BAC Information

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BAC

Clone NameB6Ng01-023G19
Chromosome6 (Build37)
Map Location 111,461,296 - 111,462,239
singlet/doubletsinglet
Overlap geneGrm7
Upstream genenone
Downstream gene1700054K19Rik, Lmcd1, D630042P16Rik, LOC619975, Cav3, Oxtr
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023G19.bB6Ng01-023G19.g
ACCDH855348DH855349
length9371,182
definitionDH855348|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G19, 5' end.DH855349|Mus musculus domesticus DNA, BAC clone: B6Ng01-023G19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggggtgacaagttttcttctaaactggacagagataagaatca
acaaaccagctttgccaatctcttcaacgctcaagtgagtaaagattaga
ggaagaaatgattaaaattcgacttttgggtgatttcagaagatttcttt
atggccagtcttctaccctaaatggggtttgtataatcgatctttgatat
ttccttaaacagctgaggtacaagcaggtatcgctaatttaatagaaaca
tcagtgccatggtctcagttggaataaatttgtgcctaaagtcagaaaac
atgggctgaattgtgaaacgtaatgaaaactgattgtgtttagatgcagt
tccccagatagctcattcatgagctcaccgaagctttggctttgaggaac
cattactgcagaatgaatcaatactaagcaggttgaagacaggtcatgtg
gtttattgatatttccatctgaaaatctcacaggtttttttccagacaaa
aatcagatgcaagaggattgtttgacacaaacttattatgggagtgttac
agaaagaagatgcagacaaaacagccaataggggagtgagcaagttgcag
tatccttcactcgttcctagaacagaaacagaaaatcaaggttaatttga
ggagacagactaaaactaagagtgaacttttgcggagctactggggtgcc
cattcagtctgaagtacttcatcattacttagcccttaatactaccatat
aaaataatgtattgtaccaatgagcagtactacactgaggtcgtctttct
aaagagtcacattgtctccctgacataaagggtaatgatggacacactgc
tctattagttagtttagtttgtttgtctcttttgtcttcataaggtagga
attcctatgcagctactctccttgatgacctattcca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctaagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagcattatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatataatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatta
aagggtggaccatgtagagactgccttatccagggatccaccccataatc
agcatccaaacgctgacaccatttgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacagggctctt
aatggaggagctagagaaagtatctaaggagctaagggatctgcaaccct
ataggtggatcaacattatgaactaccagtcctcggagctcctgacttct
agctgctaatgtatcaaagaggtctagtcggcctcacctggagagaagcc
aattgacacaaactttatatggcctcgaacaggggaactgccaggccaaa
aggggagtgtgcgggctaggagatgcggctag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_111461296_111462239
seq2: B6Ng01-023G19.b_44_980 (reverse)

seq1  TGGAATAGGTCATCAAGGAGAGTAGCTGCAGTAGGAATTCCTACCCTAAT  50
      |||||||||||||||||||||||||||||| |||||||||||| ||| ||
seq2  TGGAATAGGTCATCAAGGAGAGTAGCTGCA-TAGGAATTCCTA-CCTTAT  48

seq1  GAAAGACAAAAAGAAAACAAAACAAACTAAACTAAACTAATAGAGCAGTG  100
      | ||||| |||||| |   |||||||||||||| ||||||||||||||||
seq2  G-AAGAC-AAAAGAGA--CAAACAAACTAAACT-AACTAATAGAGCAGTG  93

seq1  TGTCCATCATTACCCTTTATGTCAGGGAGACAATGTGACTCTTTAGAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATCATTACCCTTTATGTCAGGGAGACAATGTGACTCTTTAGAAAG  143

seq1  ACGACCTCAGTGTAGTACTGCTCATTGGTACAATACATTATTTTATATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGACCTCAGTGTAGTACTGCTCATTGGTACAATACATTATTTTATATGG  193

seq1  TAGTATTAAGGGCTAAGTAATGATGAAGTACTTCAGACTGAATGGGCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTAAGGGCTAAGTAATGATGAAGTACTTCAGACTGAATGGGCACC  243

seq1  CCAGTAGCTCCGCAAAAGTTCACTCTTAGTTTTAGTCTGTCTCCTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGCTCCGCAAAAGTTCACTCTTAGTTTTAGTCTGTCTCCTCAAAT  293

seq1  TAACCTTGATTTTCTGTTTCTGTTCTAGGAACGAGTGAAGGATACTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTTGATTTTCTGTTTCTGTTCTAGGAACGAGTGAAGGATACTGCAA  343

seq1  CTTGCTCACTCCCCTATTGGCTGTTTTGTCTGCATCTTCTTTCTGTAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCACTCCCCTATTGGCTGTTTTGTCTGCATCTTCTTTCTGTAACA  393

seq1  CTCCCATAATAAGTTTGTGTCAAACAATCCTCTTGCATCTGATTTTTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCATAATAAGTTTGTGTCAAACAATCCTCTTGCATCTGATTTTTGTC  443

seq1  TGGAAAAAAACCTGTGAGATTTTCAGATGGAAATATCAATAAACCACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAAAACCTGTGAGATTTTCAGATGGAAATATCAATAAACCACATG  493

seq1  ACCTGTCTTCAACCTGCTTAGTATTGATTCATTCTGCAGTAATGGTTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTCTTCAACCTGCTTAGTATTGATTCATTCTGCAGTAATGGTTCCT  543

seq1  CAAAGCCAAAGCTTCGGTGAGCTCATGAATGAGCTATCTGGGGAACTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCAAAGCTTCGGTGAGCTCATGAATGAGCTATCTGGGGAACTGCA  593

seq1  TCTAAACACAATCAGTTTTCATTACGTTTCACAATTCAGCCCATGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACACAATCAGTTTTCATTACGTTTCACAATTCAGCCCATGTTTTC  643

seq1  TGACTTTAGGCACAAATTTATTCCAACTGAGACCATGGCACTGATGTTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTAGGCACAAATTTATTCCAACTGAGACCATGGCACTGATGTTTC  693

seq1  TATTAAATTAGCGATACCTGCTTGTACCTCAGCTGTTTAAGGAAATATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAATTAGCGATACCTGCTTGTACCTCAGCTGTTTAAGGAAATATCA  743

seq1  AAGATCGATTATACAAACCCCATTTAGGGTAGAAGACTGGCCATAAAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCGATTATACAAACCCCATTTAGGGTAGAAGACTGGCCATAAAGAA  793

seq1  ATCTTCTGAAATCACCCAAAAGTCGAATTTTAATCATTTCTTCCTCTAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGAAATCACCCAAAAGTCGAATTTTAATCATTTCTTCCTCTAAT  843

seq1  CTTTACTCACTTGAGCGTTGAAGAGATTGGCAAAGCTGGTTTGTTGATTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCACTTGAGCGTTGAAGAGATTGGCAAAGCTGGTTTGTTGATTC  893

seq1  TTATCTCTGTCCAGTTTAGAAGAAAACTTGTCACCCCTGAATTC  944
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTCTGTCCAGTTTAGAAGAAAACTTGTCACCCCTGAATTC  937