BAC Information

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BAC

Clone NameB6Ng01-023K21
Chromosome6 (Build37)
Map Location 61,655,090 - 61,656,013
singlet/doubletsinglet
Overlap geneC130092O11Rik
Upstream geneSnca, ENSMUSG00000064018, Mmrn1, LOC100041756, LOC100041764, LOC100042694
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023K21.bB6Ng01-023K21.g
ACCDH855529DH855530
length915860
definitionDH855529|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K21, 5' end.DH855530|Mus musculus domesticus DNA, BAC clone: B6Ng01-023K21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaagcacacccatatctaatttctcactctctgttaaaacta
acaaaaaatgctgggagaactttgggaatagaagaatcatatgttaggtt
atcataatttatgtatgactttcccacactttcttcttttcttttgtcca
gcactcattaaacattaggtaatatatcagttcaactacttacacaatat
ctataagatgcaacaattggaaattatgcctgtgtctatgctgtgtctgt
gctgaagttacattgccttgtatcaactatatgtctgtcatatagttctg
aaccatttctacaacaagataccacaaagtatcgcaaggtcagtagattc
gaaaataggtttctaggttctcagaggtcttgaaattatagacccaagat
gttgataaactatgctccttataaaagcaataatctttctctccatccct
ctctccttctctgcttcatcctcatcatcatgatcaccatcaccatcatg
accattatcctcatcatcaccagcacaccatcacccccagcagcaatagc
agagtgtttccatctcagtcctaagatttatgaacagctttatgtatgtt
tgtttcctaggaatttcattgtgctgaagttacattgccttgtatcaaag
tattaagaactaggctactgaaagttaagcctggtggaatataattagac
tataaggctttcctctcttgaatgacttgggccaggcctggtaggagtaa
tattagttctcatgagcacttgagtataaagaaagacttccctccctagt
ttctgtttgccatattatcctatatattctcccacaatgtgtatcattgc
ccagacaattatctaaatttgaacgtgctgggacttgttcttatcttcag
actgagcgcttcttt
gaattcagtttctttgggttgatgtagtccaagacagagacacaaagcta
aaagcaagtgatcagtcatctgagtggaggaggaagttgtgttatgactt
gcttttttgataaacctgagtcaaggtatgtttttcctagtcttgttcag
agtgttggggagctaaaattatgtttaataatataattttaaacattagg
catcatatatatatatatatatatatatatatatatatattgatagctat
taacaatggggaattaaagctaaataaaatatttgtgagattaacatatt
tatagatgaacgtaacacataaatagacactgttttaaatgcactgacag
gagaggagcttggagggcattaagaagggagaatagcaagataaaagtga
tctgattatgcaaataggaaaaggggggctctttaaagaaagaggaggga
cgtaaacatgaaaaaaagaaggaattgggtaaaataacaacaaggatgtc
tttaaaattcaccaagaatcatactattaattacttacctaaaattaaaa
acaataatacatgtgattctacggataaatacacatacatagttttaata
aaaattttctcatctaaactgagggtaccttctacatgactcaaagacca
cttaacaaaaaccataataccaggcagagaactcttttgactagttggtt
atgattcagtgacattgaaaacatagagcctattgccttagtccttgtta
ccccagggggtgggaggtagtccttaaagtggaaagacacaatgtacttc
aaaaataaagcccagagacttatgagctagaattgacatgaatgcttcat
ctctgaggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_61655090_61656013
seq2: B6Ng01-023K21.b_42_956

seq1  GAATTCAACAAGCACACCCATATCTAATTTCTCACTCTCTGTTAAAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACAAGCACACCCATATCTAATTTCTCACTCTCTGTTAAAACTA  50

seq1  ACAAAAAATGCTGGGAGAACTTTGGGAATAGAAGAATCATATGTTAGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAATGCTGGGAGAACTTTGGGAATAGAAGAATCATATGTTAGGTT  100

seq1  ATCATAATTTATGTATGACTTTCCCACACTTTCTTCTTTTCTTTTGTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATTTATGTATGACTTTCCCACACTTTCTTCTTTTCTTTTGTCCA  150

