MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-034G10
Chromosome	6 (Build37)
Map Location	111,782,516 - 111,783,355
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Grm7
Downstream gene	1700054K19Rik, Lmcd1, D630042P16Rik, LOC619975, Cav3, Oxtr, LOC434076, EG434077, Rad18, Srgap3
Link	Open Mouse BAC browser

Click to get alignment info.

name	Grm7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108073 MGI:1351344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700054K19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67336 MGI:1914586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs

name	Lmcd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30937 MGI:1353635
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D630042P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:243612 MGI:2443733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC619975 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:619975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins pseudo : _no_value

name	Cav3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12391 MGI:107570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Oxtr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18430 MGI:109147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC434076 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:434076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 94 ESTs, 5 Proteins pseudo : _no_value

name	EG434077 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins

name	Rad18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58186 MGI:1890476
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srgap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:259302 MGI:2152938
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grm7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130419 GeneID:108073 MGI:1351344
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 7 transcript_id : NM_177328.3

name	1700054K19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149255260 GeneID:67336 MGI:1914586
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 4 ESTs product : RIKEN cDNA 1700054K19 gene transcript_id : XM_001480075.1

name	Lmcd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21450156 GeneID:30937 MGI:1353635
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM and cysteine-rich domains 1 transcript_id : NM_144799.1

name	D630042P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802588 GeneID:243612 MGI:2443733
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA D630042P16 gene transcript_id : NM_175525.3

name	Cav3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982475 GeneID:12391 MGI:107570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : caveolin 3 transcript_id : NM_007617.2

name	Oxtr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487242 GeneID:18430 MGI:109147
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oxytocin receptor transcript_id : NM_001081147.1

name	EG434077 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94378025 GeneID:434077 MGI:3645010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 mRNAs, 215 ESTs, 4 Proteins product : predicted gene, EG434077 transcript_id : XM_485815.4

name	Rad18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:10946725 GeneID:58186 MGI:1890476
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAD18 homolog (S. cerevisiae) transcript_id : NM_021385.1

name	Srgap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125345725 GeneID:259302 MGI:2152938
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SLIT-ROBO Rho GTPase activating protein 3 transcript_id : NM_080448.3

name	Grm7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:60460877 GeneID:108073 MGI:1351344
definition	GO_component : GO:0048787 - active zone presynaptic plasma membrane [Evidence TAS]; GO:0016021 - integral to membrane [Evidence IEA] GO_function : GO:0005246 - calcium channel regulator activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001642 - group III metabotropic glutamate receptor activity [Evidence TAS]; GO:0030165 - PDZ domain binding [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005245 - voltage-gated calcium channel activity [Evidence IDA] GO_process : GO:0001662 - behavioral fear response [Evidence IMP]; GO:0001661 - conditioned taste aversion [Evidence IMP]; GO:0043526 - neuroprotection [Evidence TAS]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007608 - sensory perception of smell [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA]; GO:0007268 - synaptic transmission [Evidence IDA]; GO:0019226 - transmission of nerve impulse [Evidence IMP] codon_start : 1 note : G protein-coupled receptor, family C, group 1, member G; G protein-coupled receptor GRM7; metabotropic glutamate receptor 7; mGlu7a receptor product : glutamate receptor, metabotropic 7 protein_id : NP_796302.2

name	1700054K19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149255261 GeneID:67336 MGI:1914586
definition	codon_start : 1 product : hypothetical protein LOC67336 protein_id : XP_001480125.1

name	Lmcd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21450157 CCDS:CCDS20403.1 GeneID:30937 MGI:1353635
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003714 - transcription corepressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IGI] codon_start : 1 product : LIM and cysteine-rich domains 1 protein_id : NP_659048.1

name	D630042P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425294 CCDS:CCDS20405.1 GeneID:243612 MGI:2443733
definition	codon_start : 1 product : Fls485 protein protein_id : NP_780734.1

name	Cav3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680852 CCDS:CCDS20406.1 GeneID:12391 MGI:107570
definition	GO_component : GO:0005901 - caveola [Evidence TAS]; GO:0016599 - caveolar membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence IDA]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence TAS] codon_start : 1 product : caveolin 3 protein_id : NP_031643.1

name	Oxtr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487243 GeneID:18430 MGI:109147
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004990 - oxytocin receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0005000 - vasopressin receptor activity [Evidence IEA] GO_process : GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : oxytocin receptor protein_id : NP_001074616.1

