BAC Information

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BAC

Clone NameB6Ng01-024D16
Chromosome6 (Build37)
Map Location 132,923,205 - 133,038,500
singlet/doubletdoublet
Overlap geneTas2r109, EG667992, LOC100043634, Tas2r140
Upstream geneLOC639802, EG114600, Prb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131
Downstream geneLOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618, 5530400C23Rik, EG545884, EG626372, LOC100043649, LOC100043653, EG545886, LOC622962, Kap, LOC100043655, LOC100043656, LOC668063, Etv6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D16.bB6Ng01-024D16.g
ACCDH855930DH855931
length2671,051
definitionDH855930|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D16, 5' end.DH855931|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,923,205 - 132,923,471)(133,037,452 - 133,038,500)
sequence
agccagctgaggtactgtatctcctgatccagttagtccagttcacatgt
actgtgaagatattagaaaaatttccaggaaaaaaatataattaattctc
cctctccctccccttatccccttccctcctccccatcttcctccccctcc
atcctcttttctctatctctctttctctctctctccctctctcgatgaga
tgatgcttgctcataaactcaagtcttggaggattgtggagtgtgtgtgt
gtgtgtgtgtgtgtgtg
gaattcagaggaacaaaaatgtctacaagaattttaggtaacagagagct
tacaatgggaagcatccattggtccctgtgcaaacttaaatttgatgtgt
ttaatgttgtttttattttatatgtcagtctagattttgttgccaggtat
taattacaattccccaaaattatttgtccagaaatcaaatattgagacta
aatttgtataaaaaaaaactatcaaagccaatacaaataattatatcttg
attttgatgataaaactgagaattcagtgtttcttcctcatcatcaacaa
cagcaaaactaaaaaacaaacaaacaaacaaaagaacaaagcaaaaacaa
tagggtgctctggataaggtgtgtagtatgtggagaaagattaaactagc
tgccttggaaaatatataattttcacccaaaacactgtggacattagtga
tttgtattttcttggtactgtatatatgggtttttggcagtaaatgtttt
gaaagttcaagaattttatacacagagcattttagaagattgattaacac
atcttcattacttaactagaaactaaatcatccttccagtggcaatgaat
cctatcctatatttcacattaacatttattttaagtgtgaaattaataat
aggaaatttaggcagtgcatttttagcctgggtgaatatcatgggtggga
ctgggttcagaaaaagaaagatgtcgtcagtgttttagatcttcccctgc
tctggctctctccggaatctctgtgatctggacactaattgcaagtttat
tgggtattagccaccctacccagctctaataactagaaaaagtaaaagaa
ttatgaaaaaatattgaacagtgaccaatccattgcagcatctggcttgg
ctacatgacttcagcatcttctattttctcaagtatgctacactaaaaaa
actcgtttccttgaccagaagtgaaaccttaaaagctagtttattgccat
gctgccatatttgcccacattttcttaacatgttagtcataagcaaatat
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132923205_132923471
seq2: B6Ng01-024D16.b_41_307

seq1  AGCCAGCTGAGGTACTGTATCTCCTGATCCAGTTAGTCCAGTTCACATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGCTGAGGTACTGTATCTCCTGATCCAGTTAGTCCAGTTCACATGT  50

seq1  ACTGTGAAGATATTAGAAAAATTTCCAGGAAAAAAATATAATTAATTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAAGATATTAGAAAAATTTCCAGGAAAAAAATATAATTAATTCTC  100

seq1  CCTCTCCCTCCCCTTATCCCCTTCCCTCCTCCCCATCTTCCTCCCCCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCTCCCCTTATCCCCTTCCCTCCTCCCCATCTTCCTCCCCCTCC  150

seq1  ATCCTCTTTTCTCTATCTCTCTTTCTCTCTCTCTCCCTCTCTCGATGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTTTTCTCTATCTCTCTTTCTCTCTCTCTCCCTCTCTCGATGAGA  200

seq1  TGATGCTTGCTCATAAACTCAAGTCTTGGAGGATTGTGGAGTGTGTGTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCTTGCTCATAAACTCAAGTCTTGGAGGATTGTGGAGTGTGTGTGT  250

seq1  GTGTGTGTGTGTGTGTG  267
      |||||||||||||||||
seq2  GTGTGTGTGTGTGTGTG  267

seq1: chr6_133037452_133038500
seq2: B6Ng01-024D16.g_68_1118 (reverse)

seq1  TATATCTGCTTATGACTAACATGTTTAAGAAAATGATGAGCAAATATGGC  50
      ||||| ||||||||||||||||| ||||||||||| || |||||||||||
seq2  TATATTTGCTTATGACTAACATG-TTAAGAAAATG-TGGGCAAATATGGC  48

