BAC Information

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BAC

Clone NameB6Ng01-030G07
Chromosome6 (Build37)
Map Location 45,733,099 - 45,734,223
singlet/doubletsinglet
Overlap geneCntnap2
Upstream geneLOC100040210
Downstream geneRbpsuh-rs3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030G07.bB6Ng01-030G07.g
ACCDH860318DH860319
length1,106986
definitionDH860318|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G07, 5' end.DH860319|Mus musculus domesticus DNA, BAC clone: B6Ng01-030G07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatggcatcactgaaaatattggtgacagggaaatactgtttat
tttatagaccattaaggtaaattagcaaattgtttaacagaatggttcaa
aagtggcttgtagtcaggaacttatgatccttatacattttccacaggca
gtatccatcttctgtaaataaacagcatatggcttaagaatgtagtttga
aatgattgctagcatatctcattcttctatattctcacagcttagctggc
acccatctgttatactggaagtatcactctgacatcttcttacttgtcct
tcatctagtattagccagatggtatctgatggtgacatgactttgagaca
aaaatcatatgatcatctcaatatatgaagaaaatcttcgataaaatctt
tcatgtctttgtaataaaagtcctggtgaaaacagaactggaggaagcgt
acatcaacataataaaaaaatatatgtatggcaaaaatgtaaccggatct
tcctaaaatcctgaaaaatttaatgcaactacactatttctgtttctttc
aatagcttgaagcactagctagaccaaaataggacaaaagaaagagtcaa
tggtgccacaggcattttttcctattatttgggagacagaagaagactgt
tttctgaaggttcgaggtctgcatggcctacagagaaaatgctacacaga
gaaaccctgtctttaaaaacaagacaaaagaaagaaataaaaaataagtc
aaagcatccctatttgcagatgatttgataatatatatgagatccctcaa
aattccaatggatagcatctataagtgatcaacacatttgtaaagaggca
gaataaaaagccaacttacaaatatcagtagcatttctatacaccaacaa
caaatatgccaagaaagagatagtggaaacatttccattctaaatatact
tttaaattctaggataaaccaaataacggagatgaaagacctctatagtg
aaattatctcactcatgaacacactatataactaagaagaaacacaagat
gtagaaattcttggctttgtgatgatagttaatgctacttggcaacacca
gaaata

gaattctcacctgaggaataccaaatagctgagaaacaactgaaaaaatg
ttcagcatccttaatcgtcagagaaatgcaaatcaaaacaaccctgagat
tgcatctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agaggctgacgaggatatggagaaagaggaatactcctccactgttggtg
ggattgcaaccttgtacaaccactctggaaatcagtctggcggtttctca
aaaattggacatggtgctactggtggatcccacaatacctctcctgggca
tatatccagaagatgttccaactagtaagaaagaaacatgctccactaca
ttcatagcagccttatttataatagccagaagctggaaagaacccagatg
cccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaataatgaatttatgaaattcctaggcaaa
tggatggacctggacggcatcatcctgagtgaggtaaccaaatcacaaaa
gaactcacacaatatgcactcactgataagtggatattagcccagaaact
tagaatacccaagatataagatacaatttgtgaaacacttgaaactcaag
aagaacggagaccaaagtgtgaatagtttgccccctcttagaattgggaa
caaaacaccacccatgaaaggagatacagagacaaagtttggagctgaaa
ggaaaggacagaccatctagagactgccataaccgggtatccatcccata
aacagcctccgaacgctgacaccatttcatatcctagcaagattttgctg
aaaggaccctgatatagcttgtctgtgagactatgccggggctagcaaac
acagaagtggatgttcacatcagctattggatggatccagggcccaatga
gagccagagaaagactcaagtgtgggcgggggggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_45733099_45734223
seq2: B6Ng01-030G07.b_44_1149 (reverse)

seq1  TATTTCTGTGTG-TGCCAAGTTAGCAATTAAAACTAATCATCACAAAAGC  49
      |||||||| ||| ||||||| ||||| |   |||| |||||||| |||||
seq2  TATTTCTG-GTGTTGCCAAG-TAGCATT---AACT-ATCATCAC-AAAGC  43

seq1  CAAGAAATTTTCTACCATCTTGTGTTTCTATCTTTAGTTATTATAGTGTG  99
      ||||||  |||||| |||||||||||||| || ||||||| |||||||||
seq2  CAAGAA--TTTCTA-CATCTTGTGTTTCT-TC-TTAGTTA-TATAGTGTG  87

seq1  TTCATGAGTTGAGGATTAATTTTCACTATAGAGGTCTTTCATCTCCCTTA  149
      |||||||| ||| |||  | |||||||||||||||||||||||||| |||
seq2  TTCATGAG-TGA-GAT--AATTTCACTATAGAGGTCTTTCATCTCCGTTA  133

