MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-012M20
Chromosome	6 (Build37)
Map Location	58,809,256 - 58,810,219
singlet/doublet	singlet
Overlap gene	Herc3
Upstream gene	LOC626582, V1rc23, V1rc24, LOC100041514, V1rc18, V1rc8, V1rc17, EG633683, LOC626649, LOC626659, LOC626672, LOC666893, LOC100041571, V1rc33, LOC626724, V1rc25, V1rc2, LOC666928, V1rc22, LOC626817, EG626828, LOC666954, Abcg2
Downstream gene	Nap1l5, D430015B01Rik, Tigd2, Gprin3, EG634166
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC626582 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 Proteins

name	V1rc23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171196 MGI:2159459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc24 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171197 MGI:2159460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041514 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041514
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	V1rc18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171191 MGI:2159454
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113865 MGI:2148529
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171190 MGI:2159453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG633683 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:633683 MGI:3647234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 910 ESTs, 7 Proteins

name	LOC626649 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626649
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 40 Proteins pseudo : _no_value

name	LOC626659 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626659
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 31 Proteins pseudo : _no_value

name	LOC626672 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626672
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 17 Proteins pseudo : _no_value

name	LOC666893 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666893
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100041571 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041571
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	V1rc33 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171206 MGI:2159470
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626724 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626724
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	V1rc25 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171198 MGI:2159461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	V1rc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:113859 MGI:2148523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC666928 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 55 Proteins pseudo : _no_value

name	V1rc22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171195 MGI:2159458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC626817 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:626817
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	EG626828 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:626828 MGI:3649162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 Proteins

name	LOC666954 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:666954
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins pseudo : _no_value

name	Abcg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26357 MGI:1347061
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Herc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73998 MGI:1921248
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nap1l5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58243 MGI:1923555
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D430015B01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58909 MGI:1889842
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tigd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68140 MGI:1915390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gprin3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243385 MGI:1924785
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG634166 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:634166 MGI:3644207
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	LOC626582 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149255147 GeneID:626582
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 56 Proteins product : similar to vomeronasal receptor V1RC18 transcript_id : XM_001476469.1

name	V1rc23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717676 GeneID:171196 MGI:2159459
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C23 transcript_id : NM_134178.1

name	V1rc24 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717686 GeneID:171197 MGI:2159460
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C24 transcript_id : NM_134179.1

name	V1rc18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717674 GeneID:171191 MGI:2159454
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C18 transcript_id : NM_134173.1

name	V1rc8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110611164 GeneID:113865 MGI:2148529
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C8 transcript_id : NM_053238.2

name	V1rc17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717664 GeneID:171190 MGI:2159453
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C17 transcript_id : NM_134172.1

name	EG633683 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94377389 GeneID:633683 MGI:3647234
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 909 ESTs, 7 Proteins product : predicted gene, EG633683 transcript_id : XM_986705.1

name	V1rc33 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717792 GeneID:171206 MGI:2159470
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C33 transcript_id : NM_134436.1

name	V1rc25 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717680 GeneID:171198 MGI:2159461
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C25 transcript_id : NM_134180.1

name	V1rc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:16716546 GeneID:113859 MGI:2148523
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C2 transcript_id : NM_053232.1

name	V1rc22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21717682 GeneID:171195 MGI:2159458
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : vomeronasal 1 receptor, C22 transcript_id : NM_134177.1

name	EG626828 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255150 GeneID:626828 MGI:3649162
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 65 Proteins product : predicted gene, EG626828 transcript_id : XM_891437.2

name	Abcg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110815847 GeneID:26357 MGI:1347061
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family G (WHITE), member 2 transcript_id : NM_011920.3

name	Herc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27777641 GeneID:73998 MGI:1921248
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hect domain and RLD 3 transcript_id : NM_028705.2

name	Nap1l5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946797 GeneID:58243 MGI:1923555
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleosome assembly protein 1-like 5 transcript_id : NM_021432.1

