BAC Information

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BAC

Clone NameB6Ng01-024D19
Chromosome6 (Build37)
Map Location 145,635,497 - 145,810,472
singlet/doubletdoublet
Overlap geneRassf8
Upstream gene4933425H06Rik, EG665149, Bcat1, Lrmp, Casc1, Lyrm5, Kras, LOC100039495, LOC100042866, LOC546917, 1700073E17Rik, Ifltd1, LOC100042879, Tuba3b
Downstream geneBhlhb3, Sspn, Itpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024D19.bB6Ng01-024D19.g
ACCDH855936DH855937
length1,1101,096
definitionDH855936|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D19, 5' end.DH855937|Mus musculus domesticus DNA, BAC clone: B6Ng01-024D19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(145,635,497 - 145,636,622)(145,809,368 - 145,810,472)
sequence
gaattccacaggacactagtgaaagagagtatatagggagagtggaaacc
ctgagagactcccagctgaccgtgctccaggcccaggttcagctgggagt
ccagttgctgggagtgggttcctcactggtgctgggcaggtcatttccta
ggaatctcatgcccattgtctcaagtccactccaccaaactgcaggttga
cttctccagaaagcagaagctaatctaagattgctgtgcacgcatgctac
agagagtctgtgggggtttgagaaaattgtgcagggacctcctaggcttg
gcgttgccgctaaagctagtgggcgtggcctctaaggctagcaggcgtgg
cctctaaggctagtgggtgagcggctttctactgagcatctcactggtcc
tcttcctttgttttgtttgctttgttttgttttaaatcttccaattcctt
ccaaagacactgtaacctaacttcaaagtcttcctttgaagttagaaatt
ttgtagcttgggcaaggttaccactctctcatctttgtatgtcctagcat
tgaatgaacattttcctagcaagcacttatgggagagagttccttctgtc
ttaaaattgtagttttatctaagttagatacctctgccttcctatgacct
tttaaaaattattttctatagtttctgtgcatcaatttcaactgcctccc
tgtgttcttcgtacattctgattattgtctttttcttttctctcctccct
ccctccctcctctgcctcttctctctctctctgtctctctgtctctctgt
ctctgtctctctctctctcacacacatgtttttccccccatgttcttcta
tcactatgtacaaagagatatccttacagtgacggtttcacacacacaca
cacatatcattcggtttgtctttctcctcgtgtcccctctttcccttctt
ccaaaaataccacccccccccaaattggtaccatgcagaacaattccact
tcacagattctttgacttgattaatccaaaagtgataagctgcacacagt
agggaggcttagctccagcaggaggcagttgctaggcagagaggcatgaa
aaagaacaac
gaattcttagatgacagaagtggagagaggggcttgcagtcccttgtgat
gggaagtgctgtgaacatagagaaggccttgccaggcctctcaaggctgt
atgtatttttcgggagaccaaaaccagataccagaagaaagtttttcaaa
atcaggcataaaccaagaccttgtctagatatttttagtttgttgccaag
gtagcactgagaaatctcacttgaatgttacataaggggtgagacacaat
agtgaagaaagttacctggggctgtgagtgttcgggtcgtttgctgctgc
tgttgctactgtttgcctcaaacgctgtgtttaaacaacgttaaaacttc
ttagcctaccaaggcggctgtatgtacatagctgttgatactcccaatta
atgatgtctgacatgctatttttgtagggagaagatacctgctaatgata
tttttagttaaaatatcttttggggcggacttggtgaaatgtttgcactt
tggttacatgcttttactgcttggtgcaagcttacgctgtcttaaattat
taaacaaataaaaatattatctgcaagaaaaaccagctggtttagacaag
tttagtatgtaaagataagctagaaactatctttatattctagtattttc
agcactccatattacctaaatattgccacactatttttgtgatttaaaag
ttcttactaaggaataaaatgtttatatatgatatgcgatggtctaataa
ttaaacgatactgggtacccaatgagttttcagagactgctgtgtacaag
gacctgagctcatctgcgtacttggacgctttccgtttggttttggtttt
aatatatttaatcactggtttctccaggagactcctgtttgggccttggg
tccccacttctcccagtctatcttatgaaaaccacagagaatatctagca
ctcgcttgaaagtcgtcattgtaaacccagttggctatggttttttatga
ttaactggtttgggtctgtgacccaaatccctcctttgtgggggtctgct
gttttcttctgcctagtcatgaacaccactagggggaggagatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_145635497_145636622
seq2: B6Ng01-024D19.b_44_1153

