BAC Information

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BAC

Clone NameB6Ng01-017I08
Chromosome6 (Build37)
Map Location 60,303,258 - 60,304,358
singlet/doubletsinglet
Overlap genenone
Upstream geneGprin3, EG634166, EG627108, EG434019, LOC671300, EG627178, LOC100041706, LOC100041717
Downstream geneA530053G22Rik, LOC667066, LOC100041726, Snca, ENSMUSG00000064018, Mmrn1, LOC100041756, LOC100041764, C130092O11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-017I08.bB6Ng01-017I08.g
ACCDH851182DH851183
length1,1601,084
definitionDH851182|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I08, 5' end.DH851183|Mus musculus domesticus DNA, BAC clone: B6Ng01-017I08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaaacacctgaaaaaatg
ttcagcatccttaatcatcaggaaatgcaaatcaaaacaaccctgagatt
ccatctcacacctgtcagaatggctaagatcaaaaactgaggtgacaaca
gacactggcaaggatgttgagaaagagaaacactcctccatttttggtgg
gattgcaagcttgtacaaccattctggaaatcagtttggcgattcctcag
aaaattggacatagtactaccggaggatcctgcaatacacctcctgggca
tatatccagaagatgccccaactggtaagaaggtcacatgctccactatg
ttcatagcggtcttatttgtaatagccagaaggtggaaagaacctagatg
cccttcaactgaggaatggatataaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaataatgaatttatgaaattcctgggcaat
ggttggacctggagggcatcatcctgagttaggtaaaccaatcacaaagg
aactcaaatgatatgttctcgctgaaaagtggatattagcccagaaactt
agaatacccaagatataagatccaatttgcaaaacacataaaactcaaga
agaactgagatcaaagtgtggacactttgccccttcttagaactgggaac
aaaacacccatggaaggagttacagaaacaaagtttggagcagagacaaa
aggatggaccatctagagactgccatattcagggatccatcccataatca
gcctccaaacactgacaccattgcatacactagcaagattttgctgaaag
gacactgatatagctgtctcttgtaagagtatgccagggcctagcaaaca
cagatgtggatgctcacagtcagctattggatggatcacagagccccaat
cgaggagttagagaaagtacccaggagctaaagggaactgcaggcttata
gtggaacacatatgactacaagttaccggtgggagcctctggtctctagc
tgcatttgtattcaaaaggatggcttagtaggcattcactgaggagggtc
attgggtatgcaacttactgccagtaaggattgtcaggccaaattgggaa
tggtgtgtta
gaattcaaattattttctgtgtgaatcatgcttgaaaatgaaagaagtca
gtgcagtagaaaatgaataacgtgcccagaggaagtgtaacaacgacata
gagaagcacagatggataaagcagcaaaacagcctatccctgcagagatg
caacaaacaagtctacacgcctgagaaagagagcccatggcagaaaacac
tgcaccactgtccaatttgaagaaagaatgacatttttattggggttact
aacagtactatggatgcatgcctgctttcaatgaacagctataactctaa
agcacctattttgccagaaaacttaccttacactctcaagatctctacac
agcttgcaggcagatttacagaaagaacatctctctttcttcagttttct
gcttagatccattcccacccccagtggctatttactcccttttacaccat
cacaaggagcacttaagagcagtttagaattatttttgtgttttttcacc
tctacatgtgatcttttcccaccttagattgttccttgagcttctcaagt
atcccattccctcctatataaatttagagggaatgttgaaagttggaggg
acatctagtggtggcaggcagcctcctgtagaatataaagcttgagacaa
ttgaacaagcagttcagagacacaaaagcctatacctcagagatatatag
aaaagaaccttgtagacaatgggaaccaaaaattcaggaagctagtgtca
cacatatgtatgcaggcaagacattgtctcacctgaattaaaaataagta
aacctttaaaataaataaatttgaaagaaagaatcattgaattgtatgag
ttgggcctagaatttatgatataactttctctaccctagtgtagctggaa
tttcaggactatgctacttactctacaggattcatttaaatattgatata
tgtccatgatgctgaaactatcctccattccctttctataggtatactta
tatgcaatacaattaataagtactactcatgacataatgacacttcacag
cagctccaagtcaccatttgtgtatccacaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_60303258_60304358
seq2: B6Ng01-017I08.g_63_1146

seq1  GAATTCAAATTATTTTCTGTGTGAATCATGCTTGAAAATGAAAGAAGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTATTTTCTGTGTGAATCATGCTTGAAAATGAAAGAAGTCA  50

seq1  GTGCAGTAGAAAATGAATAACGTGCCCAGAGGAAGTGTAACAACGACATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGTAGAAAATGAATAACGTGCCCAGAGGAAGTGTAACAACGACATA  100