name	D430015B01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887799 GeneID:58909 MGI:1889842
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D430015B01 gene transcript_id : NM_153574.2

name	Tigd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487250 GeneID:68140 MGI:1915390
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tigger transposable element derived 2 transcript_id : NM_001081145.1

name	Gprin3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351364 GeneID:243385 MGI:1924785
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : GPRIN family member 3 transcript_id : NM_183183.2

name	LOC626582 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149255148 GeneID:626582
definition	codon_start : 1 product : similar to vomeronasal receptor V1RC18 protein_id : XP_001476519.1

name	V1rc23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717677 CCDS:CCDS20187.1 GeneID:171196 MGI:2159459
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C23 protein_id : NP_598939.1

name	V1rc24 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717687 GeneID:171197 MGI:2159460
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C24 protein_id : NP_598940.1

name	V1rc18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717675 CCDS:CCDS20188.1 GeneID:171191 MGI:2159454
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C18 protein_id : NP_598934.1

name	V1rc8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110611165 CCDS:CCDS20189.1 GeneID:113865 MGI:2148529
definition	GO_function : GO:0004872 - receptor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0007606 - sensory perception of chemical stimulus [Evidence TAS] codon_start : 1 product : vomeronasal 1 receptor, C8 protein_id : NP_444468.2

name	V1rc17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717665 CCDS:CCDS20190.1 GeneID:171190 MGI:2159453
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C17 protein_id : NP_598933.1

name	EG633683 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94377390 GeneID:633683 MGI:3647234
definition	codon_start : 1 product : similar to insulinoma protein (rig) protein_id : XP_991799.1

name	V1rc33 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717793 CCDS:CCDS20192.1 GeneID:171206 MGI:2159470
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 exception : mismatches in translation product : vomeronasal 1 receptor, C33 protein_id : NP_602318.1

name	V1rc25 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717681 CCDS:CCDS20193.1 GeneID:171198 MGI:2159461
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence IEA] [Evidence ISS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS] codon_start : 1 product : vomeronasal 1 receptor, C25 protein_id : NP_598941.1

name	V1rc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:16716547 CCDS:CCDS20194.1 GeneID:113859 MGI:2148523
definition	GO_function : GO:0004872 - receptor activity [Evidence ISS] [Evidence IEA] GO_process : GO:0007606 - sensory perception of chemical stimulus [Evidence TAS] codon_start : 1 product : vomeronasal 1 receptor, C2 protein_id : NP_444462.1

name	V1rc22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21717683 GeneID:171195 MGI:2159458
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS] GO_function : GO:0005550 - pheromone binding [Evidence ISS]; GO:0016503 - pheromone receptor activity [Evidence ISS] [Evidence IEA]; GO:0004872 - receptor activity [Evidence ISS] [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0019236 - response to pheromone [Evidence ISS]; GO:0007606 - sensory perception of chemical stimulus [Evidence TAS] codon_start : 1 note : vomeronasal 1 receptor, C9 product : vomeronasal 1 receptor, C22 protein_id : NP_598938.1

name	EG626828 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255151 GeneID:626828 MGI:3649162
definition	codon_start : 1 product : similar to vomeronasal receptor V1RC16 protein_id : XP_896530.2

name	Abcg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6752944 CCDS:CCDS20195.1 GeneID:26357 MGI:1347061
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : mitoxantrone resistance protein 1 product : ATP-binding cassette, sub-family G, member 2 protein_id : NP_036050.1

name	Herc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27777642 CCDS:CCDS20196.1 GeneID:73998 MGI:1921248
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0004842 - ubiquitin-protein ligase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hect domain and RLD 3 protein_id : NP_082981.2

name	Nap1l5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946798 CCDS:CCDS20197.1 GeneID:58243 MGI:1923555
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006334 - nucleosome assembly [Evidence IEA] codon_start : 1 product : nucleosome assembly protein 1-like 5 protein_id : NP_067407.1