seq1  TTTGGTTTATTCCTAGAATTTTAAAAGTATATTTAAGAATGGAAATGTTT  199
      ||||||||| |||||||| ||||||||||||||| |||||||||||||||
seq2  TTTGGTTTA-TCCTAGAA-TTTAAAAGTATATTT-AGAATGGAAATGTTT  180

seq1  CCACTATCTCTTTCTTGGCATATTTGTTGTTGGTGTATAGAAATGCTACT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCTCTTTCTTGGCATATTTGTTGTTGGTGTATAGAAATGCTACT  230

seq1  GATATTTGTAAGTTGGCTTTTTATTCTGCCTCTTTACAAATGTGTTGATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTGTAAGTTGGCTTTTTATTCTGCCTCTTTACAAATGTGTTGATC  280

seq1  ACTTATAGATGCTATCCATTGGAATTTTGAGGGATCTCATATATATTATC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGATGCTATCCATTGGAATTTTGAGGGATCTCATATATATTATC  330

seq1  AAATCATCTGCAAATAGGGATGCTTTGACTTATTTTTTATTTCTTTCTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCTGCAAATAGGGATGCTTTGACTTATTTTTTATTTCTTTCTTT  380

seq1  TGTCTTGTTTTTAAAGACAGGGTTTCTCTGTGTAGCATTTTCTCTGTAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTGTTTTTAAAGACAGGGTTTCTCTGTGTAGCATTTTCTCTGTAGG  430

seq1  CCATGCAGACCTCGAACCTTCAGAAAACAGTCTTCTTCTGTCTCCCAAAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCAGACCTCGAACCTTCAGAAAACAGTCTTCTTCTGTCTCCCAAAT  480

seq1  AATAGGAAAAAATGCCTGTGGCACCATTGACTCTTTCTTTTGTCCTATTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAAAAATGCCTGTGGCACCATTGACTCTTTCTTTTGTCCTATTT  530

seq1  TGGTCTAGCTAGTGCTTCAAGCTATTGAAAGAAACAGAAATAGTGTAGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTAGCTAGTGCTTCAAGCTATTGAAAGAAACAGAAATAGTGTAGTT  580

seq1  GCATTAAATTTTTCAGGATTTTAGGAAGATCCGGTTACATTTTTGCCATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAATTTTTCAGGATTTTAGGAAGATCCGGTTACATTTTTGCCATA  630

seq1  CATATATTTTTTTATTATGTTGATGTACGCTTCCTCCAGTTCTGTTTTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATTTTTTTATTATGTTGATGTACGCTTCCTCCAGTTCTGTTTTCA  680

seq1  CCAGGACTTTTATTACAAAGACATGAAAGATTTTATCGAAGATTTTCTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTTTTATTACAAAGACATGAAAGATTTTATCGAAGATTTTCTTC  730

seq1  ATATATTGAGATGATCATATGATTTTTGTCTCAAAGTCATGTCACCATCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGAGATGATCATATGATTTTTGTCTCAAAGTCATGTCACCATCA  780

seq1  GATACCATCTGGCTAATACTAGATGAAGGACAAGTAAGAAGATGTCAGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACCATCTGGCTAATACTAGATGAAGGACAAGTAAGAAGATGTCAGAG  830

seq1  TGATACTTCCAGTATAACAGATGGGTGCCAGCTAAGCTGTGAGAATATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTTCCAGTATAACAGATGGGTGCCAGCTAAGCTGTGAGAATATAG  880

seq1  AAGAATGAGATATGCTAGCAATCATTTCAAACTACATTCTTAAGCCATAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATGAGATATGCTAGCAATCATTTCAAACTACATTCTTAAGCCATAT  930

seq1  GCTGTTTATTTACAGAAGATGGATACTGCCTGTGGAAAATGTATAAGGAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTATTTACAGAAGATGGATACTGCCTGTGGAAAATGTATAAGGAT  980

seq1  CATAAGTTCCTGACTACAAGCCACTTTTGAACCATTCTGTTAAACAATTT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTCCTGACTACAAGCCACTTTTGAACCATTCTGTTAAACAATTT  1030

seq1  GCTAATTTACCTTAATGGTCTATAAAATAAACAGTATTTCCCTGTCACCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTTACCTTAATGGTCTATAAAATAAACAGTATTTCCCTGTCACCA  1080

seq1  ATATTTTCAGTGATGCCATTGAATTC  1125
      ||||||||||||||||||||||||||
seq2  ATATTTTCAGTGATGCCATTGAATTC  1106


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