BAC Information

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BAC

Clone NameB6Ng01-011C19
Chromosome6 (Build37)
Map Location 119,346,684 - 119,347,721
singlet/doubletsinglet
Overlap geneAdipor2
Upstream geneBms1, Zfp248, Zfp9, Ankrd26, Cacna1c, Dcp1b, Cacna2d4, Lrtm2
Downstream geneWnt5b, Fbxl14, Erc1, LOC666887, Rad52, Wnk1, EG406236, Ninj2, B4galnt3, Ccdc77, Jarid1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011C19.bB6Ng01-011C19.g
ACCDH846628DH846629
length1,077345
definitionDH846628|Mus musculus domesticus DNA, BAC clone: B6Ng01-011C19, 5' end.DH846629|Mus musculus domesticus DNA, BAC clone: B6Ng01-011C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggcaagctagggctacactgagagagcctatctcaaaaataa
ctatctaattaataaacaatcccaataccccatctattttctttatttga
gtggggagaagaaagaagaaaccacatcccagggatggagagatggcgca
gtggttaagagcatgcactgttcttccagaggacctgagtccagttccca
gcacccacaggtcaggcagttcatactcatctgtaactccagctccagga
ggtctgatgcctctggcttccaagggcacccagtgctagagtatacatcg
tccctgaaaaagagcagctcttgaaaggtttttggtgtggccgccagtgg
caactgtgctacagaaccatcgcccactcttttcttctcttacattacta
ctggaccaatttgtttgtaaaaaggtaaaaattgccaggtgtggtggcgc
acgcctttcatcccagcactcgggaggcagaggcaggcggatttctgagt
gcaaggccagcctggtctacagagtgagatccgggacagccagggctaca
cagagaaaccctgtctcgaaaaacaaaaaccaaaaaccaaccaaccaaac
aaacaaaaaaaccccaaaaaggtaaaaatttcttgaacagacatattcca
agtactgagactgtaataatagaagaacatctttgtttttgagtctagtg
gcccttgccagacttccaggagagtccatggatttggttaagatcatagt
gtgtcaagtttgagctgagattataagccggtaccacatggatttggtta
agatcatagtgtgtcaagtttgagctgagattataagccggtaccacctt
tggctcttttgctagctatgtgattttggggaaatgacttgtttgtgctt
cagtttccttatttgtaaaatgggggatttaaaaaaaaaacataatttaa
gaaggcattgtggcataaaccttgtaatcttaacaacttgagaggcggag
acaggaggattactatgatttggagcttgagcctgggttctaatggtgag
tgctggccagtcaagatacgggatggt
aaattatctctgtatgcagacagcgtaattgcatacttaatagacactat
agatgccaccagaagattcctcgatctaataaacactttcattaaagttc
cagggtgcaaattcaacatacaaaaatcggtagctttcttaaatgccagc
aacaaacttggtgagaaagaagttaaggaaaaaacatccctgaaagtggg
gaggtctggtgagatgggggtgtgcgtggggacatcttcttggcgactgg
ggtaagaggtgtgggatgtggctcagttggggcgtggactgggagagata
ataagtctctaattactttattttatatttggaattaattagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_119346684_119347721
seq2: B6Ng01-011C19.b_80_1121 (reverse)

seq1  ACCATCCCGTTATCTTGACTGGGCCAGCACTCA-CATTAGAACCCAGGCT  49
      ||||||||| |||||||||| |||||||||||| ||||||||||||||||
seq2  ACCATCCCG-TATCTTGACT-GGCCAGCACTCACCATTAGAACCCAGGCT  48

seq1  C-AGCTCAAATTCATAGTAATCCTCCTGTCTCCGCTTCTCAAG-TGTTAA  97
      | ||||| || |||||||||||||||||||||||| ||||||| ||||||
seq2  CAAGCTCCAAATCATAGTAATCCTCCTGTCTCCGCCTCTCAAGTTGTTAA  98