name	D430015B01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956368 GeneID:58909 MGI:1889842
definition	codon_start : 1 product : family with sequence similarity 13, member A1 protein_id : NP_705802.1

name	Tigd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487251 GeneID:68140 MGI:1915390
definition	GO_component : GO:0000775 - chromosome, pericentric region [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] codon_start : 1 product : tigger transposable element derived 2 homolog protein_id : NP_001074614.1

name	Gprin3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34147240 CCDS:CCDS20199.1 GeneID:243385 MGI:1924785
definition	codon_start : 1 product : GPRIN family member 3 protein_id : NP_899006.1

name	LOC100041514 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041514
definition	number : 1 pseudo : _no_value

name	LOC626649 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626649
definition	number : 1 pseudo : _no_value

name	LOC626659 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626659
definition	number : 1 pseudo : _no_value

name	LOC626672 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626672
definition	number : 1 pseudo : _no_value

name	LOC626672 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626672
definition	number : 2 pseudo : _no_value

name	LOC666893 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666893
definition	number : 1 pseudo : _no_value

name	LOC100041571 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041571
definition	number : 1 pseudo : _no_value

name	LOC100041571 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041571
definition	number : 2 pseudo : _no_value

name	LOC100041571 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041571
definition	number : 3 pseudo : _no_value

name	LOC100041571 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041571
definition	number : 4 pseudo : _no_value

name	LOC100041571 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041571
definition	number : 5 pseudo : _no_value

name	LOC626724 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626724
definition	number : 1 pseudo : _no_value

name	LOC626817 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:626817
definition	number : 1 pseudo : _no_value

name	LOC666954 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666954
definition	number : 1 pseudo : _no_value

name	EG634166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634166
definition	number : 1 pseudo : _no_value

name	EG634166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634166
definition	number : 2 pseudo : _no_value

name	EG634166 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:634166
definition	number : 3 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:130937
definition	standard_name : D6Mit385

name	(CDS detail)
type	STS
link
xref	UniSTS:494238
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489277
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:495334
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489277
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492637
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:152622
definition	standard_name : D11S3380

name	(CDS detail)
type	STS
link
xref	UniSTS:494019
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:487437
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:488215
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:495561
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:488286
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:489276
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:479302
definition	standard_name : V1rc17

name	(CDS detail)
type	STS
link
xref	UniSTS:125061
definition	standard_name : MHAa15b9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:236108
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:492643
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484926
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:494017
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:488213
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:494024
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:487437
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:488215
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:125061
definition	standard_name : MHAa15b9.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:225011
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:159513
definition	standard_name : AI428558

name	(CDS detail)
type	STS
link
xref	UniSTS:220668
definition	standard_name : RH138581

name	(CDS detail)
type	STS
link
xref	UniSTS:179382
definition	standard_name : AI646603

name	(CDS detail)
type	STS
link
xref	UniSTS:271813
definition	standard_name : PMC196544P2

name	(CDS detail)
type	STS
link
xref	UniSTS:250383
definition	standard_name : AI409755

name	(CDS detail)
type	STS
link
xref	UniSTS:159509
definition	standard_name : AI462012

name	(CDS detail)
type	STS
link
xref	UniSTS:235455
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130664
definition	standard_name : D6Mit122

name	LOC666928 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255201 GeneID:666928
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 55 Proteins product : similar to vomeronasal receptor V1RC18 pseudo : _no_value transcript_id : XR_033790.1

clone name	MSMg01-057B07
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-488B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515B06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-146F11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-367M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443G18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177H11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-384L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-400L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332L18
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-367M08
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-365M06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-177I12
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-401P04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-144K02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-377L04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506N05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-309M15
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-455M05
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-096F10
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-359N24
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-506M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-548H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-127K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-271D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544K11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-167N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-422M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-097B24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372B16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-317L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049P11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-207L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-341F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-096B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-453O23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-490M01
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-218M02
singlet/doublet	singlet
plural/unique	plural

