BAC Information

Click to search

BAC

Clone NameB6Ng01-014C22
Chromosome6 (Build37)
Map Location 103,888,044 - 103,889,183
singlet/doubletsinglet
Overlap genenone
Upstream geneChl1, LOC666141
Downstream geneLOC100043345, Cntn6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014C22.bB6Ng01-014C22.g
ACCDH848798DH848799
length1,11575
definitionDH848798|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C22, 5' end.DH848799|Mus musculus domesticus DNA, BAC clone: B6Ng01-014C22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctgcaggtaaatttttggaaaaagtttgtgaatctttagaca
ttggtccatttaataaaaaaattattccttctttgggcaaaatagaggaa
gaacaaactgccattattttcataaacatttatggtgaaacattaaccac
tttatcctaagacatcaaatgtatactgcaatagaaacagcaaatcatga
cattctgacgagttttcatagcatattctacccagaaacctgcctttgct
actgaacattccttaaatgcttacccagagtcaaatactgatgtaaaagt
ttttcaggcttcttacattttaatccccttttatatcttctggtcgcttt
tccctagatccagtcagatggtgtcccattcaacaccattatgcttgtta
tagtaacacgccctactcttgccctttacatttgtgtcaaagctgggata
ggccactatggaataactgcaatttatgtgaccaacatgccactcacaag
aaagtgaatacattcccacaggtcaatctttcccaaggaggtatggaaca
tcatgtgcatatattccctgctccagttttcagagacagctcaacactgt
ggtctgcagagctctcaaggtcaagggctctggagcaggcttcagaccta
ctgggtacacagtgttcagcatgaaaacagactggctggactcagccttc
tttactgcactctttctaatcatctcactctcaggaaagacctgcatgcc
atcttttcacttagcctctgctttggaggggaaaactcaagagtacacac
agcacactgaactactgagaagcatactgcttcacacaggttttacaata
aaggcactgacatggtcctgtcacttcctcaaagttaagcttagtattaa
acttagatctggactcaacctgtccgactcagagccttgtattcaatgca
cccaggacttaatctctctgtttatagcaccacatgagaagtggagcatc
taacagtgtgacacgctactacgagcagataaccagacctgtgtaacatg
gaatgcatggtcatcataaaaatgccacaatcttccatatctaaatttct
cactcacgtcacacc
atatcctccatactcaaggaaaaactttatgtattgacctgtgtctgtag
caccagtactggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_103888044_103889183
seq2: B6Ng01-014C22.b_41_1155 (reverse)

seq1  GGTGTGAACGTGAGTGAGAAAATTAGGATATGGAAAGGATTGTGGGCATT  50
      |||||| |||||||||||||| ||| |||||||||  ||||||||   ||
seq2  GGTGTG-ACGTGAGTGAGAAATTTA-GATATGGAA--GATTGTGGCATTT  46

seq1  TTATGATGGAGCCATGCATTTCCATGGTTTACACAGGGTCCTGGTTTATC  100
      ||||||||   ||||||| |||||||  |||||||||   |||| |||||
seq2  TTATGATG--ACCATGCA-TTCCATG--TTACACAGG--TCTGG-TTATC  88

seq1  TGCTTCTGTAGGTAGCGTGGTTCACACTTGTTAGATTGCTTCCACTTTCT  150
      ||||   ||| ||||||||  |||||| ||||||| ||| ||||| ||||
seq2  TGCT--CGTA-GTAGCGTG--TCACAC-TGTTAGA-TGC-TCCAC-TTCT  129

seq1  CATGTGGTGCTAATAAACAGGAGGAAGATTAAGTCCTGGGTGCATTTGAA  200
      ||||||||||| ||||||| |||  ||||||||||||||||||| |||||
seq2  CATGTGGTGCT-ATAAACA-GAG--AGATTAAGTCCTGGGTGCA-TTGAA  174

seq1  TACAAGGCTCTGAGTCGGACAGGTTGAGTCCAGATCTAAGTTTAATACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGGCTCTGAGTCGGACAGGTTGAGTCCAGATCTAAGTTTAATACTA  224