seq1  GAATTCCACAGGACACTAGTGAAAGAGAGTATATAGGGAGAGTGGAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGGACACTAGTGAAAGAGAGTATATAGGGAGAGTGGAAACC  50

seq1  CTGAGAGACTCCCAGCTGACCGTGCTCCAGGCCCAGGTTCAGCTGGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGACTCCCAGCTGACCGTGCTCCAGGCCCAGGTTCAGCTGGGAGT  100

seq1  CCAGTTGCTGGGAGTGGGTTCCTCACTGGTGCTGGGCAGGTCATTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCTGGGAGTGGGTTCCTCACTGGTGCTGGGCAGGTCATTTCCTA  150

seq1  GGAATCTCATGCCCATTGTCTCAAGTCCACTCCACCAAACTGCAGGTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCTCATGCCCATTGTCTCAAGTCCACTCCACCAAACTGCAGGTTGA  200

seq1  CTTCTCCAGAAAGCAGAAGCTAATCTAAGATTGCTGTGCACGCATGCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCCAGAAAGCAGAAGCTAATCTAAGATTGCTGTGCACGCATGCTAC  250

seq1  AGAGAGTCTGTGGGGGTTTGAGAAAATTGTGCAGGGACCTCCTAGGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCTGTGGGGGTTTGAGAAAATTGTGCAGGGACCTCCTAGGCTTG  300

seq1  GCGTTGCCGCTAAAGCTAGTGGGCGTGGCCTCTAAGGCTAGCAGGCGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTTGCCGCTAAAGCTAGTGGGCGTGGCCTCTAAGGCTAGCAGGCGTGG  350

seq1  CCTCTAAGGCTAGTGGGTGAGCGGCTTTCTACTGAGCATCTCACTGGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAAGGCTAGTGGGTGAGCGGCTTTCTACTGAGCATCTCACTGGTCC  400

seq1  TCTTCCTTTGTTTTGTTTGCTTTGTTTTGTTTTAAATCTTCCAATTCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTTTGTTTTGTTTGCTTTGTTTTGTTTTAAATCTTCCAATTCCTT  450

seq1  CCAAAGACACTGTAACCTAACTTCAAAGTCTTCCTTTGAAGTTAGAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGACACTGTAACCTAACTTCAAAGTCTTCCTTTGAAGTTAGAAATT  500

seq1  TTGTAGCTTGGGCAAGGTTACCACTCTCTCATCTTTGTATGTCCTAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGCTTGGGCAAGGTTACCACTCTCTCATCTTTGTATGTCCTAGCAT  550

seq1  TGAATGAACATTTTCCTAGCAAGCACTTATGGGAGAGAGTTCCTTCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGAACATTTTCCTAGCAAGCACTTATGGGAGAGAGTTCCTTCTGTC  600

seq1  TTAAAATTGTAGTTTTATCTAAGTTAGATACCTCTGCCTTCCTATGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATTGTAGTTTTATCTAAGTTAGATACCTCTGCCTTCCTATGACCT  650

seq1  TTTAAAAATTATTTTCTATAGTTTCTGTGCATCAATTTCAACTGCCTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAATTATTTTCTATAGTTTCTGTGCATCAATTTCAACTGCCTCCC  700

seq1  TGTGTTCTTCGTACATTCTGATTATTGTCTTTTTCTTTTCTCTCCTCCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCTTCGTACATTCTGATTATTGTCTTTTTCTTTTCTCTCCTCCCT  750