clone name	B6Ng01-270I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-107I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-089F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-117M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-148G09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-081I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-175O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-133C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-242L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-322H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012M20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-214B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286O16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009J23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-245J13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-334D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-042H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-082I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-019B10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-336J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-328J17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-119K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-157N03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328D14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286F17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058B15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-181I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-113D04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326I04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328B19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144H09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086J08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-012M20.b	B6Ng01-012M20.g
ACC	DH847787	DH847788
length	961	1,148
definition	DH847787\|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M20, 5' end.	DH847788\|Mus musculus domesticus DNA, BAC clone: B6Ng01-012M20, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccttctggcgatgatgtacgcttggcctgagattttaactttcat ataaaatcacagaaattcctaggggttcttgtggagcctatcctggttct tgtgtctatcacagactcctaacttctgacaccccatcaggcatggctaa ttgaggctgaaacccatgacagctttgaaattggtccaacactaaagcat aaactggcttaaaacgagaagttttttataatttgattttatggtttgtg tgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcattataattgctagtatgg aggttgtacatgtgtatgtgtatgtgcatatccatacctgcagaagtggt aggccagaagtaattttctccgtatatttaaagatcatctctcactgaac ctttttaaaggcaagagtctcttgaactagacggctcgacagtgagctta gggaatatgcacgcctgtcccagcctgttccagtgctgacattacagatg gcttttcatgtgcttggtgggggtcctaatttgtgtccttgtgcttgtag ggcagacttgtaacttactgaactatctcaccagcccaaacatagattac aatgtttgtattgctgtgacaaaggtcatgcatgtgcctacagattcaag tgaaaatctgtgaaaaagagattacaagctgccacatgctccctttggga tgaaagaaaaacagaacagacccaaataagcacctgtcacattgcttttt catttcttccctctcttttctataagaggtccattatccttcctgctcgt ctgttacctaaatcccatcctatccctatctacttcagtctgactttccc