name	EG434077 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51716991 GeneID:434077 MGI:3645010
definition	codon_start : 1 product : similar to RIKEN cDNA 0610010K06 gene protein_id : XP_485815.1

name	Rad18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:10946726 GeneID:58186 MGI:1890476
definition	GO_component : GO:0000785 - chromatin [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006281 - DNA repair [Evidence IEA]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation note : post-replication repair protein RAD18SC product : RAD18 homolog protein_id : NP_067360.1

name	Srgap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125345726 GeneID:259302 MGI:2152938
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 exception : mismatches in translation note : rho GTPase activating protein 14; SLIT-ROBO Rho GTPase activating protein 2 product : brain stress early protein Gbi protein_id : NP_536696.3

name	(CDS detail)
type	STS
link
xref	UniSTS:130648
definition	standard_name : D6Mit104

name	(CDS detail)
type	STS
link
xref	UniSTS:29417
definition	standard_name : RH44758

name	(CDS detail)
type	STS
link
xref	UniSTS:124450
definition	standard_name : 42.MHAa96d6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130651
definition	standard_name : D6Mit108

name	(CDS detail)
type	STS
link
xref	UniSTS:257635
definition	standard_name : px-35d4

name	(CDS detail)
type	STS
link
xref	UniSTS:277300
definition	standard_name : GRM7_1388

name	(CDS detail)
type	STS
link
xref	UniSTS:185677
definition	standard_name : BB176677

name	(CDS detail)
type	STS
link
xref	UniSTS:142587
definition	standard_name : D6Mit343

name	(CDS detail)
type	STS
link
xref	UniSTS:130834
definition	standard_name : D6Mit287

name	(CDS detail)
type	STS
link
xref	UniSTS:123095
definition	standard_name : 11.MMHAP90FRD8.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130941
definition	standard_name : D6Mit389

name	(CDS detail)
type	STS
link
xref	UniSTS:130956
definition	standard_name : D6Mit54

name	(CDS detail)
type	STS
link
xref	UniSTS:235517
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:244322
definition	standard_name : AI071230

name	(CDS detail)
type	STS
link
xref	UniSTS:179431
definition	standard_name : AW455500

name	(CDS detail)
type	STS
link
xref	UniSTS:159555
definition	standard_name : AI385751

name	(CDS detail)
type	STS
link
xref	UniSTS:235518
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:484965
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:271619
definition	standard_name : PMC170950P1

name	(CDS detail)
type	STS
link
xref	UniSTS:272964
definition	standard_name : PMC316374P3

name	(CDS detail)
type	STS
link
xref	UniSTS:130650
definition	standard_name : D6Mit107

name	(CDS detail)
type	STS
link
xref	UniSTS:235519
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:130776
definition	standard_name : D6Mit23

name	(CDS detail)
type	STS
link
xref	UniSTS:96455
definition	standard_name : RH102121

name	(CDS detail)
type	STS
link
xref	UniSTS:125292
definition	standard_name : MHAa70g1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:215151
definition	standard_name : RH131868

name	(CDS detail)
type	STS
link
xref	UniSTS:159556
definition	standard_name : AI452337

name	(CDS detail)
type	STS
link
xref	UniSTS:123899
definition	standard_name : 30.MMHAP28FRB12.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:130882
definition	standard_name : D6Mit328

name	LOC619975 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255396 GeneID:619975
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 9 Proteins product : similar to ribosomal protein L23a pseudo : _no_value transcript_id : XR_034821.1

name	LOC434076 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149255397 GeneID:434076
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 94 ESTs, 5 Proteins product : similar to zinc finger protein 289 pseudo : _no_value transcript_id : XR_035710.1

