BAC Information

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BAC

Clone NameB6Ng01-028O01
Chromosome6 (Build37)
Map Location 36,209,359 - 36,210,377
singlet/doubletsinglet
Overlap gene9330158H04Rik
Upstream gene1810058I24Rik, Slc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327
Downstream geneChrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028O01.g
ACCDH859236
length1,019
definitionDH859236|Mus musculus domesticus DNA, BAC clone: B6Ng01-028O01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatgaggcatctacagttagaaaatacctaataaaaataata
aataaaaaagaattcaccatgaggggaatatttcattctcaaaatagttt
ttttcttcgtgttatcagttgttctgaatgttagattctctccccccacc
ccatggtatcaaaaggtaccaaagtatatgattgtgagtggtaaagtaga
gaaccaaatccaggtatttgcagtttttctattttcatctgtgtatgaat
ttttaatttaaatgcacgatttaaagcatcaatgaaaacttattgtttca
gctgacatgtttcaacagttcaaccttataatgatcactttttaaaaagt
attaaaattttctgggaaaatgactgcatttagatattttacaaattagt
gatttcttatgggtagctactaaatggtgtttgtaatgtctttatcatat
ggccgacttcatcctttcatgatggtgctgtaactaagctatcctccatg
tgagaacaggcactaaaaagtgtctgtcttctgtgctgttcctcttacat
ttgctattcaaatgtattagactataagaaaaagaaaaagaaaacccaaa
acaaaataaaaaccggtgttctgtagtttgaggtctatacttactgcttt
atgtgcatgcattcaggtattcttttacaagttagatatgtcacacgtta
ttttattccagttttattcctctgttgcttttttactgtttgcatttgtg
tttggaacatatctagaaaataatcattcagaataataccatggaatttt
ccctcattttttttcccaaaaatttttacagtttcagggcttaaggctaa
gcctttagacagttttgaatttactcactgtggcacaagataaaggatac
tttctttgcatatggtcatcagttttttcacataattataataggactat
ctctttttcagggtatgtttctaggctccttattggaaatcgcgggtctg
aatggttttaatttatttc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_36209359_36210377
seq2: B6Ng01-028O01.g_65_1083 (reverse)

seq1  GAAAT-AACTAAAACCATTCAGATCCACTGATTTCCAATAAAGATGCCTA  49
      ||||| || |||||||||||||| || | |||||||||||| || |||||
seq2  GAAATAAATTAAAACCATTCAGACCCGC-GATTTCCAATAAGGA-GCCTA  48

seq1  G-AACATACCCTGGAAAAAGAGATAGTCCTATTATAAATTATGTGAAAAA  98
      | |||||||||| |||||||||||||||||||||| ||||||||||||||
seq2  GAAACATACCCT-GAAAAAGAGATAGTCCTATTAT-AATTATGTGAAAAA  96

seq1  ACTTGATGACCATATGCAAAGAAAGTATCC-TTATCTTGTGCCACAGTGA  147
      || ||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AC-TGATGACCATATGCAAAGAAAGTATCCTTTATCTTGTGCCACAGTGA  145

seq1  GTAAATTCAAAACTGTCTAAAGGCTTAGCCTTAAGCCCTGAAACTGT-AA  196
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTAAATTCAAAACTGTCTAAAGGCTTAGCCTTAAGCCCTGAAACTGTAAA  195

seq1  AACTTTTGGGAAAAAAAATGAGGGAAAATTCCATGGTATTATTCTGAATG  246
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTTGGGAAAAAAAATGAGGGAAAATTCCATGGTATTATTCTGAATG  245

seq1  ATTATTTTCTAGATATGTTCCAAACACAAATGCAAACAGT-AAAAAGCAA  295
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ATTATTTTCTAGATATGTTCCAAACACAAATGCAAACAGTAAAAAAGCAA  295

seq1  CAGAGGAATAAAACTGGAATAAAATAACGTGTGACATATCTAACTTGTAA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGAATAAAACTGGAATAAAATAACGTGTGACATATCTAACTTGTAA  345

seq1  AAGAATACCTGAATGCATGCACATAAAGCAGTAAGTATAGACCTCAAACT  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATACCTGAATGCATGCACATAAAGCAGTAAGTATAGACCTCAAACT  395

seq1  ACAGAACACCGGTTTTTATTTTGTTTTGGGTTTTCTTTTTCTTTTTCTTA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACACCGGTTTTTATTTTGTTTTGGGTTTTCTTTTTCTTTTTCTTA  445

seq1  TAGTCTAATACATTTGAATAGCAAATGTAAGAGGAACAGCACAGAAGACA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAATACATTTGAATAGCAAATGTAAGAGGAACAGCACAGAAGACA  495

seq1  GACACTTTTTAGTGCCTGTTCTCACATGGAGGATAGCTTAGTTACAGCAC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACTTTTTAGTGCCTGTTCTCACATGGAGGATAGCTTAGTTACAGCAC  545

seq1  CATCATGAAAGGATGAAGTCGGCCATATGATAAAGACATTACAAACACCA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGAAAGGATGAAGTCGGCCATATGATAAAGACATTACAAACACCA  595

seq1  TTTAGTAGCTACCCATAAGAAATCACTAATTTGTAAAATATCTAAATGCA  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTAGCTACCCATAAGAAATCACTAATTTGTAAAATATCTAAATGCA  645

seq1  GTCATTTTCCCAGAAAATTTTAATACTTTTTAAAAAGTGATCATTATAAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTTCCCAGAAAATTTTAATACTTTTTAAAAAGTGATCATTATAAG  695

seq1  GTTGAACTGTTGAAACATGTCAGCTGAAACAATAAGTTTTCATTGATGCT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAACTGTTGAAACATGTCAGCTGAAACAATAAGTTTTCATTGATGCT  745

seq1  TTAAATCGTGCATTTAAATTAAAAATTCATACACAGATGAAAATAGAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATCGTGCATTTAAATTAAAAATTCATACACAGATGAAAATAGAAAA  795

seq1  ACTGCAAATACCTGGATTTGGTTCTCTACTTTACCACTCACAATCATATA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAAATACCTGGATTTGGTTCTCTACTTTACCACTCACAATCATATA  845

seq1  CTTTGGTACCTTTTGATACCATGGGGTGGGGGGAGAGAATCTAACATTCA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTACCTTTTGATACCATGGGGTGGGGGGAGAGAATCTAACATTCA  895

seq1  GAACAACTGATAACACGAAGAAAAAAACTATTTTGAGAATGAAATATTCC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAACTGATAACACGAAGAAAAAAACTATTTTGAGAATGAAATATTCC  945

seq1  CCTCATGGTGAATTCTTTTTTATTTATTATTTTTATTAGGTATTTTCTAA  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGGTGAATTCTTTTTTATTTATTATTTTTATTAGGTATTTTCTAA  995

seq1  CTGTAGATGCCTCATAGTGAATTC  1019
      ||||||||||||||||||||||||
seq2  CTGTAGATGCCTCATAGTGAATTC  1019