTCATTCCCAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTAAACCAGTCTCTCCTGCGTACCCAACGCCACAGTTCATTCCCAA  497

seq1  TGTCACAGCCTTGGGCTCCGTCCTTTCCTTTCCTTCATTGCTGAGCAGCA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGCCTTGGGCTCCGTCCTTTCCTTTCCTTCATTGCTGAGCAGCA  547

seq1  GTCAGGTCTTCTCCCATGATCCCCCAGCCTGTCGCTCCATTTCTCAGATG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGTCTTCTCCCATGATCCCCCAGCCTGTCGCTCCATTTCTCAGATG  597

seq1  CAGCCACCCCCCACAGATCCAAACGACATTGAAAAGTACATTGTTGCAAA  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACCCCCCACAGATCCAAACGACATTGAAAAGTACATTGTTGCAAA  647

seq1  CAACATCCTGACTAATGTTTCTGGTCCTTATTCCTCCGCCAAGGCAGCCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCCTGACTAATGTTTCTGGTCCTTATTCCTCCGCCAAGGCAGCCT  697

seq1  ATCAGCTGCTTACACAACATTGACACTGTGAGGTAGGATAAGTAATTGGA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGCTTACACAACATTGACACTGTGAGGTAGGATAAGTAATTGGA  747

seq1  GATGACCTAGAGGATACTAAGGTGTATGTGCCGGCTACAAGAAAACCTCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACCTAGAGGATACTAAGGTGTATGTGCCGGCTACAAGAAAACCTCA  797

seq1  CAGCGTTTTAGAGAACACACTTGACCTTCACGGACTTCAGTGACTTCGAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCGTTTTAGAGAACACACTTGACCTTCACGGACTTCAGTGACTTCGAG  847

seq1  GGAAATGCAAACTGAAGTAGTCTCTGCGGACACTGAAAGATGAATTC  889
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGCAAACTGAAGTAGTCTCTGCGGACACTGAAAGATGAATTC  894