BAC Information

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BAC

Clone NameB6Ng01-014N23
Chromosome6 (Build37)
Map Location 34,801,756 - 34,968,338
singlet/doubletdoublet
Overlap geneAgbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Upstream geneExoc4, Lrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1
Downstream geneCnot4, Nup205, 1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-014N23.bB6Ng01-014N23.g
ACCDH849292DH849293
length1,134571
definitionDH849292|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N23, 5' end.DH849293|Mus musculus domesticus DNA, BAC clone: B6Ng01-014N23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(34,801,756 - 34,802,757)(34,967,767 - 34,968,338)
sequence
gaattcataattttagtcagccccaaaggaatctcattggccatatggtt
taacagcacaatttcatcaagcatttaaagaagtggttttcactctatgc
tgtaaccctttaacacagttcttcatgttgtggtggcccccagccataaa
attatttcactgctacttcataacagtaattttgctactgttataaattg
taaatatataatatgcaggatatctgatatatgacaccaaagagttgcaa
cccacaggttaaaaaccaaagatttaagaataattaataccagttctgca
gtgacttatagaaaatgagaaaataattcatagttcactttatgaagcta
ctattggcatgataccaaaatcagtcaaagagagaatcaaaattttaaaa
atcaagaaatttaatcatattagcaaatagaattcaatactaaattttaa
aagaattatgatttaccttttcacctatttcaacaagtccagaatggttc
agtgctctaacaagcagtataaccctaaatttttgcaagatagagaagaa
aattcacattatgatattaattggtacaatataaatttttgtgattttaa
aagaactatcagaagagaaggaacagagggcctcatgcagcttgatggag
tccactcttaccattcacacacgctcactcaccactgtgccagttcttga
cacagcaactagacaagaaaaagaaaagggaagaacacagcatctgtttg
tgaaagtggtgttctctatgtagaatatcacatagcatctgtttgtgaaa
gtggtattctctatgtagaatatcacatagcatctgtttgtgaaagtggt
attctctatgtagaatatcacatagcatttctttgtgaaagtagtgttct
ctatgtagatatcacatagcatctgtgaaagtgtgttctctatgtagaat
atcacatagcatctgtttgtgaaagtgtgttcttctatgtagaatatcac
atagcatctgtttggaaagtggtgtttctctatgtagatatcacatagca
tctggtttggaagttgtgttcttatggtaggacactcagatttgttaaac
tacaacaagtcctcaagtccgaaatatgacaaca
cctttgaaaattgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgcgcacgt
gtgcgcgtgcatgcatgaatttatatgcacacactgatctgaggaagcga
gtatgtaattttcagaagtcactctgggagctgggcagaagggttacacc
ttgtgttgggagacaactgtgcctcttaagccctcagtcagagttgaaga
aaacagttaaggcttaagagaaattaatagtgcgataggccttttggtat
gtggtctggataatttcaacatttgaaaagcaaaacactgctaaatgggc
ttgctttgctacagatcagaaatacttctcataccaattcagttgcagga
attcgtcgtgcagaatgcagacaaataggcccagcattcctttgtgtggg
atcacagatcttgtagcagtgctagaactatttgttacacacacggcttt
cttctgggacttggctccatggacttggccagctgtttttgcttgtgttt
taaaaatgacagagataatgtggcagcggggagagccatttttccctttc
atttgtgaccatgagtaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_34801756_34802757
seq2: B6Ng01-014N23.b_197_1179

seq1  TTATTTCACTGCTACTTCATAACAGTAATTTTGCTACTGTTATAAATTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCACTGCTACTTCATAACAGTAATTTTGCTACTGTTATAAATTGT  50

seq1  AAATATATAATATGCAGGATATCTGATATATGACACCAAAGAGTTGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATAATATGCAGGATATCTGATATATGACACCAAAGAGTTGCAAC  100

seq1  CCACAGGTTAAAAACCAAAGATTTAAGAATAATTAATACCAGTTCTGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGTTAAAAACCAAAGATTTAAGAATAATTAATACCAGTTCTGCAG  150

seq1  TGACTTATAGAAAATGAGAAAATAATTCATAGTTCACTTTATGAAGCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTATAGAAAATGAGAAAATAATTCATAGTTCACTTTATGAAGCTAC  200

seq1  TATTGGCATGATACCAAAATCAGTCAAAGAGAGAATCAAAATTTTAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGCATGATACCAAAATCAGTCAAAGAGAGAATCAAAATTTTAAAAA  250

seq1  TCAAGAAATTTAATCATATTAGCAAATAGAATTCAATACTAAATTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAATTTAATCATATTAGCAAATAGAATTCAATACTAAATTTTAAA  300

seq1  AGAATTATGATTTACCTTTTCACCTATTTCAACAAGTCCAGAATGGTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTATGATTTACCTTTTCACCTATTTCAACAAGTCCAGAATGGTTCA  350

seq1  GTGCTCTAACAAGCAGTATAACCCTAAATTTTTGCAAGATAGAGAAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCTAACAAGCAGTATAACCCTAAATTTTTGCAAGATAGAGAAGAAA  400

seq1  ATTCACATTATGATATTAATTGGTACAATATAAATTTTTGTGATTTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACATTATGATATTAATTGGTACAATATAAATTTTTGTGATTTTAAA  450

seq1  AGAACTATCAGAAGAGAAGGAACAGAGGGCCTCATGCAGCTTGATGGAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTATCAGAAGAGAAGGAACAGAGGGCCTCATGCAGCTTGATGGAGT  500