seq1  GAGAAGCACAGATGGATAAAGCAGCAAAACAGCCTATCCCTGCAGAGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCACAGATGGATAAAGCAGCAAAACAGCCTATCCCTGCAGAGATG  150

seq1  CAACAAACAAGTCTACACGCCTGAGAAAGAGAGCCCATGGCAGAAAACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAACAAGTCTACACGCCTGAGAAAGAGAGCCCATGGCAGAAAACAC  200

seq1  TGCACCACTGTCCAATTTGAAGAAAGAATGACATTTTTATTGGGGTTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCACTGTCCAATTTGAAGAAAGAATGACATTTTTATTGGGGTTACT  250

seq1  AACAGTACTATGGATGCATGCCTGCTTTCAATGAACAGCTATAACTCTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTACTATGGATGCATGCCTGCTTTCAATGAACAGCTATAACTCTAA  300

seq1  AGCACCTATTTTGCCAGAAAACTTACCTTACACTCTCAAGATCTCTACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACCTATTTTGCCAGAAAACTTACCTTACACTCTCAAGATCTCTACAC  350

seq1  AGCTTGCAGGCAGATTTACAGAAAGAACATCTCTCTTTCTTCAGTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCAGGCAGATTTACAGAAAGAACATCTCTCTTTCTTCAGTTTTCT  400

seq1  GCTTAGATCCATTCCCACCCCCAGTGGCTATTTACTCCCTTTTACACCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGATCCATTCCCACCCCCAGTGGCTATTTACTCCCTTTTACACCAT  450

seq1  CACAAGGAGCACTTAAGAGCAGTTTAGAATTATTTTTGTGTTTTTTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAGGAGCACTTAAGAGCAGTTTAGAATTATTTTTGTGTTTTTTCACC  500

seq1  TCTACATGTGATCTTTTCCCACCTTAGATTGTTCCTTGAGCTTCTCAAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATGTGATCTTTTCCCACCTTAGATTGTTCCTTGAGCTTCTCAAGT  550

seq1  ATCCCATTCCCTCCTATATAAATTTAGAGGGAATGTTGAAAGTTGGAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATTCCCTCCTATATAAATTTAGAGGGAATGTTGAAAGTTGGAGGG  600

seq1  ACATCTAGTGGTGGCAGGCAGCCTCCTGTAGAATATAAAGCTTGAGACAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGTGGTGGCAGGCAGCCTCCTGTAGAATATAAAGCTTGAGACAA  650

seq1  TTGAACAAGCAGTTCAGAGACACAAAAGCCTATACCTCAGAGATATATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACAAGCAGTTCAGAGACACAAAAGCCTATACCTCAGAGATATATAG  700

seq1  AAAAGAACCTTGTAGACAATGGGAACCAAAAATTCAGGAAGCTAGTGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAACCTTGTAGACAATGGGAACCAAAAATTCAGGAAGCTAGTGTCA  750

seq1  CACATATGTATGCAGGCAAGACATTGTCTCACCTGAATTAAAAATAAGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATGTATGCAGGCAAGACATTGTCTCACCTGAATTAAAAATAAGTA  800

seq1  AACCTTTAAAATAAATAAATTTGAAAGAAAGAATCATTGAATTGTATGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTAAAATAAATAAATTTGAAAGAAAGAATCATTGAATTGTATGAG  850

seq1  TT-GGCCTAGAATTTATGATATAACTTTCTCTACCCTAGTGTAGCTGGAA  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCTAGAATTTATGATATAACTTTCTCTACCCTAGTGTAGCTGGAA  900

seq1  TTTCAGGACTATGCTACTTACTCTACAGGATTCAATTTAAATATTGATAT  949
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTCAGGACTATGCTACTTACTCTACAGGATTC-ATTTAAATATTGATAT  949

seq1  AATGTCCAATGATGCTGAAAAACTATCCTCCATTCCCTTTCTATAGGTAT  999
       |||||| |||||||||  |||||||||||||||||||||||||||||||
seq2  -ATGTCC-ATGATGCTG--AAACTATCCTCCATTCCCTTTCTATAGGTAT  995

seq1  ACTTATATGCAAATACAAATTAAATAAAGTACTACTCCATGAACATAAAT  1049
      |||||||||| ||||| ||||||   |||||||||| |||| |||| |||
seq2  ACTTATATGC-AATAC-AATTAA--TAAGTACTACT-CATG-ACAT-AAT  1038

seq1  GACACTTCACAGCCAGCTCCAAAAGTCAACCAATTTGTGTATCCCACAAT  1099
      |||||||||||| |||||||  ||||||  | |||||||||| |||||||
seq2  GACACTTCACAG-CAGCTCC--AAGTCA--CCATTTGTGTAT-CCACAAT  1082

seq1  CT  1101
      ||
seq2  CT  1084