BAC Information

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BAC

Clone NameB6Ng01-024O16
Chromosome6 (Build37)
Map Location 22,696,501 - 22,870,600
singlet/doubletdoublet
Overlap genePtprz1
Upstream geneTspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948, LOC100040959, LOC668018, LOC668022
Downstream geneAass, EG668044, EG546894, EG668053, EG384356, Fezf1, Cadps2, Rnf133, Rnf148
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-024O16.bB6Ng01-024O16.g
ACCDH856410DH856411
length762953
definitionDH856410|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O16, 5' end.DH856411|Mus musculus domesticus DNA, BAC clone: B6Ng01-024O16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,870,065 - 22,870,600)(22,696,501 - 22,697,101)
sequence
gaattctttgtttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatatattggatattagtc
ccctatatgatttaagataggtaaagatcctttcccaatctgtttgtggt
ctttttgtcttattggcagtgtcttttgccttgcagaagccttgcaattt
tatgaggtcccatttgttgattcttaatcttacagcacaagccattgctg
ttctattcaggaatttttcccctgtaaccatatcttggaggtttttccct
actttctcctctataagtttcagtgtctctggttttatgtggagttcctt
aatccacttagatttgaccttagtacaaggagataggaatggatcaattc
gcattcttctatattataactgccagttgtgccaacaccatttgttgaaa
atgctgtcttttttccactggatggtttttgctcccttgtcaaagatcaa
gtgaccataggtgtgtgggttcatttctgggtcttcaattctattccctt
ggtctacttgtctgtcgctataccagtactatgcagtttttttcacaatt
gctttgcctcaagttttaaaagcccccctttaccaaataaaaatgaggtg
ctcattccctactaatgcatcctaaatactttaatcataaaatcactcca
agtgttctctaataaaggtctcatttatgtcttgatcaatgttatcatcc
tcctcctattac
gaattcccacacagttctttgcaatcatgttcaggcttttagtgtttttt
tttattatcattataatttcaaattatgagcctgctttgcctgttaaaat
atctctcaccccctcatcaaagaatcttctctttgcagaagatggagacc
acgaaaaaaaaaaaacataactggccgaaatacagagaaaaactcattgt
agggtgcccatccccaatgcatccactatatgtatataatttcaggactt
actagttggtatggatatctaatcaaggggctcattcctggggaagacta
attctcctcttcatagttcttggttgcctatagttcttgtctagaggcag
agcccatgaaacttccttcttccacattagctgggatagacactatgagt
acagcaaaccacagttaggagtcattttattgttgagttcctttagcaca
acattaatatttagatttcccctatatctataacctatcttgtctcaggt
tatgagccacctatgatgtgtcaggcatgagttctatctcatgaagtggg
ctttcaatccagccagagagtgcttggttgttactatgacttttgtacca
ctattgcattggtctattaggtagatcagttacctttgcatagcaaaggt
tttgtagctgtgttgatgcttagatctctcctctggtagtaaatagagat
ccatgaacactactcagcagggggggaaagctctagttatgtaccagctc
aacttctccctgttgactgagatatgtaggtgttgtctttcagtaaaaga
gccctactatgagttttgtggagaataacaatagccttactaatggcttt
ggttgtttgcatatttctacagagcccacactggccaacaactcaattag
atataatccattcctgccactaaagaatcacctttgtggggagatggagt
cta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_22870065_22870600
seq2: B6Ng01-024O16.b_268_804 (reverse)

seq1  GTAATAGGAGGCAGATGATAACATTGATCAAGACATAACTGAGACCTTTC  50
      |||||||||||  ||||||||||||||||||||||||| |||||||||| 
seq2  GTAATAGGAGGAGGATGATAACATTGATCAAGACATAAATGAGACCTTTA  50

seq1  TTAGAGTACACTTGGAGTGATTTTATGATTAAAGTATTTAGGATGCATTA  100
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGAACACTTGGAGTGATTTTATGATTAAAGTATTTAGGATGCATTA  100

seq1  GTAGGGAATGAGCACCTCATTTTTATTTGGT-AAGGGGGGCTTTTAAAAC  149
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTAGGGAATGAGCACCTCATTTTTATTTGGTAAAGGGGGGCTTTTAAAAC  150