seq1  AGCAATGTCAATTAAACTAGCTTTTTAAGGTTTCAACTTCTGGTCAAGAA  100
      ||| ||| ||| ||||||||| |||||||||||| ||||||||||||| |
seq2  AGC-ATGGCAA-TAAACTAGC-TTTTAAGGTTTC-ACTTCTGGTCAAGGA  94

seq1  AAAGAGTGTTTTTAGTGTAGCTATCTTGAGAAAATAGAAGATGCTG-AGT  149
      || |||| |||||||||||||   |||||||||||||||||||||| |||
seq2  AACGAGTTTTTTTAGTGTAGCATACTTGAGAAAATAGAAGATGCTGAAGT  144

seq1  CATGTAG-CAAGCCAGATGCTGCAAT-GATTGGTCACTGTTCAATATTTT  197
      ||||||| |||||||||||||||||| |||||||||||||||||||||||
seq2  CATGTAGCCAAGCCAGATGCTGCAATGGATTGGTCACTGTTCAATATTTT  194

seq1  TTCATAATTCTTTTACTTTTTCTAGTTATTAGAGCTGGGTA-GGTGGCTA  246
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTCATAATTCTTTTACTTTTTCTAGTTATTAGAGCTGGGTAGGGTGGCTA  244

seq1  ATA-CCAATAAACTTGCAATTAGTGTCCAGATCACAGAGATTCCGGAGAG  295
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCCAATAAACTTGCAATTAGTGTCCAGATCACAGAGATTCCGGAGAG  294

seq1  AGCCAGAGCA-GGGAAGATCTAAAACACTGACGACATCTTTCTTTTTCTG  344
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGAGCAGGGGAAGATCTAAAACACTGACGACATCTTTCTTTTTCTG  344

seq1  -ACCCAGT-CCACCCATGATATTCACCCAGGCTAAAAATGCACTGCCTAA  392
       ||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGTCCCACCCATGATATTCACCCAGGCTAAAAATGCACTGCCTAA  394

seq1  ATTTCCTATTATTAATTTCACACTTAAAATAAATGTTAATGTGAAATATA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTATTATTAATTTCACACTTAAAATAAATGTTAATGTGAAATATA  444

seq1  GGATAGGATTCATTGCCACTGGAAGGATGATTTAGTTTCTAGTTAAGTAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGATTCATTGCCACTGGAAGGATGATTTAGTTTCTAGTTAAGTAA  494

seq1  TGAAGATGTGTTAATCAATCTTCTAAAATGCTCTGTGTATAAAATTCTTG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGTGTTAATCAATCTTCTAAAATGCTCTGTGTATAAAATTCTTG  544

seq1  AACTTTCAAAACATTTACTGCCAAAAACCCATATATACAGTACCAAGAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTCAAAACATTTACTGCCAAAAACCCATATATACAGTACCAAGAAA  594

seq1  ATACAAATCACTAATGTCCACAGTGTTTTGGGTGAAAATTATATATTTTC  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATCACTAATGTCCACAGTGTTTTGGGTGAAAATTATATATTTTC  644

seq1  CAAGGCAGCTAGTTTAATCTTTCTCCACATACTACACACCTTATCCAGAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAGCTAGTTTAATCTTTCTCCACATACTACACACCTTATCCAGAG  694

seq1  CACCCTATTGTTTTTGCTTTGTTCTTTTGTTTGTTTGTTTGTTTTTTAGT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTATTGTTTTTGCTTTGTTCTTTTGTTTGTTTGTTTGTTTTTTAGT  744

seq1  TTTGCTGTTGTTGATGATGAGGAAGAAACACTGAATTCTCAGTTTTATCA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGTTGTTGATGATGAGGAAGAAACACTGAATTCTCAGTTTTATCA  794

seq1  TCAAAATCAAGATATAATTATTTGTATTGGCTTTGATAGTTTTTTTTTAT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATCAAGATATAATTATTTGTATTGGCTTTGATAGTTTTTTTTTAT  844

seq1  ACAAATTTAGTCTCAATATTTGATTTCTGGACAAATAATTTTGGGGAATT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATTTAGTCTCAATATTTGATTTCTGGACAAATAATTTTGGGGAATT  894

seq1  GTAATTAATACCTGGCAACAAAATCTAGACTGACATATAAAATAAAAACA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATTAATACCTGGCAACAAAATCTAGACTGACATATAAAATAAAAACA  944

seq1  ACATTAAACACATCAAATTTAAGTTTGCACAGGGACCAATGGATGCTTCC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAAACACATCAAATTTAAGTTTGCACAGGGACCAATGGATGCTTCC  994

seq1  CATTGTAAGCTCTCTGTTACCTAAAATTCTTGTAGACATTTTTGTTCCTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTAAGCTCTCTGTTACCTAAAATTCTTGTAGACATTTTTGTTCCTC  1044

seq1  TGAATTC  1049
      |||||||
seq2  TGAATTC  1051