BAC Information

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BAC

Clone NameB6Ng01-012L02
Chromosome6 (Build37)
Map Location 69,565,341 - 69,566,065
singlet/doubletsinglet
Overlap geneIgk
Upstream geneIgkv10-96, Igkv2-95-2, Igkv2-95-1, EG434031, EG667550, Igkv2-93-1, Igkv19-93, Gm1408, ENSMUSG00000056850, Igkv4-90, Igkv13-89-1, Igkv12-89, Igkv1-88, Igkv13-87, Gm459, Igkv13-85, Igkv13-84, Igkv4-83, Igkv13-82, Gm460, Igkv13-80-1, Igkv4-80, Gm194, EG628498, Igkv4-78, EG667621, Igkv13-76, Igkv4-75, Igkv13-74-1, LOC236047, Igkv13-73-1, EG628516, Gm1499, Igkv13-71-1, Igkv4-71, Gm1502, EG628541, Gm1419, Igkv12-67, Igkv12-66, Igkv4-65, Igkv13-64, EG628571, Igkv13-62-1, EG636752, Igkv13-61-1, Igkv4-61, EG667683, Igkv4-60, Gm1077, Igkv13-57-2, Gm1418, Igkv13-57-1, Gm189, Igkv13-56-1, Igkv4-56, Igkv13-55-1, Gm1524
Downstream geneIgkv13-54-1, Igkv4-54, Gm1420, Igkv4-51, Gm1069, Igkv12-49, Igkv5-48, ENSMUSG00000029975, Igkv12-46, Igkv5-45, Igkv12-44, Igkv5-43, Igkv12-42, Igkv12-41, Igkv5-40-1, Igkv12-40, Gm1409, Igkv12-38, Gm1410, Igkv18-36, Igkv1-35, Igkv8-34, U29423, ENSMUSG00000053690, Igkv8-31, Igkv8-30, LOC545852, Igkv6-29, Igkv8-28, Igkv8-27, Igkv8-26, LOC667812, Igkv6-25, Igkv8-24, Igkv8-23-1, Igkv6-23, LOC667829, Igkv8-22, Igk-V8-21, EG667840, Igk-V19-20, Igk-V8-19, Igk-V8-18, LOC667863, Igk-V19-17, Igk-V8-16, Igk-V19-15, LOC667872, LOC620497, Igk-V19-14, LOC667889, Igk-V19-13, LOC667902, Igkv3-12-1, Igk-V21-12, Igk-V21-11, Igk-V21-10, Igk-V21-9, Igk-V21-8, Igk-V21-7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-012L02.bB6Ng01-012L02.g
ACCDH847714DH847715
length7251,223
definitionDH847714|Mus musculus domesticus DNA, BAC clone: B6Ng01-012L02, 5' end.DH847715|Mus musculus domesticus DNA, BAC clone: B6Ng01-012L02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactctggatcaattgtctccaaatagaatggggagtaaggtcct
ttttcctataaattccctcagctttcctctgttctgtatcatgttcttta
gggttcaatttatagaaatcagagatttaggaaggacttacttagtagac
aattcttaaaaccctatctccttggctgaggagaaatattttcagtttat
gatattgctgtgcatcataaccactacacacattgaaattggatgcagca
atccgacagaacagaagagttggagaaatatttatttgcatactttggga
atctcataaataaatgaaagtggatgccattatatacatgcagaggacat
ggtagacacctgtgaagggcctgtgcatgttccttcatttctgtgggctc
atgtgatctttgttcatgttgattaagagggctttgtttcttggtgtttc
catatttctgcctcttctttctgtctcctctgggttcttggagctccaag
aagagggatttcattctgacttcccacttagtacagaatgtttacagccc
cagctgtgctaagttcttgggactacaaattctgggaccctgcttctttc
tctctctctctctctctctctgtctctctctgtctctctctctctctctc
tgtatatatatatatatatatatatatatatatatatatatatatataca
tacatatacacatagacatatatat
gaattctcagctgaggaaattcaaagggcttaataacacctaaataaatg
ttcaacatccttagttatcaagggactgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatgaaaaactcaggtgacatc
agatgctgagaaggatgtggaaaaagaggaacattcctctattgtttgtg
caattgaaagcttgtacaaccactctggaaatcagtctggcaattcctct
gaaaattggacatagtattactcgaggatgcacctatactactctcgggc
atacagccaaaagatgctccaatatatagcaagaacacatgctccactgt
tcatatcagccatatttgtaataactggaaactgaaaagaacccaaatgt
tattcaacataggaatggatagagaaaatgtggtatatttacacaatgga
gtactacttaggtattaaaaacaatgacttcatgaaattcttaggcaaat
ggatggaactagaaaatatcatactgagtgagataaccctatcacaaaag
aacacacatggtatgtattcactgaaatgtgcatattagtcaaaaaactc
agaataaccgaaatacaagtcatagactacatgaatgtcaagaagaagga
agacaaaagtgtgggtgcttcaatacttcttaaaaggggaacaaaacaca
ggagcaaatacagagacagtgtggagcaaagactgaaggaaaagccatcc
agggaatggctccaatggaggagttagagaaaggactaaaggaggatcac
aataaggaagcaaatatacagacaaagtgtacagcagagatggaaggaaa
ggtcatccagaaactgcccccctggggatctatcccatatagagacacca
aaccccacactattatggatcccaggacatgtatgctgacaggagtctga
tacactgtcacttgatagttctgccttgacaatccaaagcaaatgctcca
gtccacctttggactgaacaatgccttccaaatggaaaagctgaggacag
cactgaatgtcattcgaagggtttgtttactcccatagcaagaattcttt
caacgagcgaagttcctatggctctaatccttcaccaacgagtcacctgt
aaaatttgcaagagtagcctacacctcaattgtataattgtcctccatcg
tacagaaataactcttattgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_69565341_69566065
seq2: B6Ng01-012L02.b_43_767 (reverse)

