BAC Information

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BAC

Clone NameB6Ng01-030B18
Chromosome6 (Build37)
Map Location 138,820,272 - 138,821,306
singlet/doubletsinglet
Overlap geneEG668196
Upstream gene9830102E05Rik, Mgst1, Lmo3, Igbp1b
Downstream geneEG632971, LOC100043898, Pik3c2g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030B18.bB6Ng01-030B18.g
ACCDH860112DH860113
length2761,029
definitionDH860112|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B18, 5' end.DH860113|Mus musculus domesticus DNA, BAC clone: B6Ng01-030B18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tctgtaaactaaagttctatactccatttttttcattatgttgttttggg
ttttggtggttagcttcttgagttcatgactagcagtctcaattaacctg
aacccccaagatctttcagacactggaccaccaaccaggcaccatacacc
aactgatatatggccaccaacacatacacagcagaggactaccaggtcaa
ggttcagtaagagaaggcgaacctaaacttatagaggctggaggccccag
ggagtgggatgtttggtatggtgggg

gaattcccccaagaccataaagtgatgccgcattgttcaataatttgtaa
agcattttctgatgctgttagttaaaatgtgatttaagagttgatgactt
ttaatgattagtgattaaaatatagatctgacaaattgttaaagacagcc
ctctctttctcttgtgtgggtgtgtgtatgtgtgtttatacaaagtatct
gtagttcagtttataaatgtacatcttgttttagcataggaaagttggag
acagcacattaatgcacatatatttctgtggatgaggacaggtatggctg
ataactcttctggaattgcaggagaaagctggctcttttcattttattcg
ctatcttatttttgtttgtatggttctgggtctcgaacttatggccacat
acttgctacacaaacataataccactggcctataccttctctcttcaagt
tgacctgttggatcataaacaattcaagtaagtgtggactagccgaggta
acatacaatttctggcagataaagtgcgcctggcaaagtaattgcattta
cattttaaacgaaactgaaaaggtgatagccgtccacaaggaggaaacaa
tttcaaggactcgagctagtaggaagctgaatgcccatcagcaaccattt
cgcaatacaaagagtcattatagctgtggttattattatttacattgata
ttgcatcatttacaccgcagactactggtgaagctgcgatcttcttttgt
ttgatgtgtttccctttctattaccaacttgaagaattaaacaagaacta
ctgaactgtaccatcaaatgcttaattagcaaattgctaggggatcaata
tatttaatatgtttatgtatttatacacagcagacctagatctgcaacca
gagccactggtaacttcctatatctcttgcacattatttcttcgagtggc
cattctgatgtgagctgaacaatggaatgcaggatgttctagccatttat
cataaaatgcatgctgacgctgtgtaatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_138820272_138821306
seq2: B6Ng01-030B18.g_69_1097

seq1  GAATTCCCCCAAGACCATAAAGTGATGCCGCATTGTTCAATAATTTGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCCAAGACCATAAAGTGATGCCGCATTGTTCAATAATTTGTAA  50

seq1  AGCATTTTCTGATGCTGTTAGTTAAAATGTGATTTAAGAGTTGATGACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTTCTGATGCTGTTAGTTAAAATGTGATTTAAGAGTTGATGACTT  100

seq1  TTAATGATTAGTGATTAAAATATAGATCTGACAAATTGTTAAAGACAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGATTAGTGATTAAAATATAGATCTGACAAATTGTTAAAGACAGCC  150

seq1  CTCTCTTTCTCTTGTGTGGGTGTGTGTATGTGTGTTTATACAAAGTATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCTCTTGTGTGGGTGTGTGTATGTGTGTTTATACAAAGTATCT  200

seq1  GTAGTTCAGTTTATAAATGTACATCTTGTTTTAGCATAGGAAAGTTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTCAGTTTATAAATGTACATCTTGTTTTAGCATAGGAAAGTTGGAG  250