seq1  CCCTCCCTCCTCTGCCTCTTCTCTCTCTCTCTGTCTCTCTGTCTCTCTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCTCCTCTGCCTCTTCTCTCTCTCTCTGTCTCTCTGTCTCTCTGT  800

seq1  CTCTGTCTCTCTCTCTCTCACACACATGTTTTTCCCCCCATGTTCTTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTCTCTCTCTCTCACACACATGTTTTTCCCCCCATGTTCTTCTA  850

seq1  TCACTATGTACAAAGAGATATCCTTACAGTGACGGTTTCACACACACACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTATGTACAAAGAGATATCCTTACAGTGACGGTTTCACACACACACA  900

seq1  CACATATCATTCGGCTTTGTTCTTTTCTCCTCGTGTCCCCTCTTTCCCTT  950
      |||||||||||||| |||||   |||||||||||||||||||||||||||
seq2  CACATATCATTCGG-TTTGT--CTTTCTCCTCGTGTCCCCTCTTTCCCTT  947

seq1  CCTTCCAGAAAAATACCACCCCCCCCCCAAAATATGTAACCATGCAAGAC  1000
       |||||  |||||||||||||||||||  |||| ||  ||||||||  ||
seq2  -CTTCC--AAAAATACCACCCCCCCCC--AAAT-TGGTACCATGCAGAAC  991

seq1  CATTTTCTACTTCACAGATTCATTTGACTTGATTCAATCCAACAGTTGAG  1050
       |  ||| ||||||||||||| |||||||||||| ||||||| || ||| 
seq2  AA--TTCCACTTCACAGATTC-TTTGACTTGATT-AATCCAAAAG-TGAT  1036

seq1  TAGCTGCACACAGTAAGGCAGGCTTAGCTCCAGCAAGAGGCAAGTGGCTA  1100
       ||||||||||||| ||| |||||||||||||||| ||||| ||| ||||
seq2  AAGCTGCACACAGT-AGGGAGGCTTAGCTCCAGCAGGAGGC-AGTTGCTA  1084

seq1  GGCAGAGGCACAGGACAGAGAACAAC  1126
      |||||||   || || | ||||||||
seq2  GGCAGAGAGGCATGAAAAAGAACAAC  1110

seq1: chr6_145809368_145810472
seq2: B6Ng01-024D19.g_69_1164 (reverse)

seq1  AACATCT-CTCCCCCTAGTGTGTTTCAGACCTGGGCAGAAGAGAAACAGC  49
      ||||||| ||||||||||||   ||||   || ||||||||| |||||||
seq2  AACATCTCCTCCCCCTAGTGGTGTTCATGACTAGGCAGAAGA-AAACAGC  49

seq1  AGA-CCACACAAGAGAGGGTATCTGGGGTCACAGACCCAAACCAGGTAAA  98
      ||| || |||||  ||||| || | ||||||||||||||||||| || ||
seq2  AGACCCCCACAAAGGAGGG-AT-TTGGGTCACAGACCCAAACCA-GTTAA  96

seq1  TCATAAAAAAACATTAGCAAACTGGGTCTACAATGAACGACCTTCCAGCG  148
      |||||||||| || |||| |||||||| ||||||| ||||| ||| ||||
seq2  TCATAAAAAACCA-TAGCCAACTGGGTTTACAATG-ACGACTTTCAAGCG  144

seq1  AGTGCTAGACTATTCCTTCTGTGGTTTTCATTAAGATAGACTGGGAGAAG  198
      ||||||||| |||||  ||||||||||||| |||||||||||||||||||
seq2  AGTGCTAGA-TATTC--TCTGTGGTTTTCA-TAAGATAGACTGGGAGAAG  190

seq1  TGGGGACCCAAGGCCCAAACCAGGAGTCTCCCTGGAGAAACCAGTGATTA  248
      ||||||||||||||||||| ||||||||| ||||||||||||||||||||
seq2  TGGGGACCCAAGGCCCAAA-CAGGAGTCT-CCTGGAGAAACCAGTGATTA  238