seq1  CCACTCTTACCATTCACACACGCTCACTCACCACTGTGCCAGTTCTTGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCTTACCATTCACACACGCTCACTCACCACTGTGCCAGTTCTTGAC  550

seq1  ACAGCAACTAGACAAGAAAAAGAAAAGGGAAGAACACAGCATCTGTTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAACTAGACAAGAAAAAGAAAAGGGAAGAACACAGCATCTGTTTGT  600

seq1  GAAAGTGGTGTTCTCTATGTAGAATATCACATAGCATCTGTTTGTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGGTGTTCTCTATGTAGAATATCACATAGCATCTGTTTGTGAAAG  650

seq1  TGGTATTCTCTATGTAGAATATCACATAGCATCTGTTTGTGAAAGTGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTATTCTCTATGTAGAATATCACATAGCATCTGTTTGTGAAAGTGGTA  700

seq1  TTCTCTATGTAGAATATCACATAGCATTTCTTTGTGAAAGTAGTGTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTATGTAGAATATCACATAGCATTTCTTTGTGAAAGTAGTGTTCTC  750

seq1  TATGTAGAATATCACATAGCATCTGTGAAAGTGGTGTTCTCTATGTAGAA  800
      ||||||| |||||||||||||||||||||||| |||||||||||||||||
seq2  TATGTAG-ATATCACATAGCATCTGTGAAAGT-GTGTTCTCTATGTAGAA  798

seq1  TATCACATAGCATCTGTTTGTGAAAGTGGTGTTC-TCTATGTAGAATATC  849
      ||||||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TATCACATAGCATCTGTTTGTGAAAGT-GTGTTCTTCTATGTAGAATATC  847

seq1  ACATAGCATCTGTTTGTGAAAGTGGTG-TTCTCTATGTAGAATATCACAT  898
      |||||||||||||||| |||||||||| |||||||||||| |||||||||
seq2  ACATAGCATCTGTTTG-GAAAGTGGTGTTTCTCTATGTAG-ATATCACAT  895

seq1  AGCATCTGTTTGTGAAAGTGGTGTTCTCTATGTTAGAGCATCTCAAGGAA  948
      |||||||| || || |||| ||||||| |||| |||  || ||||    |
seq2  AGCATCTGGTT-TGGAAGTTGTGTTCT-TATGGTAGGACA-CTCA---GA  939

seq1  TTTGTTTTTAACTTAACAAACAAGTCCTTCTAGGTCTCAGAATATATGAC  998
      ||||  || ||||  || ||||||||| || ||   || ||| |||||||
seq2  TTTG--TTAAACT--AC-AACAAGTCC-TCAAG---TCCGAA-ATATGAC  979

seq1  AACA  1002
      ||||
seq2  AACA  983

seq1: chr6_34967767_34968338
seq2: B6Ng01-014N23.g_68_644 (reverse)

seq1  CTTTTACTCATGGTCACAAATGAA--GGGAAAATGGCTCT-CCCGCTGCC  47
      ||||||||||||||||||||||||  || ||||||||||| |||||||||
seq2  CTTTTACTCATGGTCACAAATGAAAGGGAAAAATGGCTCTCCCCGCTGCC  50

seq1  ACCTTATCTCTGTCATTTTT-AAACACAAGC-AAAACAGCTGGCCAAGTC  95
      || ||||||||||||||||| |||||||||| ||||||||||||||||||
seq2  ACATTATCTCTGTCATTTTTAAAACACAAGCAAAAACAGCTGGCCAAGTC  100

seq1  CATGGAGCCAAGTCCCAGAAGAAAGCCGTGTGTGTAACAAATAGTTCTAG  145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAGCCAAGTCCCAGAAGAAAGCCGTGTGTGTAACAAATAGTTCTAG  150

seq1  CACTGCTACAAGATCTGTGATCCCACACAAAGGAATGCTGGGCCTATTTG  195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTACAAGATCTGTGATCCCACACAAAGGAATGCTGGGCCTATTTG  200

seq1  TCTGCATTCTGCACGACGAATTCCTGCAACTGAATTGGTATGAGAAGTAT  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCATTCTGCACGACGAATTCCTGCAACTGAATTGGTATGAGAAGTAT  250

seq1  TTCTGATCTGTAGCAAAGCAAGCCCATTTAGCAGTGTTTTGCTTTTCAAA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATCTGTAGCAAAGCAAGCCCATTTAGCAGTGTTTTGCTTTTCAAA  300

seq1  TGTTGAAATTATCCAGACCACATACCAAAAGGCCTATCGCACTATTAATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAATTATCCAGACCACATACCAAAAGGCCTATCGCACTATTAATT  350

seq1  TCTCTTAAGCCTTAACTGTTTTCTTCAACTCTGACTGAGGGCTTAAGAGG  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTAAGCCTTAACTGTTTTCTTCAACTCTGACTGAGGGCTTAAGAGG  400

seq1  CACAGTTGTCTCCCAACACAAGGTGTAACCCTTCTGCCCAGCTCCCAGAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGTCTCCCAACACAAGGTGTAACCCTTCTGCCCAGCTCCCAGAG  450

seq1  TGACTTCTGAAAATTACATACTCGCTTCCTCAGATCAGTGTGTGCATATA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTGAAAATTACATACTCGCTTCCTCAGATCAGTGTGTGCATATA  500

seq1  AATTCATGCATGCACGCGCACACGTGCGCACTCACACACACACACACACA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATGCATGCACGCGCACACGTGCGCACTCACACACACACACACACA  550

seq1  CACACACACAATTTTCAAAGGGAATTC  572
      |||||||||||||||||||||||||||
seq2  CACACACACAATTTTCAAAGGGAATTC  577