BAC Information

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BAC

Clone NameB6Ng01-032I03
Chromosome6 (Build37)
Map Location 130,817,656 - 130,818,595
singlet/doubletsinglet
Overlap geneEG636947
Upstream geneKlra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566
Downstream geneLOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032I03.bB6Ng01-032I03.g
ACCDH861826DH861827
length936616
definitionDH861826|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I03, 5' end.DH861827|Mus musculus domesticus DNA, BAC clone: B6Ng01-032I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatacaggagagaaaccttacaaatgtaatgagtgtgagaaatct
tttacacagtcctacaaacttcaagttcactacagaatccatacaggaca
gaagccttacaaatgtaatgaatgtggcaagtcttttatacggaacacag
accttaaagttcactaccgaatccatacaagagtgaaaccctaaattatt
ttttggttgatgcaaatcttttacaaagaactcagagcttaaagttcacc
aaagaatctgtacaggggaaaaaacttataaatataatcaaagtggcaaa
tcctttacacaacactcagatcatgaagctcaccacagaatccatactgg
agagaatctttacaaatgaaatgaaggtggcatatcattcaataaatctc
caagtctttattttcactacagagtctacacaagagataaaccttacaaa
tgtggacttgtgacaatctttaacctggtcctccactttccaaagttcat
caaagttcatatactggaaaacaaccttgtaagtgtagtgagtgtagaaa
atatttttcctatcctcaaatcttcaatatcacctcagaatacaaactag
aaactaccttactaatgaaaggaatgtgggatattcttgacatggaaata
atgccttcaaaagacgacccagcatgcatcctggagagaaacattacaaa
tatacaggacatggcaaatattttagcacaacctcaaagcttggattata
tagattcatgcatgatgccaacttataggacattattgtctcaccattca
taaggaaactttattttaattgagaaagttattgtcagatttacattatg
ttaaaaccctattatcagagattctcataaagaaaccatatgttgatagt
attcaaaactttttactcccaaatcaacttatatta
gaattctttgagttccttctccacgcctttgggcattttctcttaagtct
cccacatagactcctgagaatgtctcacctcacaggtctctagtaagttc
tagagggtcccctgaactcccaaccaactcaggctgcacatttttattca
tttttctcaccctcttggcttctctcttgtctctaccattcctgatcctg
ttctctttttccccctccctttccataccaggtcactccctccttctgaa
agacatgattatctttttcctccttctgagtggaaataaattatccccac
ttgggtctttcagctttttaaacttcttatgatctgtggcttttacacta
tgtattctgtacttttgggctacttacaaactcattagtgagtacatgcc
acgcatgtccctttgggtctgggttacctcacccaagatattttctactt
ccatctatttgcttgcaaattcattatgtcctctttcctagttgcttggt
gtgatggtttgtttgtccttggaccagggagtggaaccatttgaaggtgt
ggcctttttggaataggtgtgacttcgttggaatgggtgtgtcactgtgg
ggtgtggggtatagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130817656_130818595
seq2: B6Ng01-032I03.b_35_970 (reverse)

seq1  TAATATAAGTTGAATTTGGGAGTAAAAAGTTTTTGAATACTATCAACATA  50
      |||||||||||| |||||||||||||||| ||||||||||||||||||||
seq2  TAATATAAGTTG-ATTTGGGAGTAAAAAG-TTTTGAATACTATCAACATA  48

seq1  TGGTTTCTTTATGAGAATTCTCTGATAATAGGGTTTTAACATTATGTAAA  100
      ||||||||||||||||| |||||||||||||||||||||||| |||||||
seq2  TGGTTTCTTTATGAGAA-TCTCTGATAATAGGGTTTTAACATAATGTAAA  97

seq1  TTCTGACAATAACTTTCTCAATTAAAATAATGTTTCCTTATGAATGGTGA  150
       ||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  -TCTGACAATAACTTTCTCAATTAAAATAAAGTTTCCTTATGAATGGTGA  146

seq1  GACAATAATGTCCTATTAAGTTGGCATCATGCATGAATCTATATAATCCA  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GACAATAATGTCCTA-TAAGTTGGCATCATGCATGAATCTATATAATCCA  195

seq1  AGCTTTGAGGTTGTGCTAAAATATTTGCCATGTCCTGTATATTTGTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGAGGTTGTGCTAAAATATTTGCCATGTCCTGTATATTTGTAATG  245

seq1  TTTCTCTCCAGGATGCATGCTGGGTCGTC-TTTGAAGGCATTATTTCCAT  299
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTTCTCTCCAGGATGCATGCTGGGTCGTCTTTTGAAGGCATTATTTCCAT  295

seq1  GTCAAGAATATCCCACATTCCTTTCATTAGTAAGGTAGTTTCTAGTTTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGAATATCCCACATTCCTTTCATTAGTAAGGTAGTTTCTAGTTTGT  345

seq1  ATTCTGAGGTGATATTGAAGATTTGAGGATAGGAAAAATATTTTCTACAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGAGGTGATATTGAAGATTTGAGGATAGGAAAAATATTTTCTACAC  395

seq1  TCACTACACTTACAAGGTTGTTTTCCAGTATATGAACTTTGATGAACTTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTACACTTACAAGGTTGTTTTCCAGTATATGAACTTTGATGAACTTT  445

seq1  GGAAAGTGGAGGACCAGGTTAAAGATTGTCACAAGTCCACATTTGTAAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGGAGGACCAGGTTAAAGATTGTCACAAGTCCACATTTGTAAGG  495

seq1  TTTATCTCTTGTGTAGACTCTGTAGTGAAAATAAAGACTTGGAGATTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTCTTGTGTAGACTCTGTAGTGAAAATAAAGACTTGGAGATTTAT  545

seq1  TGAATGATATGCCACCTTCATTTCATTTGTAAAGATTCTCTCCAGTATGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGATATGCCACCTTCATTTCATTTGTAAAGATTCTCTCCAGTATGG  595

seq1  ATTCTGTGGTGAGCTTCATGATCTGAGTGTTGTGTAAAGGATTTGCCACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTGGTGAGCTTCATGATCTGAGTGTTGTGTAAAGGATTTGCCACT  645

seq1  TTGATTATATTTATAAGTTTTTTCCCCTGTACAGATTCTTTGGTGAACTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTATATTTATAAGTTTTTTCCCCTGTACAGATTCTTTGGTGAACTT  695

seq1  TAAGCTCTGAGTTCTTTGTAAAAGATTTGCATCAACCAAAAAATAATTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTGAGTTCTTTGTAAAAGATTTGCATCAACCAAAAAATAATTTA  745

seq1  GGGTTTCACTCTTGTATGGATTCGGTAGTGAACTTTAAGGTCTGTGTTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCACTCTTGTATGGATTCGGTAGTGAACTTTAAGGTCTGTGTTCC  795

seq1  GTATAAAAGACTTGCCACATTCATTACATTTGTAAGGCTTCTGTCCTGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAGACTTGCCACATTCATTACATTTGTAAGGCTTCTGTCCTGTA  845

seq1  TGGATTCTGTAGTGAACTTGAAGTTTGTAGGACTGTGTAAAAGATTTCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTCTGTAGTGAACTTGAAGTTTGTAGGACTGTGTAAAAGATTTCTC  895

seq1  ACACTCATTACATTTGTAAGGTTTCTCTCCTGTATGAATTC  940
      |||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATTACATTTGTAAGGTTTCTCTCCTGTATGAATTC  936