BAC Information

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BAC

Clone NameB6Ng01-034P14
Chromosome6 (Build37)
Map Location 21,564,893 - 21,565,924
singlet/doubletsinglet
Overlap geneKcnd2
Upstream geneLOC100041343
Downstream geneTspan12, LOC100041358, Ing3, A430107O13Rik, LOC667307, Wnt16, D6Wsu176e, LOC100040948
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034P14.bB6Ng01-034P14.g
ACCDH863569DH863570
length1,013782
definitionDH863569|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P14, 5' end.DH863570|Mus musculus domesticus DNA, BAC clone: B6Ng01-034P14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagattaatattgtttggactgtacgttccattgcatagattac
cttctacatctaaaactaaagtaattctatgtatttttgatcctatcaac
tgatagtaaaagcatcaagtatagatagttcattgttctctatttagtct
aacataagtattatagatgtttcattatataagcgtacctactacatctt
gataaattctaaggaataacatagaaagtaaaaatgatagatgctgtatg
tagtgagcattgtccttatttatttatgtattcatggttttgtggcctca
tgaaatgaaatcattcatgtattgtctgaattcatgatgtcagggttcca
aactggatttcaagtgcttgtcattattctaccctagaccccaattccct
tatacaataaaaggatttctatatattttgtaaccttcctgaaacataac
ttgatttctatatgatttgagaataacaatttcagtaaattatatttgta
gtacatcttctgcaattaaagccttccaattttctactcctaaaaagata
agatgatgcagaatatctcatcatttggcaatttcctatcattagactgt
aatttcagcagtacagatacacctatgctcaacagcaagaaacaaggata
tgtccccaggaaatgacaattctgtcttgtgttgcacaaaactcacacct
aagaaactgaaaggaatttaagaaaaatgaatttggaaatactcagacac
ctgtaagttaccatgttctctgtggagatgaagtgtgcaacattgaaaca
aagtaaacatctcctctctggccttagctgaagattgaaagaaccatcat
agtacatatcttactactgatacagagtggctttttctttctcactcaca
caataatattataacactagacagctcacacttctgtcactatgactgtt
tattttcactgatagtactcatcatggaatttgtctacgatctcattatg
ctgacatgaataa

gaattctctgtttagctctgtaaaccattttttaaaattgggttatttac
ttttggggaatctaacttctcaagctctttatatattttagatatttagc
cctctgttgaatgtatggttagtgaagatctttcgtaatctgtaggctgc
cattttgttctattcacagtatcctttgccttacagaagtttttcagttt
caagatgtcccatttatcaattgttgatcttaaagcctgagtcattgatg
ttctgttcaggaaattttcttctgtgctaatgcattcaaagatatcccac
actttctcttctattagattcagtgtatctggttttctgttgaggttctt
gatccacttggacttgagttttgtgtagggtgataaatatggattgcaaa
atatcaatttgcattcttctgcattcagagtgccaggttagctgcatgat
ttgctgaagattctttgcttcaccatatggtttggcttctttgtcaaaaa
tcaagtgtctgtatgtgtgtgggtttatttctgggtcttcaattccatta
cattgatcaacttgtttgcctctgtactaacatgaggtgttttttagttt
agtttagttttgatttgttttttaaataaccatttctctgtaataaagct
tgagttcaggaatggcgattcccccagaagttcttttattacaaaaaaat
ttttgagatgtcatagggaactgctgttattgcttaactcctgagctcaa
agtgttcttcctgtattcagcctccaaagtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_21564893_21565924
seq2: B6Ng01-034P14.b_44_1056

seq1  GAATTCTAGATTAATATTGTTTGGACTGTACGTTCCATTGCATAGATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATTAATATTGTTTGGACTGTACGTTCCATTGCATAGATTAC  50

seq1  CTTCTACATCTAAAACTAAAGTAATTCTATGTATTTTTGATCCTATCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTACATCTAAAACTAAAGTAATTCTATGTATTTTTGATCCTATCAAC  100

seq1  TGATAGTAAAAGCATCAAGTATAGATAGTTCATTGTTCTCTATTTAGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGTAAAAGCATCAAGTATAGATAGTTCATTGTTCTCTATTTAGTCT  150