acacaggtgaccgtgcagttgagattcctaaagcaaagctgtgcacgtgg gcacgtgcctgcagtccctctctcatgaggtaaaggaggaaccccccatt attaccgagtt	gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat tccacctcacaccagtcagaatagctaagatcaaaaattcaggtgacagc agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg ggattgcaggcttgtacaaccactctggaaatcagtctgtcggttcctca gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc atatatccagaagatgccccaactggtaagaagggcacatgctccactat gttcatagcagccttatttataatagccagaagctggaaagaacctagat gcccctcaacagaggaatggatacaaaaaatgtggtacatctacacaatg gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc taggatacccaagatataagatacaatttcctaaacacatgaaactcaag aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa caaaacacccatggaaggagttacagagacaaagtttggagctgagatga aaggatggaccatgtagagactgccatatccagggatccaccccataatc agcatccaaacgctgacaccattgcatacactagcaagattttatggaaa ggacccagatgtagctgtctcgtgtgagactatgcccggggcctagcaaa cacagaagtggatgctcacagtcagctaatggatggatcacaggctccca atggagagcttgagaaagtacccaagagctaaagggatctgcaccctaat agtgaacaacatatgactacagtacctcgagctcttgacctctagctgca tttgtattcaaagatgcttagtcgcatcactgcagagagtcattggacat gcaaccttatatgccagtacaggaacgccaggtcaaaatggcaatggt
quality values	Open. Hide. 61 43 24 30 61 61 61 61 61 61 61 61 61 61 61 43 38 61 49 36 49 61 55 49 55 61 23 27 43 28 23 22 28 28 59 61 59 36 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 52 41 37 37 37 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 44 61 61 61 61 55 55 55 37 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 59 59 61 61 52 45 59 50 59 52 59 59 59 61 59 61 59 59 59 59 59 61 61 59 59 52 52 59 61 61 61 61 59 61 59 59 61 59 59 61 59 61 61 59 61 59 61 61 61 59 59 59 59 59 59 59 59 59 59 59 59 59 59 61 38 49 38 52 49 52 61 59 52 36 59 52 36 36 55 41 41 59 41 61 49 59 59 39 59 59 41 59 52 49 43 52 41 36 52 43 49 52 36 39 52 52 52 59 52 41 45 52 49 36 59 41 59 52 59 49 45 45 45 39 43 43 59 59 59 52 38 41 34 36 36 41 40 36 36 39 39 59 43 59 59 38 59 38 52 49 49 49 43 43 52 43 49 52 38 43 27 59 43 31 52 43 43 49 27 37 43 38 43 49 59 55 31 52 52 43 49 32 52 52 55 55 55 55 49 41 43 36 52 30 55 55 55 61 52 52 52 49 43 16 43 49 39 52 52 28 37 39 30 28 41 52 43 52 37 52 43 37 47 52 52 55 52 24 49 52 52 52 41 52 47 55 50 43 29 41 50 41 55 55 50 55 50 50 24 41 49 49 49 50 37 37 49 35 35 38 24 32 30 25 29 43 36 43 43 37 38 50 43 49 50 50 23 28 19 11 10 21 50 37 43 19 43 37 37 30 30 26 50 55 55 55 43 50 36 37 50 43 35 32 35 35 21 14 14 19 14 19 35 18 25 35 43 20 10 24 21 35 17 23 20 21 52 43 29 43 45 19 31 43 31 8 24 28 24 24 27 38 34 35 27 39 50 33 39 47 24 31 10 14 8 17 9 23 24 32 39 38 24 61 61 50 42 45 50 29 33 53 39 12 30 10 14 21 21 16 24 23 38 31 26 26 24 42 39 38 20 13 34 34 24 26 24 30 8 39 36 25 9 8 8 9 17 24 27 33 27 24 16 11 16 24 28 14 13 16 16 18 11 22 27 24 26 30 28 29 38 20 30 39 30 26 8 26 32 38 42 31 24 23 16 28 25 27 28 19 42 15 20 33 14 14 23 33 36 14 8 21 8 16 19 20 45 38 30 24 34 18 24 21 32 33 25 30 35 13 9 26 22 8 32 47 14 19 24 10 10 19 27 26 17 27 8 38 31 25 33 17 33 19 35 28 12 18 8 39 30 28 14 15 12 16 31 