clone name	MSMg01-443P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067K12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-174G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309M01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-100D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057I20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357J18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-089J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116B06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-465K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-349P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-190B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-352L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-231B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272A20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-524J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-319H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-478B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-364K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330E05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-354I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-163O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203K10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-169N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-065N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-268L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-481A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-350O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-299L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153I07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270E18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-095D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-293A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-200N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-023G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191M11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-034G10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-079M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122I15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-121C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087D18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300G24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183K21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087A08
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-034G10.b	B6Ng01-034G10.g
ACC	DH863166	DH863167
length	827	780
definition	DH863166\|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G10, 5' end.	DH863167\|Mus musculus domesticus DNA, BAC clone: B6Ng01-034G10, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattcaagttcaatttccactacccacattgtaagagctctcaactact tgtaactatggtcccaagggatgtgataccctcttctagactctgtgaac acctgcatatatgtggcacacacacatatacacagattaaaattaaaaaa taattaaaagtttaactagaaaagaactcattcttctcctgctctctctc tctctctctctctctctctctctctctctctccacacacacacacacaca cacacacaggcacttgtttcttgttggcattaccactaataagtttgccc atgtatgaaatatactgtttgtaaaattaaataaataaaagcttcctttg tctaagcaagcactctaccaactgagctatatgtctagtaataggctaat atgaatcagttcccaattcactccttaagtttctatctatgtgcacaggg tagataatttcactgatccacctttggttacacactcattcctattataa ctgggcatagtcaacaggaaaacaaagttgccgtgtgatccctttgtaac ttaccaatgggcagcagataatggtgaagccaagagtttctaaaaaagag agtcataaactttaaaaggaatctttctaagattatctactacaaagact ttgtgcactcagggtctacttcagcagattttcatagactcctgtggttc tatactttcctaccattcacctatactatgctatttctttttttaagatt attattattcaggatgtgagtcactattgctatcttaaacacccaaagga ggcattggatctccattacagatggtt	gaattctcactttgaggaataccgaatggcagagaagcacttgaaaaaat gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga ttccacctcacaccagtcagaatggctaagatgaaaaattcaggtgacag cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt gggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctc agaaaactggacatagtactaccggaggatccagcaatacctctcctggg catatatccagaagatgccccaactggtaagaaggacacatgctccacta tgttcatagcagccttatttataatagccagaagctggaaagaacctaga tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat ggagtactactcagctattaaaaagaatggatttatgaaattcctagcca aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa agtaactcacacaatatgtactcactgataagtggatattagccccaaac ctaggatacccaagatataagatataatttgctaaacacatgaaactcaa gaagaatgaagactgaagtgtggacactatgcccctcctttagatttggg aacaaaacacccatggaaggagttacagagacaaaatttggagctgagat gaaaaggatggaccatgtagagactgccat