seq1  AACATAAGTATTATAGATGTTTCATTATATAAGCGTACCTACTACATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGTATTATAGATGTTTCATTATATAAGCGTACCTACTACATCTT  200

seq1  GATAAATTCTAAGGAATAACATAGAAAGTAAAAATGATAGATGCTGTATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATTCTAAGGAATAACATAGAAAGTAAAAATGATAGATGCTGTATG  250

seq1  TAGTGAGCATTGTCCTTATTTATTTATGTATTCATGGTTTTGTGGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGCATTGTCCTTATTTATTTATGTATTCATGGTTTTGTGGCCTCA  300

seq1  TGAAATGAAATCATTCATGTATTGTCTGAATTCATGATGTCAGGGTTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAAATCATTCATGTATTGTCTGAATTCATGATGTCAGGGTTCCA  350

seq1  AACTGGATTTCAAGTGCTTGTCATTATTCTACCCTAGACCCCAATTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGATTTCAAGTGCTTGTCATTATTCTACCCTAGACCCCAATTCCCT  400

seq1  TATACAATAAAAGGATTTCTATATATTTTGTAACCTTCCTGAAACATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAATAAAAGGATTTCTATATATTTTGTAACCTTCCTGAAACATAAC  450

seq1  TTGATTTCTATATGATTTGAGAATAACAATTTCAGTAAATTATATTTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCTATATGATTTGAGAATAACAATTTCAGTAAATTATATTTGTA  500

seq1  GTACATCTTCTGCAATTAAAGCCTTCCAATTTTCTACTCCTAAAAAGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTTCTGCAATTAAAGCCTTCCAATTTTCTACTCCTAAAAAGATA  550

seq1  AGATGATGCAGAATATCTCATCATTTGGCAATTTCCTATCATTAGACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGCAGAATATCTCATCATTTGGCAATTTCCTATCATTAGACTGT  600

seq1  AATTTCAGCAGTACAGATACACCTATGCTCAACAGCAAGAAACAAGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGCAGTACAGATACACCTATGCTCAACAGCAAGAAACAAGGATA  650

seq1  TGTCCCCAGGAAATGACAATTCTGTCTTGTGTTTGCACAAAACTCACACC  700
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGTCCCCAGGAAATGACAATTCTGTCTTGTG-TTGCACAAAACTCACACC  699

seq1  TAAGAAACTGAAAGGAATTTAAGAAAAATGAATTTGGAAATACTCAGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAACTGAAAGGAATTTAAGAAAAATGAATTTGGAAATACTCAGACA  749

seq1  CCTGTAAGTTACCATGTTCTCTGTGGAGATGAAGTGTGCAACATTGAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAGTTACCATGTTCTCTGTGGAGATGAAGTGTGCAACATTGAAAC  799

seq1  AAAGTAAACATCTCCTCTCTGGCCTTAGCTGAAGAATGAAAGAACCATCA  850
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAAGTAAACATCTCCTCTCTGGCCTTAGCTGAAGATTGAAAGAACCATCA  849

seq1  TAAGTACATATCTTACTACTGATACAGAGTGGC-TTTTCTTTCTCACTCA  899
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  T-AGTACATATCTTACTACTGATACAGAGTGGCTTTTTCTTTCTCACTCA  898

seq1  CACAAATAAATATTAATAACACTAGACAGCTCACACTTCTGTCACTATGA  949
      |||||   |||||| |||||||||||||||||||||||||||||||||||
seq2  CACAA--TAATATT-ATAACACTAGACAGCTCACACTTCTGTCACTATGA  945

seq1  CTGTTTTATTTTCACTGAATAAAGTACTCATCCATTGGGAATATGTTCTA  999
      ||| |||||||||||||   | ||||||||| |||  ||||| || ||||
seq2  CTG-TTTATTTTCACTG---ATAGTACTCAT-CAT--GGAATTTG-TCTA  987

seq1  CGATCTTCAGTGTATGCTGAAACCATGAGATAA  1032
      ||||| |||   ||||||||   ||||| ||||
seq2  CGATC-TCA--TTATGCTGA---CATGA-ATAA  1013


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