seq1  TTGAGGCAAAGCAATTGTGATAAAAACTGCATAGTACTGGTATAGCGACA  199
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTGAGGCAAAGCAATTGTGAAAAAAACTGCATAGTACTGGTATAGCGACA  200

seq1  GACAAGTAGACCAAGGGAATAGAATTGAAGACCCAGAAATGAACCCACAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAGTAGACCAAGGGAATAGAATTGAAGACCCAGAAATGAACCCACAC  250

seq1  ACCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATCCAGTGGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATGGTCACTTGATCTTTGACAAGGGAGCAAAAACCATCCAGTGGAA  300

seq1  AAAAGACAGCATTTTCAACAAATGGTGTTGGCACAACTGGCAGTTATAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGACAGCATTTTCAACAAATGGTGTTGGCACAACTGGCAGTTATAAT  350

seq1  ATAGAAGAATGCGAATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAAGAATGCGAATTGATCCATTCCTATCTCCTTGTACTAAGGTCAAA  400

seq1  TCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAACTTAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGGATTAAGGAACTCCACATAAAACCAGAGACACTGAAACTTAT  450

seq1  AGAGGAGAAAGTAGGGAAAAACCTCCAAGATATGGTTACAGGGGAAAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGAAAGTAGGGAAAAACCTCCAAGATATGGTTACAGGGGAAAAAT  500

seq1  TCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATT  536
      |||||||||||||||||||||||||||||||||||||
seq2  TCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATT  537

seq1: chr6_22696501_22697101
seq2: B6Ng01-024O16.g_71_671

seq1  GAATTCCCACACAGTTCTTTGCAATCATGTTCAGGCTTTTAGTGTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACACAGTTCTTTGCAATCATGTTCAGGCTTTTAGTGTTTTTT  50

seq1  TTTATTATCATTATAATTTCAAATTATGAGCCTGCTTTGCCTGTTAAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATCATTATAATTTCAAATTATGAGCCTGCTTTGCCTGTTAAAAT  100

seq1  ATCTCTCACCCCCTCATCAAAGAATCTTCTCTTTGCAGAAGATGGAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTCACCCCCTCATCAAAGAATCTTCTCTTTGCAGAAGATGGAGACC  150

seq1  ACGAAAAAAAAAAAACATAACTGGCCGAAATACAGAGAAAAACTCATTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAAAAAAAAAAACATAACTGGCCGAAATACAGAGAAAAACTCATTGT  200

seq1  AGGGTGCCCATCCCCAATGCATCCACTATATGTATATAATTTCAGGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGCCCATCCCCAATGCATCCACTATATGTATATAATTTCAGGACTT  250

seq1  ACTAGTTGGTATGGATATCTAATCAAGGGGCTCATTCCTGGGGAAGACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTGGTATGGATATCTAATCAAGGGGCTCATTCCTGGGGAAGACTA  300

seq1  ATTCTCCTCTTCATAGTTCTTGGTTGCCTATAGTTCTTGTCTAGAGGCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTCTTCATAGTTCTTGGTTGCCTATAGTTCTTGTCTAGAGGCAG  350

seq1  AGCCCATGAAACTTCCTTCTTCCACATTAGCTGGGATAGACACTATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCATGAAACTTCCTTCTTCCACATTAGCTGGGATAGACACTATGAGT  400

seq1  ACAGCAAACCACAGTTAGGAGTCATTTTATTGTTGAGTTCCTTTAGCACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAACCACAGTTAGGAGTCATTTTATTGTTGAGTTCCTTTAGCACA  450

seq1  ACATTAATATTTAGATTTCCCCTATATCTATAACCTATCTTGTCTCAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAATATTTAGATTTCCCCTATATCTATAACCTATCTTGTCTCAGGT  500

seq1  TATGAGCCACCTATGATGTGTCAGGCATGAGTTCTATCTCATGAAGTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGCCACCTATGATGTGTCAGGCATGAGTTCTATCTCATGAAGTGGG  550

seq1  CTTTCAATCCAGCCAGAGAGTGCTTGGTTGTTACTATGACTTTTGTACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAATCCAGCCAGAGAGTGCTTGGTTGTTACTATGACTTTTGTACCA  600

seq1  C  601
      |
seq2  C  601