seq1  ACAGCACATTAATGCACATATATTTCTGTGGATGAGGACAGGTATGGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCACATTAATGCACATATATTTCTGTGGATGAGGACAGGTATGGCTG  300

seq1  ATAACTCTTCTGGAATTGCAGGAGAAAGCTGGCTCTTTTCATTTTATTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCTTCTGGAATTGCAGGAGAAAGCTGGCTCTTTTCATTTTATTCG  350

seq1  CTATCTTATTTTTGTTTGTATGGTTCTGGGTCTCGAACTTATGGCCACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTTATTTTTGTTTGTATGGTTCTGGGTCTCGAACTTATGGCCACAT  400

seq1  ACTTGCTACACAAACATAATACCACTGGCCTATACCTTCTCTCTTCAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTACACAAACATAATACCACTGGCCTATACCTTCTCTCTTCAAGT  450

seq1  TGACCTGTTGGATCATAAACAATTCAAGTAAGTGTGGACTAGCCGAGGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTGTTGGATCATAAACAATTCAAGTAAGTGTGGACTAGCCGAGGTA  500

seq1  ACATACAATTTCTGGCAGATAAAGTGCGCCTGGCAAAGTAATTGCATTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAATTTCTGGCAGATAAAGTGCGCCTGGCAAAGTAATTGCATTTA  550

seq1  CATTTTAAACGAAACTGAAAAGGTGATAGCCGTCCACAAGGAGGAAACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAACGAAACTGAAAAGGTGATAGCCGTCCACAAGGAGGAAACAA  600

seq1  TTTCAAGGACTCGAGCTAGTAGGAAGCTGAATGCCCATCAGCAACCATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGACTCGAGCTAGTAGGAAGCTGAATGCCCATCAGCAACCATTT  650

seq1  CGCAATACAAAGAGTCATTATAGCTGTGGTTATTATTATTTACATTGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCAATACAAAGAGTCATTATAGCTGTGGTTATTATTATTTACATTGATA  700

seq1  TTGCATCATTTACACCGCAGACTACTGGTG-AGCTGCGATCTTCTTTTGT  749
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTGCATCATTTACACCGCAGACTACTGGTGAAGCTGCGATCTTCTTTTGT  750

seq1  TTGATGTGTTTCCC-TTCTATTACCAACTTGAAG-ATTAAACAAGAACTT  797
      |||||||||||||| ||||||||||||||||||| ||||||||||||| |
seq2  TTGATGTGTTTCCCTTTCTATTACCAACTTGAAGAATTAAACAAGAAC-T  799

seq1  ACTGAACTGTACCATCAAATGCTT-ATTAGCAAATTGCTAGGTGATCATA  846
      |||||||||||||||||||||||| ||||||||||||||||| ||||| |
seq2  ACTGAACTGTACCATCAAATGCTTAATTAGCAAATTGCTAGGGGATCA-A  848

seq1  TATATTTAATATGTTTATGTATTTATACACAGCAGACCTAGATCTGCAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTAATATGTTTATGTATTTATACACAGCAGACCTAGATCTGCAAC  898

seq1  CAGAGCCACTGGTAACTTCCTATATCTCTTGCACCATTAATTTCTTCCGA  946
      ||||||||||||||||||||||||||||||||| |||| ||||||| |||
seq2  CAGAGCCACTGGTAACTTCCTATATCTCTTGCA-CATT-ATTTCTT-CGA  945

seq1  GT-GACATTCTGATGTGAGCTGAACAGATGGAATTGCAGGATTGTTCTAG  995
      || | ||||||||||||||||||||| |||||| ||||||| ||||||||
seq2  GTGGCCATTCTGATGTGAGCTGAACA-ATGGAA-TGCAGGA-TGTTCTAG  992

seq1  CAAATTTATCATAAAAAATGCAT-CCGACACCTGTGTAATT  1035
      |  |||||||||  ||||||||| | |||  ||||||||||
seq2  C-CATTTATCAT--AAAATGCATGCTGAC-GCTGTGTAATT  1029


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