20 38 45 10 12 42 23 19 22 27 18 22 8 8 30 30 39 24 19 13 19 26 10 14 21 24 14 9 17 16 6 16 10 9 5 7 23 10 45 33 22 35 17 19 16 9 27 24 38 15 19 28 32 37 16 40 40 15 38 27 29 20 16 5 13 13 20 30 11 18 27 38 32 34 12 17 17 12 19 10 16 37 20 33 20 50 9 16 7 14 13 17 12 12 22 27 22 20 34 30 16 15 15 33 20 16 27 19 7 12 8 6 4 10 17 7 8 14 16 20 23 12 23 31 26 20 11 6 17 19 24 24 20 8 5 8 14 10 8 11 18 8 5 39 29 33 28 44 24 30 21 12 25 22 10 9 9 21 14 12 11 9 8 8 5 5 9 8 9 9 6 11 27 45 9	Open. Hide. 61 61 43 49 55 55 61 49 38 61 59 59 59 59 41 61 61 52 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 52 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 55 55 61 59 61 59 59 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 61 61 61 61 59 59 59 61 59 61 61 59 61 59 61 59 59 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 52 61 55 61 55 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 50 61 61 61 61 55 55 55 61 61 61 61 61 61 50 61 47 61 61 61 61 61 61 61 61 61 61 52 53 61 37 37 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 50 61 52 61 61 61 61 61 52 53 53 53 53 53 53 53 53 53 50 61 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 53 47 47 53 46 47 53 61 53 61 61 57 57 53 57 53 57 53 53 47 47 53 53 53 47 43 53 53 38 45 52 50 32 47 47 47 47 53 57 57 53 57 47 30 34 46 57 46 53 50 52 42 53 53 53 47 53 43 52 53 57 57 57 52 57 57 53 53 53 53 57 45 47 53 57 57 53 52 47 47 53 53 50 53 47 57 52 50 53 57 43 47 57 47 52 45 45 47 52 41 52 47 47 47 47 53 52 41 32 43 38 53 39 53 38 40 50 46 41 46 52 53 27 41 30 53 53 53 57 47 52 42 45 53 45 47 52 53 53 37 53 50 47 41 43 47 43 47 37 53 57 53 53 53 50 53 42 38 46 32 57 53 53 53 37 36 53 57 53 42 41 24 46 57 52 57 50 57 53 52 53 53 52 50 27 38 53 38 39 39 25 12 19 30 26 20 35 34 35 37 27 53 52 36 38 57 46 40 37 53 36 37 45 45 39 45 30 29 25 34 30 36 52 41 30 33 16 44 40 35 40 44 32 44 41 40 46 28 31 24 30 44 53 34 44 57 26 30 33 40 18 32 53 31 46 16 32 29 24 37 46 24 19 45 23 29 32 40 29 13 19 23 31 31 31 35 34 48 30 32 28 31 32 20 32 25 39 29 39 23 45 27 34 51 46 29 29 11 29 21 22 33 27 27 26 33 18 20 29 34 33 28 29 30 29 9 27 22 30 23 29 30 29 30 29 29 24 23 29 29 20 21 29 29 29 28 29 32 36 24 29 29 29 18 39 21 21 28 26 14 51 51 29 27 29 36 30 29 51 39 21 27 19 22 36 31 19 10 29 31 33 38 28 23 23 30 24 29 31 30 29 24 18 30 23 23 34 12 28 14 29 23 28 22 10 34 15 32 41 36 19 7 15 29 34 15 24 19 38 28 19 14 16 22 20 28 32 21 25 17 22 19 18 25 24 28 28 19 22 15 15 26 34 26 28 33 30 17 32 20 16 18 13 10 18 21 12 26 15 14 11 4 6 5 8 15 8 30 19 4 11 25 21 23 9 8 7 12 26 27 22 34 32 14 29 32 28 9 9 14 23 13 5 4 3 4 5 13 25 29 18 30 15 11 36 10 7 17 12 26 21 12 20 6 12 17 14 8 7 8 5 15 8 17 6 10 8 9 12 26 16 31 12 11 6 20 7 12 8 4 3 9 13 9 22 12 4 5 6 8 6 23 11 5 6 20 16 17 15 8 11 14 23 20 23 16 7 6 16 11 10 4 4 8 14 8 9 14 5 19 30 9 10 18 10 9 3 4 13 10 4 5 5 10 4 3 7 10 3 4 4 6 14 13 3 4 3 7 7 1 9 6 6 10 7 5 3 5 16 20 15 7 17 16 3 4 20 20 6 5 4 7 5 10 7 2 3 9 9 8 6 17 11 4 4 8 8 15 12 5 13 13 4 15 15 19 23 4 1 5 4 1 4 13 3 4 3 2

