BAC Information

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BAC

Clone NameB6Ng01-008E02
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008E02.bB6Ng01-008E02.g
ACCDH844570DH844571
length433797
definitionDH844570|Mus musculus domesticus DNA, BAC clone: B6Ng01-008E02, 5' end.DH844571|Mus musculus domesticus DNA, BAC clone: B6Ng01-008E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagccccatcctttaatggggctatatgattttctgg
agtccaccttcttgagttctttatatatattggatattagtcccctatct
gatttaggataggtaaagatcctttcccaatctgttggtggtctttttgt
cttatcgatggtgtctttttccttgcagaagctttgcaattttatgaggt
cccatttgtcaattcttgatcttacagcacaagccattgctgttctattc
aggaattttccccctgtacccatatcttcaaggcttttccctactttctc
ctgaataagtttcagtgtctctggttttatgtggagttccttattcactt
gttctaagatttgatcttagaacaaggagataggaatggatcaattcgta
ttgttctacatgtttatgcgccagttgtgcaat

gaattctttgttcagttctgagccccattttttaattgggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
tatctgatttaggataggtaatgatcctttcccaatctgttggtggtctt
tttgtcttattgatggtgtcttttgccttgcagaagctttggagtttcat
gaggtcccatttgtcaattctcaatcttacagcaaggccattgctgttct
actcacgaatttttcccctgtgcccatatcttcgaggcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtggagttccttgatc
cacttagacttgaccttagtacaagtggataagaatggatcaatttgcat
tctccaacatgataactgccagttgtgccagcaccatttgttgaaaatgc
tgtcttttttccactggatggtttttgctcccttttcaaagatcaagtga
ccataggtgtgtgggctcatttctgggtcttcaatgctattccattggtc
tacctgtctgttgccctaccagtaccatgcattttttttcacaattgctc
tgtatacagctttaggtcaggcatggtgattccaccaaatttcttttatc
cttgagaagagtttttgctatcctaggttttttgttattccagatgaatt
tacaaattgcccttttttatttcattgactatcatttgggattaaaagta
tgtgcaagtgctgagccatgccacaattagatttagttttttttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-008E02.g_68_594 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||| ||||||||||||||||||||||||||| || |||||||
seq2  CCCAGAAATGAGCCCACACACCTATGGTCACTTGATCTTTGAAAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      | ||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  CAAAAACCATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      |||||||||  |||||| ||| | ||||||  ||| ||||||| ||||||
seq2  CACAACTGGCAGTTATCATGTTGGAGAATGCAAATTGATCCATTCTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
        | |||||||||||||| |||||||||||||||||||| ||||||||||
seq2  CACTTGTACTAAGGTCAAGTCTAAGTGGATCAAGGAACTCCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGCTGTGCTGTG  300
      ||||||| ||||||||| ||| |||  ||||||||||||||  |||||| 
seq2  ATGGGCACAGGGGAAAAATTCGTGAGTAGAACAGCAATGGCCTTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350
      || | |||||| |||||||||||||| |||||||||||||| ||||||||
seq2  AGATTGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCATCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGATCATTACCTATCCTAAATCAGATA-GGGACTAATATCCAACATATAT  449

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  500
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCAATTAAAAA  499

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  528
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  527


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