quality values	Open. Hide. 61 47 39 30 61 38 29 47 47 61 61 38 32 61 61 61 61 61 49 37 61 61 61 61 61 59 49 16 13 17 13 23 13 13 12 11 35 37 59 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 59 61 61 61 59 59 40 30 30 28 30 35 30 41 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 52 59 59 59 59 59 61 59 59 59 59 59 61 61 59 59 61 59 61 59 61 59 59 61 61 61 59 59 59 59 59 59 59 61 61 59 61 45 52 59 59 49 49 61 59 61 61 59 59 59 59 59 59 52 49 52 39 59 59 61 61 61 61 61 61 61 61 59 59 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 49 59 59 59 59 61 59 55 59 59 61 61 61 59 52 59 59 59 59 59 59 59 59 59 52 59 61 61 61 52 61 55 55 52 55 55 55 55 55 55 52 19 18 15 15 23 27 52 55 37 52 52 52 61 49 61 61 61 52 52 52 43 18 24 52 50 41 49 43 29 26 31 37 32 55 55 55 61 61 41 32 27 10 43 43 27 23 25 22 26 37 50 47 37 50 50 55 55 55 36 50 35 35 55 55 50 52 43 45 53 50 17 12 10 7 9 14 24 14 24 15 39 53 53 39 53 50 61 50 53 61 31 53 53 39 43 52 47 53 53 39 47 38 22 40 45 39 31 39 43 24 22 31 47 47 24 45 42 43 47 45 39 47 47 42 28 17 53 47 47 53 43 50 23 47 38 53 57 53 39 40 35 45 42 34 50 38 53 29 43 21 47 37 52 45 38 38 28 30 40 40 40 19 33 45 50 32 29 53 10 12 6 5 7 10 36 11 34 12 21 14 43 38 38 33 38 27 31 20 12 20 25 37 57 47 45 30 33 40 31 8 41 25 41 34 22 45 38 24 34 36 36 20 25 35 9 41 25 53 14 50 45 22 41 29 24 24 19 12 26 24 9 53 31 42 13 18 22 36 42 32 26 29 17 16 41 30 23 36 37 27 32 42 38 34 30 31 10 27 12 28 22 13 8 10 26 10 13 12 37 40 22 20 21 8 16 21 22 45 14 8 11 11 32 35 31 24 10 18 27 30 29 16 36 9 13 36 33 23 20 15 41 32 28 37 37 31 22 10 10 11 29 23 36 48 29 37 28 19 19 10 22 18 12 24 21 9 46 6 32 32 47 30 25 7 44 24 28 41 10 45 30 31 15 9 16 10 12 17 10 26 23 16 23 13 5 29 30 23 15 8 25 7 27 21 5 33 31 38 20 24 15 29 12 13 8 30 4 29 30 16 43 41 17 14 41 34 28 10 39 8 9 31 11 7 7 6 4 8 21 10 8 8 13 20 13 16 13 24 10 21 15 16 20 31 20 33 20 29 30 14 25 15 20 7 13 38 10 9 17 14 9 8 11 30 15 12 34 23 31 16 11 9 6 10 14 15 28 12 9 13 11 9 7 5 10 11 29 22 7 5	Open. Hide. 61 47 37 49 28 14 14 22 10 18 8 10 12 13 19 12 35 34 41 59 49 59 59 59 59 59 59 61 61 59 59 45 61 49 61 59 59 61 61 59 61 61 59 55 55 61 61 59 49 49 59 38 36 36 24 26 33 30 41 59 61 59 61 61 61 61 59 59 61 59 59 35 59 43 59 59 52 59 61 59 52 52 59 59 59 52 49 59 59 59 59 59 61 59 61 61 59 59 43 59 59 52 52 52 38 52 59 61 59 52 59 52 59 59 59 43 52 59 49 49 61 59 59 61 61 45 59 44 43 29 59 59 59 59 59 52 59 59 59 59 59 52 44 59 59 61 59 59 59 61 59 59 52 61 61 61 61 61 61 61 59 59 59 61 59 59 59 61 59 59 61 61 59 61 61 61 59 61 59 59 59 59 59 49 59 59 61 61 52 49 52 39 52 59 61 52 52 59 59 59 61 59 59 59 52 49 59 44 39 59 61 59 59 59 61 59 59 59 59 59 59 59 45 59 59 59 59 59 59 59 59 49 52 45 39 27 45 59 52 59 59 36 49 59 49 59 61 59 59 59 38 35 59 52 19 28 15 16 30 23 59 52 49 49 43 36 37 41 43 49 41 49 39 59 59 59 30 37 44 43 45 59 59 36 39 35 36 49 45 52 52 59 59 59 59 59 52 59 59 59 31 34 43 36 39 34 59 49 52 37 36 59 59 33 61 59 59 59 59 59 59 49 45 49 44 59 49 34 39 44 36 59 44 37 61 59 49 38 52 28 49 59 61 61 61 61 59 61 38 43 41 49 38 45 61 34 43 32 27 31 28 30 59 59 44 41 28 33 24 32 24 39 23 38 34 49 59 45 49 38 36 59 52 59 59 52 52 50 41 37 52 39 59 59 52 52 45 37 29 41 49 49 59 52 59 59 52 52 45 52 52 45 52 61 49 59 52 39 32 49 36 25 32 38 59 45 36 52 45 39 52 45 52 23 28 22 15 18 28 52 23 19 15 13 25 13 20 20 35 38 52 43 43 28 27 36 36 43 36 37 31 35 27 33 41 41 43 49 43 36 43 43 40 40 37 55 52 52 18 13 17 8 11 17 39 41 28 36 22 27 28 36 52 52 37 52 30 30 41 26 55 52 52 61 50 55 50 55 61 61 61 55 55 61 41 50 37 55 55 37 55 61 61 55 61 61 49 38 50 50 34 43 55 47 29 25 14 38 50 55 39 55 55 43 43 55 50 55 50 10 10 10 8 9 9 12 50 43 39 52 50 53 27 53 61 43 52 61 43 50 35 39 35 14 21 24 61 39 43 9 43 32 35 53 43 52 39 35 41 41 43 53 52 31 23 24 13 16 20 31 35 50 39 32 21 27 19 17 17 14 47 39 50 45 53 47 20 28 20 24 20 40 28 33 43 34 45 39 46 15 37 39 39 23 20 30 30 43 50 32 45 42 45 27 27 31 40 30 12 28 22 42 22 27 50 38 30 50 35 40 28 53 30 40 53 40 22 14 9 25 14 27 17 27 26 23 38 45 45 30 30 28 16 19 30 38 36 50 14 45 30 30 8 17 10 30 30 38 30 24 13 19 34 28 20 20 20 19 20 35 30 30 14 17 22 12 21 53 45 53 40 33 35 18 32 53 30 18 35 16 29 29 16 23 24 12 10 28 15 32 15 28 8 20 29 17 36 8 17 6 10 8 52 34 35 9 17 14 8 13 15 33 15 36 35 42 40 20 27 13 31 18 37 30 27 52 29 23 15 17

