BAC Information

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BAC

Clone NameB6Ng01-028P17
Chromosome6 (Build37)
Map Location 141,662,663 - 141,663,796
singlet/doubletsinglet
Overlap geneEG435927
Upstream geneEG664868, LOC664875, Pde3a, Slco1c1, Slco1b2
Downstream geneSlco1a4, LOC100042750, EG664913, Slco1a1, EG625716, Slco1a6, Slco1a5, Iapp, BC027061, Recql, Golt1b, B230216G23Rik, Gys2, Ldhb, Kcnj8, Abcc9, 5330439B14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028P17.bB6Ng01-028P17.g
ACCDH859311DH859312
length1,1261,144
definitionDH859311|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P17, 5' end.DH859312|Mus musculus domesticus DNA, BAC clone: B6Ng01-028P17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggacagccggagctacacagaaaaaccctgtctcaaaacaaa
caaacaaacaaacaaaccaaaacaaaaacaaacaaacaaacaaacaacaa
aaaaaaaccttctgaaaatattcttataaattaggaatatggaagcccta
ttaaaatgtgtaagaaaagcataatatattcaactattggtatttcattt
ggcagcagcaattccatgaaagatttcaagaaaatcgaacagactagaag
agcaatgatagcatgcaaatagtagcattacatcatctaacatctatatc
ataatcatcaaattcagcacaaataaggaaagaaataaaaaaaaaaagta
agtgcagtacatcatgaaatcacacattagggttcagtgtgtaaagtttc
ttgccacttagcttgacaactgtgttcaatacctggaacccacgtaatgg
atagatacaaaattttatgagatgtcttgtcattttaacatgcatgtcat
tgtatgcaaacacacacatacacacacacatgtgtacatacacacactca
cataagaaacatttatgctaatcacacaaagtattttaaataatcataat
ttaagcaccaataagacatgtttttaacacccagtggaaacattaggaag
taagatagttgtgaatgtgagtgagggatagaattgtgaacagccattca
gtagatctgaaaacatcactcagagtatgtttagagattataacaggaga
tttcagttgttcatatgcccttcacctgtgacccacctcctctgtgagga
aaagtcatccttatcaactgagcatgcagctttgcaactgaggcaccggg
aggagggagggaggaaggagacaccacttagcctcctcagctgaatctgg
ctggaaggtgatggggtgtcagatgtcacagacaaacttccctcacttgt
agcaataagttttaagccttattcactagcaatatttgattccttttttt
tgccatgaacctattgacccaaacaggcatataccacatttctgtgatag
gaattagaatataacattcttagactggaaatgattattaagtcatgctt
atttagtgagctgtagttgggttgaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ctcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggagatcagtctggcggttcctca
gaaaactggatatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaggaacccagat
gcccctcaacagaggaatggatacagaagatgtggtacatctacacaatg
gattactactcagctattaaaaagaatgaatttatgaaattcctggccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taagatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtgaacactatgcccctccttagaagtgggag
caaaacacccttggaaggagttacagagacaaagtttggagttgagataa
aaggatggaccatgtagacactaccatatccggggatccatcccataatc
agcttccaaatgctgacaccattgcatacactagcaagattatgctgaaa
ggaccctgatatagctgtctcttgtcagagtatgcctgggcctagcaaac
atagaagtggatgctcacagtcggctattggatggatcacatggccccca
atgaagagctagagaagtaccaaagaagctaagggatctgcaccctatag
tgacacatatgactaaccagtacctgagctctgactctagctgcatatgc
atcaaaagatggctatcgcatctgaagaaggtccattgaccgcaacttta
ttccagttcaggacgtcaggccataatgaatgggtggaaggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_141662663_141663796
seq2: B6Ng01-028P17.b_45_1170

seq1  GAATTCCAGGACAGCCGGAGCTACACAGAAAAACCCTGTCTCAAAACAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCGGAGCTACACAGAAAAACCCTGTCTCAAAACAAA  50

seq1  CAAACAAACAAACAAACCAAAACAAAAACAAACAAACAAACAAACAACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACAAACAAACCAAAACAAAAACAAACAAACAAACAAACAACAA  100

seq1  AAAAAAACCTTCTGAAAATATTCTTATAAATTAGGAATATGGAAGCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACCTTCTGAAAATATTCTTATAAATTAGGAATATGGAAGCCCTA  150

seq1  TTAAAATGTGTAAGAAAAGCATAATATATTCAACTATTGGTATTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTGTAAGAAAAGCATAATATATTCAACTATTGGTATTTCATTT  200