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_58809256_58810219
seq2: B6Ng01-012M20.b_46_1006 (reverse)

seq1  AACTCGGTATGTAGTGGGGGCTTCCTCCTTTTACCTCCTGAGTGAAGGGA  50
      |||||||||  || |||||| ||||||| |||||||| |||| | |||||
seq2  AACTCGGTA-ATAATGGGGGGTTCCTCC-TTTACCTCATGAGAG-AGGGA  47

seq1  CTGCAGGCACGTGCCACCGTGCACAGCTTTGCTTTAGGAAGTCTCAACTG  100
      |||||||||||||||  ||||||||||||||||||||||| |||||||||
seq2  CTGCAGGCACGTGCCCACGTGCACAGCTTTGCTTTAGGAA-TCTCAACTG  96

seq1  CACGGTCACCTGTGTAGGGAAAGTCAGACTGAAGTAGATAGGGAAAGGAA  150
      ||||||||||||||| |||||||||||||||||||||||||||| |||| 
seq2  CACGGTCACCTGTGT-GGGAAAGTCAGACTGAAGTAGATAGGGATAGGAT  145

seq1  GGGATTTAGGTAAACAGACGAGCAGG-AGGATAATGGACCTCTTATAGAA  199
      ||||||||||| |||||||||||||| |||||||||||||||||||||||
seq2  GGGATTTAGGT-AACAGACGAGCAGGAAGGATAATGGACCTCTTATAGAA  194

seq1  AAGAGAGGGAAGAAATGAAAAAGCAATGTGACAGGTGCTTATTTGGGTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGGAAGAAATGAAAAAGCAATGTGACAGGTGCTTATTTGGGTCT  244

seq1  GTTCTGTTTTTCTTTCATCCCAAAGGGAGCATGTGGCAGCTTGTTAATCT  299
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GTTCTGTTTTTCTTTCATCCCAAAGGGAGCATGTGGCAGCTTG-TAATCT  293

seq1  C-TTTTCACAGATTTTCACTTG-ATCTGTAGGCACATGCATGACCTTTGT  347
      | |||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CTTTTTCACAGATTTTCACTTGAATCTGTAGGCACATGCATGACCTTTGT  343

seq1  CACAGCAATAC-AACATTGTAATCTATGTTTGGGCTGGTGAGATAGTTCA  396
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CACAGCAATACAAACATTGTAATCTATGTTTGGGCTGGTGAGATAGTTCA  393

seq1  GTAAGTTACAAGTCTGCCCTACAAGCACAAGGACACAAATTAGGACCCCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTTACAAGTCTGCCCTACAAGCACAAGGACACAAATTAGGACCCCC  443

seq1  ACCAAGCACATGAAAAGCCATCTGTAATGTCAGCACTGGAACAGGCTGGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCACATGAAAAGCCATCTGTAATGTCAGCACTGGAACAGGCTGGG  493

seq1  ACAGGCGTGCATATTCCCTAAGCTCACTGTCGAGCCGTCTAGTTCAAGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCGTGCATATTCCCTAAGCTCACTGTCGAGCCGTCTAGTTCAAGAG  543

seq1  ACTCTTGCCTTTAAAAAGGTTCAGTGAGAGATGATCTTTAAATATACGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTGCCTTTAAAAAGGTTCAGTGAGAGATGATCTTTAAATATACGGA  593

seq1  GAAAATTACTTCTGGCCTACCACTTCTGCAGGTATGGATATGCACATACA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTACTTCTGGCCTACCACTTCTGCAGGTATGGATATGCACATACA  643

seq1  CATACACATGTACAACCTCCATACTAGCAATTATAATGCACGCACACACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACACATGTACAACCTCCATACTAGCAATTATAATGCACGCACACACA  693

seq1  CACACACACACACACACACACAAACCATAAAATCAAATTATAAAAAACTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACAAACCATAAAATCAAATTATAAAAAACTT  743

seq1  CTCGTTTTAAGCCAGTTTATGCTTTAGTGTTGGACCAATTTCAAAGCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTTTAAGCCAGTTTATGCTTTAGTGTTGGACCAATTTCAAAGCTGT  793

seq1  CATGGGTTTCAGCCTCAATTAGCCATGCCTGATGGGGTGTCAGAAGTTAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGTTTCAGCCTCAATTAGCCATGCCTGATGGGGTGTCAGAAGTTAG  843

seq1  GAGTCTGTGATAGACACAAGAACCAGGATAGGCTCCACAAGAACCCCTAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGTGATAGACACAAGAACCAGGATAGGCTCCACAAGAACCCCTAG  893

seq1  GAATTTCTGTGATTTTATATGAAAGTTAAAATCTCAGGCCAAGCGTACAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCTGTGATTTTATATGAAAGTTAAAATCTCAGGCCAAGCGTACAT  943

seq1  CATCGCCAGAAGGAATTC  964
      ||||||||||||||||||
seq2  CATCGCCAGAAGGAATTC  961

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information