seq1  ATATATATGTATATGTGTATATGTATGTATATATATATATATATATATAT  50
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTCTATGTGTATATGTATGTATATATATATATATATATATAT  50

seq1  ATATATATATATATATATATATACAGAGAGAGAGAGAGAGAGACAGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATACAGAGAGAGAGAGAGAGAGACAGAGAG  100

seq1  AGACAGAGAGAGAGAGAGAGAGAGAGAAAGAAGCAGGGTCCCAGAATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGAGAGAGAGAGAGAGAGAGAAAGAAGCAGGGTCCCAGAATTTG  150

seq1  TAGTCCCAAGAACTTAGCACAGCTGGGGCTGTAAACATTCTGTACTAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCCAAGAACTTAGCACAGCTGGGGCTGTAAACATTCTGTACTAAGT  200

seq1  GGGAAGTCAGAATGAAATCCCTCTTCTTGGAGCTCCAAGAACCCAGAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGTCAGAATGAAATCCCTCTTCTTGGAGCTCCAAGAACCCAGAGGA  250

seq1  GACAGAAAGAAGAGGCAGAAATATGGAAACACCAAGAAACAAAGCCCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAGAAGAGGCAGAAATATGGAAACACCAAGAAACAAAGCCCTCT  300

seq1  TAATCAACATGAACAAAGATCACATGAGCCCACAGAAATGAAGGAACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAACATGAACAAAGATCACATGAGCCCACAGAAATGAAGGAACATG  350

seq1  CACAGGCCCTTCACAGGTGTCTACCATGTCCTCTGCATGTATATAATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCCCTTCACAGGTGTCTACCATGTCCTCTGCATGTATATAATGGC  400

seq1  ATCCACTTTCATTTATTTATGAGATTCCCAAAGTATGCAAATAAATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACTTTCATTTATTTATGAGATTCCCAAAGTATGCAAATAAATATTT  450

seq1  CTCCAACTCTTCTGTTCTGTCGGATTGCTGCATCCAATTTCAATGTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACTCTTCTGTTCTGTCGGATTGCTGCATCCAATTTCAATGTGTGT  500

seq1  AGTGGTTATGATGCACAGCAATATCATAAACTGAAAATATTTCTCCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTATGATGCACAGCAATATCATAAACTGAAAATATTTCTCCTCAG  550

seq1  CCAAGGAGATAGGGTTTTAAGAATTGTCTACTAAGTAAGTCCTTCCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGAGATAGGGTTTTAAGAATTGTCTACTAAGTAAGTCCTTCCTAAA  600

seq1  TCTCTGATTTCTATAAATTGAACCCTAAAGAACATGATACAGAACAGAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGATTTCTATAAATTGAACCCTAAAGAACATGATACAGAACAGAGG  650

seq1  AAAGCTGAGGGAATTTATAGGAAAAAGGACCTTACTCCCCATTCTATTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTGAGGGAATTTATAGGAAAAAGGACCTTACTCCCCATTCTATTTG  700

seq1  GAGACAATTGATCCAGAGTGAATTC  725
      |||||||||||||||||||||||||
seq2  GAGACAATTGATCCAGAGTGAATTC  725