seq1  GGCAGCAGCAATTCCATGAAAGATTTCAAGAAAATCGAACAGACTAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCAGCAATTCCATGAAAGATTTCAAGAAAATCGAACAGACTAGAAG  250

seq1  AGCAATGATAGCATGCAAATAGTAGCATTACATCATCTAACATCTATATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGATAGCATGCAAATAGTAGCATTACATCATCTAACATCTATATC  300

seq1  ATAATCATCAAATTCAGCACAAATAAGGAAAGAAATAAAAAAAAAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCATCAAATTCAGCACAAATAAGGAAAGAAATAAAAAAAAAAAGTA  350

seq1  AGTGCAGTACATCATGAAATCACACATTAGGGTTCAGTGTGTAAAGTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAGTACATCATGAAATCACACATTAGGGTTCAGTGTGTAAAGTTTC  400

seq1  TTGCCACTTAGCTTGACAACTGTGTTCAATACCTGGAACCCACGTAATGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCACTTAGCTTGACAACTGTGTTCAATACCTGGAACCCACGTAATGG  450

seq1  ATAGATACAAAATTTTATGAGATGTCTTGTCATTTTAACATGCATGTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATACAAAATTTTATGAGATGTCTTGTCATTTTAACATGCATGTCAT  500

seq1  TGTATGCAAACACACACATACACACACACATGTGTACATACACACACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCAAACACACACATACACACACACATGTGTACATACACACACTCA  550

seq1  CATAAGAAACATTTATGCTAATCACACAAAGTATTTTAAATAATCATAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGAAACATTTATGCTAATCACACAAAGTATTTTAAATAATCATAAT  600

seq1  TTAAGCACCAATAAGACATGTTTTTAACACCCAGTGGAAACATTAGGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCACCAATAAGACATGTTTTTAACACCCAGTGGAAACATTAGGAAG  650

seq1  TAAGATAGTTGTGAATGTGAGTGAGGGATAGAATTGTGAACAGCCATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATAGTTGTGAATGTGAGTGAGGGATAGAATTGTGAACAGCCATTCA  700

seq1  GTAGATCTGAAAACATCACTCAGAGTATGTTTAGAGATTATAACAGGAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATCTGAAAACATCACTCAGAGTATGTTTAGAGATTATAACAGGAGA  750

seq1  TTTCAGTTGTTCATATGCCCTTCACCTGTGACCCACCTCCTCTGTGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGTTCATATGCCCTTCACCTGTGACCCACCTCCTCTGTGAGGA  800

seq1  AAAGTCATCCTTATCAACTGAGCATGCAGCTTTGCAACTGAGGCACCGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCATCCTTATCAACTGAGCATGCAGCTTTGCAACTGAGGCACCGGG  850

seq1  AGGAGGGAGGGAGGAAGGAGACACCACTTAGCCCCCTCAGCTGAATCTGG  900
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGAGGGAGGGAGGAAGGAGACACCACTTAGCCTCCTCAGCTGAATCTGG  900

seq1  CTGGAAGGTGATGGGGTGTCAGATGTCACAGACAAACTTCCCTCACTTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGGTGATGGGGTGTCAGATGTCACAGACAAACTTCCCTCACTTGT  950

seq1  AGCAATAAGTTTTAAGCCTTATTCACTAGCAATATTTGATTCCTTTTTTT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGCAATAAGTTTTAAGCCTTATTCACTAGCAATATTTGATTCC-TTTTTT  999

seq1  TTGCCATGAACCTATGAACCAAAACAAGGCATATACCACATCTCTGTTGA  1050
      |||||||||||||||  ||| |||| ||||||||||||||| |||| |||
seq2  TTGCCATGAACCTATTGACCCAAAC-AGGCATATACCACATTTCTG-TGA  1047

seq1  TAGGAATTAAGAATATAACA-TCTTAGACTGGAAAATGAATATATAAGGT  1099
      |||||||| ||||||||||| ||||||||||| |||||| ||| ||| ||
seq2  TAGGAATT-AGAATATAACATTCTTAGACTGG-AAATGATTAT-TAA-GT  1093

seq1  CATGCTTATTTTAGTGAGCTGTATGTTGGGTTGAA  1134
      |||||||| |||||||||||||| |||||||||||
seq2  CATGCTTA-TTTAGTGAGCTGTA-GTTGGGTTGAA  1126