seq1  AATATATTAAAACCAAAACCAAACGGAAAGCGTCCAAGTACGCAGATGAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAAAACCAAAACCAAACGGAAAGCGTCCAAGTACGCAGATGAG  288

seq1  CTCAGGTCCTTGTACACAGCAGTCTCTGAAAACTCATTGGGTACCCAGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGTCCTTGTACACAGCAGTCTCTGAAAACTCATTGGGTACCCAGTA  338

seq1  TCGTTTAATTATTAGACCATCGCATATCATATATAAACATTTTATTCCTT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTAATTATTAGACCATCGCATATCATATATAAACATTTTATTCCTT  388

seq1  AGTAAGAACTTTTAAATCAC-AAAATAGTGTGGCAATATTTAGGTAATAT  447
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTAAGAACTTTTAAATCACAAAAATAGTGTGGCAATATTTAGGTAATAT  438

seq1  GGAGTGCTGAAAATACTAGAATATAAAGATAGTTTCTAGCTTATCTTTAC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCTGAAAATACTAGAATATAAAGATAGTTTCTAGCTTATCTTTAC  488

seq1  ATACTAAACTTGTCTAAACCAGCTGGTTTTTCTTGCAGATAATATTTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAACTTGTCTAAACCAGCTGGTTTTTCTTGCAGATAATATTTTTA  538

seq1  TTTGTTTAATAATTTAAGACAGCGTAAGCTTGCACCAAGCAGTAAAAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTAATAATTTAAGACAGCGTAAGCTTGCACCAAGCAGTAAAAGCA  588

seq1  TGTAACCAAAGTGCAAACATTTCACCAAGTCCGCCCCAAAAGATATTTTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACCAAAGTGCAAACATTTCACCAAGTCCGCCCCAAAAGATATTTTA  638

seq1  ACTAAAAATATCATTAGCAGGTATCTTCTCCCTACAAAAATAGCATGTCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAATATCATTAGCAGGTATCTTCTCCCTACAAAAATAGCATGTCA  688

seq1  GACATCATTAATTGGGAGTATCAACAGCTATGTACATACAGCCGCCTTGG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATCATTAATTGGGAGTATCAACAGCTATGTACATACAGCCGCCTTGG  738

seq1  TAGGCTAAGAAGTTTTAACGTTGTTTAAACACAGCGTTTGAGGCAAACAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAAGAAGTTTTAACGTTGTTTAAACACAGCGTTTGAGGCAAACAG  788

seq1  TAGCAACAGCAGCAGCAAACGACCCGAACACTCACAGCCCCAGGTAACTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAACAGCAGCAGCAAACGACCCGAACACTCACAGCCCCAGGTAACTT  838

seq1  TCTTCACTATTGTGTCTCACCCCTTATGTAACATTCAAGTGAGATTTCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACTATTGTGTCTCACCCCTTATGTAACATTCAAGTGAGATTTCTC  888

seq1  AGTGCTACCTTGGCAACAAACTAAAAATATCTAGACAAGGTCTTGGTTTA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTACCTTGGCAACAAACTAAAAATATCTAGACAAGGTCTTGGTTTA  938

seq1  TGCCTGATTTTGAAAAACTTTCTTCTGGTATCTGGTTTTGGTCTCCCGAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGATTTTGAAAAACTTTCTTCTGGTATCTGGTTTTGGTCTCCCGAA  988

seq1  AAATACATACAGCCTTGAGAGGCCTGGCAAGGCCTTCTCTATGTTCACAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATACAGCCTTGAGAGGCCTGGCAAGGCCTTCTCTATGTTCACAG  1038

seq1  CACTTCCCATCACAAGGGACTGCAAGCCCCTCTCTCCACTTCTGTCATCT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCATCACAAGGGACTGCAAGCCCCTCTCTCCACTTCTGTCATCT  1088

seq1  AAGAATTC  1105
      ||||||||
seq2  AAGAATTC  1096