seq1  GCACTCATTAAACATTAGGTAATATATCAGTTCAACTACTTACACAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCATTAAACATTAGGTAATATATCAGTTCAACTACTTACACAATAT  200

seq1  CTATAAGATGCAACAATTGGAAATTATGCCTGTGTCTATGCTGTGTCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGATGCAACAATTGGAAATTATGCCTGTGTCTATGCTGTGTCTGT  250

seq1  GCTGAAGTTACATTGCCTTGTATCAACTATATGTCTGTCATATAGTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAGTTACATTGCCTTGTATCAACTATATGTCTGTCATATAGTTCTG  300

seq1  AACCATTTCTACAACAAGATACCACAAAGTATCGCAAGGTCAGTAGATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTCTACAACAAGATACCACAAAGTATCGCAAGGTCAGTAGATTC  350

seq1  GAAAATAGGTTTCTAGGTTCTCAGAGGTCTTGAAATTATAGACCCAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATAGGTTTCTAGGTTCTCAGAGGTCTTGAAATTATAGACCCAAGAT  400

seq1  GTTGATAAACTATGCTCCTTATAAAAGCAATAATCTTTCTCTCCATCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATAAACTATGCTCCTTATAAAAGCAATAATCTTTCTCTCCATCCCT  450

seq1  CTCTCCTTCTCTGCTTCATCCTCATCATCATGATCACCATCACCATCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTCTCTGCTTCATCCTCATCATCATGATCACCATCACCATCATG  500

seq1  ACCATTATCCTCATCATCACCAGCACACCATCACCCCCAGCAGCAATAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTATCCTCATCATCACCAGCACACCATCACCCCCAGCAGCAATAGC  550

seq1  AGAGTGTTTCCATCTCAGTCCTAAGATTTATGAACAGCTTTATGTATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTTCCATCTCAGTCCTAAGATTTATGAACAGCTTTATGTATGTT  600

seq1  TGTTTCCTAGGAA-TTCA-TGTGCTGAAGTTACATTGCCTTGTATCAAAG  648
      ||||||||||||| |||| |||||||||||||||||||||||||||||||
seq2  TGTTTCCTAGGAATTTCATTGTGCTGAAGTTACATTGCCTTGTATCAAAG  650

seq1  TATTAAGAACTAGGCTACTGAAAGTTAAGCCTGGTGGAATATAATTAGAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAGAACTAGGCTACTGAAAGTTAAGCCTGGTGGAATATAATTAGAC  700

seq1  TATAAGGCTTTCCTCTCTTGAATGAC-TGGGCCAGGCCTGGTAGGAGT-A  746
      |||||||||||||||||||||||||| ||||||||||||||||||||| |
seq2  TATAAGGCTTTCCTCTCTTGAATGACTTGGGCCAGGCCTGGTAGGAGTAA  750

seq1  TATTAGTTCCCATGAGCACTTGAGTATAAAGAAAGACTTCCCTCCCTAGT  796
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTTCTCATGAGCACTTGAGTATAAAGAAAGACTTCCCTCCCTAGT  800

seq1  TTCTTGTTTGCCATATTATTCTATATATTCTCCCTACAATGTGTTATCAT  846
      ||| ||||||||||||||| |||||||||||||| |||||||| ||||||
seq2  TTC-TGTTTGCCATATTATCCTATATATTCTCCC-ACAATGTG-TATCAT  847

seq1  TGTCCCAAGACAATTATCTAAATATAGAACGTGCTGGGACCTTGTTCTTT  896
      ||  || |||||||||||||||| | ||||||||||||| ||||||| ||
seq2  TG--CCCAGACAATTATCTAAAT-TTGAACGTGCTGGGA-CTTGTTC-TT  892

seq1  ATCTTTCAGAACTGAGCTACATTTCTTT  924
      ||| ||||| ||||||   |  ||||||
seq2  ATC-TTCAG-ACTGAG---CGCTTCTTT  915