seq1  GATTAC-AGGTTTATGCCACAATGCC-TCTTAAATTATGTTTTTTTTTTA  145
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  GATTACAAGGTTTATGCCACAATGCCTTCTTAAATTATGTTTTTTTTTTA  148

seq1  AAT-CCCCATTTTACAAATAAGGAAACTGAAGCACAAACAAGTCATTTCC  194
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCCCCATTTTACAAATAAGGAAACTGAAGCACAAACAAGTCATTTCC  198

seq1  CCAAAATCACATAGCTAGCAAAAGAGCCAAAGGTGGTACCGGCTTATAAT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATCACATAGCTAGCAAAAGAGCCAAAGGTGGTACCGGCTTATAAT  248

seq1  CTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCCATGTGGTACC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCCATGTGGTACC  298

seq1  GGCTTATAATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATAATCTCAGCTCAAACTTGACACACTATGATCTTAACCAAATCC  348

seq1  ATGGACTCTCCTGGAAGTCTGGCAAGGGCCACTAGACTCAAAAACAAAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTCTCCTGGAAGTCTGGCAAGGGCCACTAGACTCAAAAACAAAGA  398

seq1  TGTTCTTCTATTATTACAGTCTCAGTACTTGGAATATGTCTGTTCAAGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTCTATTATTACAGTCTCAGTACTTGGAATATGTCTGTTCAAGAA  448

seq1  ATTTTTACCTTTTTGGGGTTTTTTTGTTTGTTTGGTTGGTTGGTTTTTGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTACCTTTTTGGGGTTTTTTTGTTTGTTTGGTTGGTTGGTTTTTGG  498

seq1  TTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCGGA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTTTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCCGGA  548

seq1  TCTCACTCTGTAGACCAGGCTGGCCTTGCACTCAGAAATCCGCCTGCCTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCACTCTGTAGACCAGGCTGGCCTTGCACTCAGAAATCCGCCTGCCTC  598

seq1  TGCCTCCCGAGTGCTGGGATGAAAGGCGTGCGCCACCACACCTGGCAATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCGAGTGCTGGGATGAAAGGCGTGCGCCACCACACCTGGCAATT  648

seq1  TTTACCTTTTTACAAACAAATTGGTCCAGTAGTAATGTAAGAGAAGAAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTTTTTACAAACAAATTGGTCCAGTAGTAATGTAAGAGAAGAAAA  698

seq1  GAGTGGGCGATGGTTCTGTAGCACAGTTGCCACTGGCGGCCACACCAAAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGGCGATGGTTCTGTAGCACAGTTGCCACTGGCGGCCACACCAAAA  748

seq1  ACCTTTCAAGAGCTGCTCTTTTTCAGGGACGATGTATACTCTAGCACTGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAAGAGCTGCTCTTTTTCAGGGACGATGTATACTCTAGCACTGG  798

seq1  GTGCCCTTGGAAGCCAGAGGCATCAGACCTCCTGGAGCTGGAGTTACAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCCTTGGAAGCCAGAGGCATCAGACCTCCTGGAGCTGGAGTTACAGA  848

seq1  TGAGTATGAACTGCCTGACCTGTGGGTGCTGGGAACTGGACTCAGGTCCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTATGAACTGCCTGACCTGTGGGTGCTGGGAACTGGACTCAGGTCCT  898

seq1  CTGGAAGAACAGTGCATGCTCTTAACCACTGCGCCATCTCTCCATCCCTG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAACAGTGCATGCTCTTAACCACTGCGCCATCTCTCCATCCCTG  948

seq1  GGATGTGGTTTCTTCTTTCTTCTCCCCACTCAAATAAAGAAAATAGATGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGTGGTTTCTTCTTTCTTCTCCCCACTCAAATAAAGAAAATAGATGG  998

seq1  GGTATTGGGATTGTTTATTAATTAGATAGTTATTTTTGAGATAG  1038
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGGGATTGTTTATTAATTAGATAGTTATTTTTGAGATAG  1042