seq1  AGCTTAACTTTGAGGAAGTGACAGGACCATGTCAGTGCCTTTATTGTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAACTTTGAGGAAGTGACAGGACCATGTCAGTGCCTTTATTGTAAA  274

seq1  ACCTGTGTGAAGCAGTATGCTTCTCAGTAGTTCAGTGTGCTGTGTGTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTGAAGCAGTATGCTTCTCAGTAGTTCAGTGTGCTGTGTGTACT  324

seq1  CTTGAGTTTT-CCCTCCAAAGCAGAGGCTAAGTGAAAAGATGGCATGCAG  399
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTTTCCCCTCCAAAGCAGAGGCTAAGTGAAAAGATGGCATGCAG  374

seq1  GTCTTCCCTGAGAGTGAGATGATTAGAAAGAGTGCAGTAAAGAAGGCTGA  449
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCTGAGAGTGAGATGATTAGAAAGAGTGCAGTAAAGAAGGCTGA  424

seq1  GTCCAGCCAGTCTGTTTTCATGCTGAACACTGTGTACCCAGTAGGTCTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCCAGTCTGTTTTCATGCTGAACACTGTGTACCCAGTAGGTCTGA  474

seq1  AGCCTGCTCCAGAGCCCTTGACCTTGAGAGCTCTGCAGACCACAGTGTTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCTCCAGAGCCCTTGACCTTGAGAGCTCTGCAGACCACAGTGTTG  524

seq1  AGCTGTCTCTGAAAACTGGAGCAGGGAATATATGCACATGATGTTCCATA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCTCTGAAAACTGGAGCAGGGAATATATGCACATGATGTTCCATA  574

seq1  CCTCCTTGGGAAAGATTGACCTGTGGGAATGTATTCACTTTCTTGTGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGGGAAAGATTGACCTGTGGGAATGTATTCACTTTCTTGTGAGT  624

seq1  GGCATGTTGGTCACATAAATTGCAGTTATTCCATAGTGGCCTATCCCAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGTTGGTCACATAAATTGCAGTTATTCCATAGTGGCCTATCCCAGC  674

seq1  TTTGACACAAATGTAAAGGGCAAGAGTAGGGCGTGTTACTATAACAAGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACAAATGTAAAGGGCAAGAGTAGGGCGTGTTACTATAACAAGCA  724

seq1  TAATGGTGTTGAATGGGACACCATCTGACTGGATCTAGGGAAAAGCGACC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGTGTTGAATGGGACACCATCTGACTGGATCTAGGGAAAAGCGACC  774

seq1  AGAAGATATAAAAGGGGATTAAAATGTAAGAAGCCTGAAAAACTTTTACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATATAAAAGGGGATTAAAATGTAAGAAGCCTGAAAAACTTTTACA  824

seq1  TCAGTATTTGACTCTGGGTAAGCATTTAAGGAATGTTCAGTAGCAAAGGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTATTTGACTCTGGGTAAGCATTTAAGGAATGTTCAGTAGCAAAGGC  874

seq1  AGGTTTCTGGGTAGAATATGCTATGAAAACTCGTCAGAATGTCATGATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTGGGTAGAATATGCTATGAAAACTCGTCAGAATGTCATGATTT  924

seq1  GCTGTTTCTATTGCAGTATACATTTGATGTCTTAGGATAAAGTGGTTAAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTCTATTGCAGTATACATTTGATGTCTTAGGATAAAGTGGTTAAT  974

seq1  GTTTCACCATAAATGTTTATGAAAATAATGGCAGTTTGTTCTTCCTCTAT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCACCATAAATGTTTATGAAAATAATGGCAGTTTGTTCTTCCTCTAT  1024

seq1  TTTGCCCAAAGAAGGAATAATTTTTTTATTAAATGGACCAATGTCTAAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCAAAGAAGGAATAATTTTTTTATTAAATGGACCAATGTCTAAAG  1074

seq1  ATTCACAAACTTTTTCCAAAAATTTACCTGCAGGAGAATTC  1140
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACAAACTTTTTCCAAAAATTTACCTGCAGGAGAATTC  1115