BAC Information

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BAC

Clone NameB6Ng01-034A01
Chromosome6 (Build37)
Map Location 18,835,636 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034A01.bB6Ng01-034A01.g
ACCDH862888DH862889
length992490
definitionDH862888|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A01, 5' end.DH862889|Mus musculus domesticus DNA, BAC clone: B6Ng01-034A01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttctaatggtttcaactcagcttttctggcccaaactcctctc
tgagctgattgaatcaatctgacttctcttaacttctcagggaatcgctc
tgcttaggctcaagctaactctagcaacgtgtcctaatcttctggctctg
tgtttgttggcattcaggcataatcactcaaacactatgtacaccatctc
agttaagcaagtatagtttattgaacacacacgataatactgaacatcca
gaaccacaaaaaagtcctagcctgctctcagagtaattgtttatgagaaa
atccaggttcaaaagtttaaagagcaaagaggagagcagttgccttacta
gcaaagtattatcggtaacccttaagttggtttgtcctgagtaagtgaac
gagatggtacatgggtgatgaacagggaatttcagaacattgagataaaa
gaatctgaatatcacagttataacttttagcaaattagtagtattcttca
gagtgagccataaaatttatagtgagctcctgcataggtgcaagaaggga
tgccctgtggttatcattgactcaagccatcttggacataacaattcata
ttaacctttgatttaatggtccctatttaaaactttgtggaatttcttaa
gattaactcatacaaaacactcagaatatactggaacaaaatacattttg
tgatcagaatgtccttgaacagtcattttgctctctcaatgactggcagg
catggatcaaaatagttacagctcttgttgggatggggatatttgtctga
cataacattcttacactctggtttccactgcctctgctcccctgactgag
ctgcttaaactcacaaactccactgcattctatgattgtactgatgaact
aatcctaactgattgactgaactgattttcactcctctctctcttccagg
acggccctaaagctccccttcttgggtaatccctataaagtg

tttgttcagttctgagccccatttttaatggggttatttgattttctgat
gtccaccttcttgagttctttatatatattggatattagtcccctatctg
atttaggataggtaaagatcctttcccaatctgttggtggtctttttgtc
ttattgacggtgtcttttgccttctgtgccccattttttaatgggattat
tttattttctgaagtccatattcttgagttctttatatatactggatatt
agtcccctatctcatttgggattagtaaagatcctttcccaatctgttgg
tggcctttttgtcttattgacagtgtcttttgccttacagaagctttgca
attttattaggtcccatttgatgattctcgaccttacagcagaagccatt
gctgttcttttcaggaatttttcccctgtgcttatatctttgaggctttt
ctccactttctactctataagtttcagtgtctctgttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835636_18835968
seq2: B6Ng01-034A01.g_65_560 (reverse)

seq1  AAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTG  50
      |||| ||||||||||||||||||||||| ||||||||| |||||||||  
seq2  AAAAACAGAGACACTGAAACTTATAGAGTAGAAAGTGGAGAAAAGCCTCA  50

seq1  AAGATATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGT  99
      |||||||  ||| ||||||||| |||||||| |||||||||||||| | |
seq2  AAGATATAAGCACAGGGGAAAAATTCCTGAAAAGAACAGCAATGGCTTCT  100

seq1  GCTGTGAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTT  149
      ||||| |||| |||||||  ||||||||||||||| ||| | ||||| ||
seq2  GCTGTAAGGTCGAGAATCATCAAATGGGACCTAATAAAATTGCAAAGCTT  150

seq1  CTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATT  199
      ||| |||||||||||||| ||||||||||||||||| |||||||||||||
seq2  CTGTAAGGCAAAAGACACTGTCAATAAGACAAAAAGGCCACCAACAGATT  200

seq1  GGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAAC  249
      ||||||||||||||||  |||| |||| ||||||||||||||||||||  
seq2  GGGAAAGGATCTTTACTAATCCCAAATGAGATAGGGGACTAATATCCAGT  250

seq1  ATATATAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCAT  299
      ||||||||||||||||||||  ||||||||||||||| |||||| |||||
seq2  ATATATAAAGAACTCAAGAATATGGACTTCAGAAAATAAAATAATCCCAT  300

seq1  TAATAAATGGGGCTCAGAACTGAACAAAGAATTC----------------  333
      ||| ||||||||| |||||  |   |||||   |                
seq2  TAAAAAATGGGGCACAGAA--GGCAAAAGA---CACCGTCAATAAGACAA  345

seq1  --------------------------------------------------  333
                                                        
seq2  AAAGACCACCAACAGATTGGGAAAGGATCTTTACCTATCCTAAATCAGAT  395

seq1  --------------------------------------------------  333
                                                        
seq2  AGGGGACTAATATCCAATATATATAAAGAACTCAAGAAGGTGGACATCAG  445

seq1  --------------------------------------------------  333
                                                        
seq2  AAAATCAAATAACCCCATTAAAAATGGGGCTCAGAACTGAACAAAGAATT  495

seq1  -  333
       
seq2  C  496


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