Alignment Information

BAC End 1

BAC End 2

seq1: chr6_111782516_111783355
seq2: B6Ng01-034G10.b_43_869 (reverse)

seq1  AACCATCTGTAATGGAGATCCAATGCCCTCCTCTGGTGTGTCTAAAGATA  50
      ||||||||||||||||||||||||| |||||| ||| |||| | ||||||
seq2  AACCATCTGTAATGGAGATCCAATG-CCTCCTTTGG-GTGT-TTAAGATA  47

seq1  GCAATAGTGTACTCACATACATGAAATAAATAAATAAATCTTTAAAAAAA  100
      ||||||||| |||||||| | ||||   |||||   ||||||   |||||
seq2  GCAATAGTG-ACTCACAT-CCTGAA--TAATAA--TAATCTT---AAAAA  88

seq1  AAGAAATAGCATAGTATAGGTGAATTGTAAGGAAAGGTATAGAAACCACA  150
      ||||||||||||||||||||||||| || |||||| |||||| |||||||
seq2  AAGAAATAGCATAGTATAGGTGAATGGT-AGGAAA-GTATAG-AACCACA  135

seq1  GGAGTCTATGAAAATCTTGCTGAAGTAGACCCTGAGTGCACAAAGTCTTT  200
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GGAGTCTATGAAAATC-TGCTGAAGTAGACCCTGAGTGCACAAAGTCTTT  184

seq1  GTAGTAGATAATCTTAG-AAGATTCCTTTT-AAGTTTATGACTCTCTTCT  248
      ||||||||||||||||| |||||||||||| ||||||||||||||||| |
seq2  GTAGTAGATAATCTTAGAAAGATTCCTTTTAAAGTTTATGACTCTCTTTT  234

seq1  TTAGAAACTCTTGGCTTCACCATTATCTGCTGCCCATTGGTAAGTTAC-A  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTAGAAACTCTTGGCTTCACCATTATCTGCTGCCCATTGGTAAGTTACAA  284

seq1  AGGGACCACACGGCAACTTTGTTTTCCTGTTGACTATGCCCAGTTATAAT  347
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATCACACGGCAACTTTGTTTTCCTGTTGACTATGCCCAGTTATAAT  334

seq1  AGGAATGAGTGTGTAACCAAAGGTGGATCAGTGAAATTATCTACCCTGTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGAGTGTGTAACCAAAGGTGGATCAGTGAAATTATCTACCCTGTG  384

seq1  CACATAGATAGAAACTTAAGGAGTGAATTGGGAACTGATTCATATTAGCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGATAGAAACTTAAGGAGTGAATTGGGAACTGATTCATATTAGCC  434

seq1  TATTACTAGACATATAGCTCAGTTGGTAGAGTGCTTGCTTAGACAAAGGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTAGACATATAGCTCAGTTGGTAGAGTGCTTGCTTAGACAAAGGA  484

seq1  AGCTTTTATTTATTTAATTTTACAAACAGTATATTTCATACATGGGCAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTATTTATTTAATTTTACAAACAGTATATTTCATACATGGGCAAA  534

seq1  CTTATTAGTGGTAATGCCAACAAGAAACAAGTGCCTGTGTGTGTGTGTGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAGTGGTAATGCCAACAAGAAACAAGTGCCTGTGTGTGTGTGTGT  584

seq1  GTGTGTGTGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  634

seq1  AGCAGGAGAAGAATGAGTTCTTTTCTAGTTAAACTTTTAATTATTTTTTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGAAGAATGAGTTCTTTTCTAGTTAAACTTTTAATTATTTTTTA  684

seq1  ATTTTAATCTGTGTATATGTGTGTGTGCCACATATATGCAGGTGTTCACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAATCTGTGTATATGTGTGTGTGCCACATATATGCAGGTGTTCACA  734

seq1  GAGTCTAGAAGAGGGTATCACATCCCTTGGGACCATAGTTACAAGTAGTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAGAAGAGGGTATCACATCCCTTGGGACCATAGTTACAAGTAGTT  784

seq1  GAGAGCTCTTACAATGTGGGTAGTGGAAATTGAACTTGAATTC  840
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCTCTTACAATGTGGGTAGTGGAAATTGAACTTGAATTC  827

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information