BAC Information

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BAC

Clone NameB6Ng01-011I17
Chromosome6 (Build37)
Map Location 79,307,330 - 79,307,852
singlet/doubletsinglet
Overlap genenone
Upstream genePap, Reg3d, Reg3a, Reg2, Reg1, Reg3g, LOC621716, Ppia-ps6_789.1, LOC384440
Downstream geneLOC621815, LOC100043392, Lrrtm4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-011I17.bB6Ng01-011I17.g
ACCDH846899DH846900
length1,230517
definitionDH846899|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I17, 5' end.DH846900|Mus musculus domesticus DNA, BAC clone: B6Ng01-011I17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaacaaatcagtggcctttctctacacaaaggataaacaggctg
agaaagaaattagggaaacaacacccttcacaatagtcacaaataatata
aaatatcttggtgtgactctaactaagcaagtgaaagatttgtatgataa
gaacttcaagtctctgaagaaaaattgaagaagatctcagaagatggaaa
ggtctcccatcctcagggattggcaggattaatatagtaaaattggccat
cttgccaaaagctatctacctattaaatgcaatccacatcaaaattttaa
ctcaactcttcatagatttagaaagagcaattttcatattcatctgtaat
aacaaagaaatccaggatagggaaacctgttctcaaaaatagaagaacct
ctgggtgaatcaccacccctgagatcaagctgcactacagagcacttgtg
ataaagattgcatggtattggtacagtgacaggcagatagatcattggaa
tagaattgagtacccagtaaagaatccacacacctttggtcacttgatct
ttgacaaaggagctaaaaccatctagtggaaagaagacagcatcttcaac
aaatagtgctggctcaactggcagttaccatgtagaagaagccaaattga
cccattcttatctccttgtaccaagctcaagtccaagtggatcaaggacc
ttcacatataaccagatacactgaaatttattgaagagaaagtggggaag
agccttgaacgtatgggcagagggggaaaaaattcctgaacagaacacca
gtggcttgtgctgtaagatcaagaatcaacacatgggctctcataaaatt
gcaaagcttttgtaaggcaaaggacattgtcaagaagacaaaaggccacc
aacagattgggaatagatcttcaccaatcctacatagaggataatcctga
tagagggctaatatccatatatacaaagaactcaggagttcgactcccag
aaacaaataccctattaaaatggggtacagagctaaagaaattttcactg
gagaatgatgggctctggagcactaaatgttccatgttttagttatcagt
gaatatgcaatatagtcattcagcaattccatcaaaccatcctgaatcac
ctcccagttcgatggcctaagtccgatatgttacagcagtctgtggagaa
ttggaaagaagaaaacttctcattatactg
aggaaataaacctggaatcaggaactggattagcggtctagagcagtagt
tctcaattaaaggggtcatgaccactttgagaaacctctatccctaagaa
tatttacattaggatccataacattagcaaaattatagctatgaattaac
aatgaagaattttgcggtaggaggccactacaatataaggaaattattaa
gcattttattgtatattaagctttgccctgcctaaagtgtggtacatata
ttcaaggagaagaagcaaggtcagtgaacttgcattaatcacatgccatg
gcaagactgttttaggaaataaaagaatggtcttagaaagacacaaatat
gacataaccagtacccccccagaacaatatatctagttgcatatgtagca
gaggattgcctagtcagccatcaatgggaggagaggcccttggtcttgca
aagattatatgccccagtacaggggaatgccagggccaggaagttgggag
tgggtgggttggggaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_79307330_79307852
seq2: B6Ng01-011I17.g_67_589

seq1  GAATTCAGGAAATAAACCTGGAATCAGGAACTGGATTAGCGGTCTAGAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAAATAAACCTGGAATCAGGAACTGGATTAGCGGTCTAGAGC  50

seq1  AGTAGTTCTCAATTAAAGGGGTCATGACCACTTTGAGAAACCTCTATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTCTCAATTAAAGGGGTCATGACCACTTTGAGAAACCTCTATCCC  100

seq1  TAAGAATATTTACATTAGGATCCATAACATTAGCAAAATTATAGCTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATATTTACATTAGGATCCATAACATTAGCAAAATTATAGCTATGA  150

seq1  ATTAACAATGAAGAATTTTGCGGTAGGAGGCCACTACAATATAAGGAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACAATGAAGAATTTTGCGGTAGGAGGCCACTACAATATAAGGAAAT  200

seq1  TATTAAGCATTTTATTGTATATTAAGCTTTGCCCTGCCTAAAGTGTGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGCATTTTATTGTATATTAAGCTTTGCCCTGCCTAAAGTGTGGTA  250

seq1  CATATATTCAAGGAGAAGAAGCAAGGTCAGTGAACTTGCATTAATCACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTCAAGGAGAAGAAGCAAGGTCAGTGAACTTGCATTAATCACAT  300

seq1  GCCATGGCAAGACTGTTTTAGGAAATAAAAGAATGGTCTTAGAAAGACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGGCAAGACTGTTTTAGGAAATAAAAGAATGGTCTTAGAAAGACAC  350

seq1  AAATATGACATAACCAGTACCCCCCCAGAACAATATATCTAGTTGCATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGACATAACCAGTACCCCCCCAGAACAATATATCTAGTTGCATAT  400

seq1  GTAGCAGAGGATTGCCTAGTCAGCCATCAATGGGAGGAGAGGCCCTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCAGAGGATTGCCTAGTCAGCCATCAATGGGAGGAGAGGCCCTTGGT  450

seq1  CTTGCAAAGATTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAAAGATTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGT  500

seq1  TGGGAGTGGGTGGGTTGGGGAAC  523
      |||||||||||||||||||||||
seq2  TGGGAGTGGGTGGGTTGGGGAAC  523