BAC Information

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BAC

Clone NameB6Ng01-035P18
Chromosome6 (Build37)
Map Location 12,758,859 - 12,759,683
singlet/doubletsinglet
Overlap genenone
Upstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879, Thsd7a
Downstream geneLOC667735, LOC384350, Tmem106b, Gm467, Gm725, 1700016P04Rik, LOC100040478, Tmem168, B630005N14Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035P18.g
ACCDH864306
length830
definitionDH864306|Mus musculus domesticus DNA, BAC clone: B6Ng01-035P18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatgatccagggagaactactgcactctattctctttccatttct
tccgtttctattgttatggcacctcaaataaacatgatgtattctcacag
tgttatttatagaacacaatgtgcttttagacgttcacggcagtgcattt
tcttttcctatgtgcttatatttttacctaatttatgcatgtcacttttt
aaattttctttttccaccatcaggcttcttctttcaaagatgtgtgattg
aaaatttctagctttggagaaagacatacctgcattgaaactgagcttaa
gttttcatgctaggacagcataaaaacaacaacaacaagaacaaaaaaaa
aaaaaaaaaaaaaaaaaaccacacacacataaacacacacaaacaaacaa
aaaacaaaaaaaacaccccaaaaaaaccaacaaaaaattagaatctaaag
ttttagtttcactgtctagaaataaaaataatagtatctctgcttaaaat
tattgtgataattaaacagaatagtgtacataccagactcagcaagagaa
agcaattgaataaatattggctttttttttttaatcaaggggctcaacat
attttccaaattggaagaagatgatcaatgttgggttcttgctacacttt
tttgacttgggaaacctcttttctacatctacccctttttctttttattt
tcttttatttaaaaaatttatataacaagataaaacaggaggctaacaca
ttagattggacaggactaccgttgaaagagagcccaagaattgtagaaat
agttgtttgggcaaaaaaaaaaaaaaaaaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_12758859_12759683
seq2: B6Ng01-035P18.g_67_896 (reverse)

seq1  TTTTTTTTTTTTTTTTTTGCCCAAACAACTATTTCTCCATTTCTTGTGCT  50
      |||||||||||||||||||||||||||||||||||| || |||||| |||
seq2  TTTTTTTTTTTTTTTTTTGCCCAAACAACTATTTCTACAATTCTTGGGCT  50

seq1  CTCTTTCTACTGTTTGTCTTGTCCAATTCTAATGTGTTAG-CTTCTGTTT  99
      ||||||| || | | ||| ||||||| ||||||||||||| || ||||||
seq2  CTCTTTCAAC-GGTAGTCCTGTCCAA-TCTAATGTGTTAGCCTCCTGTTT  98

seq1  TATCTTGTTATAT-AATTTTTTAAATAAAAGAAAATAAAAAGAAAAAGGG  148
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TATCTTGTTATATAAATTTTTTAAATAAAAGAAAATAAAAAGAAAAAGGG  148

seq1  GTAGATGTAG-AAAGAGGTTT-CCAAGTCAAAAAAGTGTAGCAAGAA-CC  195
      |||||||||| |||||||||| ||||||||||||||||||||||||| ||
seq2  GTAGATGTAGAAAAGAGGTTTCCCAAGTCAAAAAAGTGTAGCAAGAACCC  198

seq1  AACATTGATCATCTTCTTCAAATTTGGAAAATATGTTGAG-CCCTTGATT  244
      ||||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  AACATTGATCATCTTCTTCCAATTTGGAAAATATGTTGAGCCCCTTGATT  248

seq1  AAAAAAAAAAAGCCAATATTTATTCAA-TGCTTTCTCTTGCTGAGTCTGG  293
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAAAAAAAAAAGCCAATATTTATTCAATTGCTTTCTCTTGCTGAGTCTGG  298

seq1  TATGTACACTATTCTGTTTAATTATCACAATAATTTTAAGCAGAGATACT  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACACTATTCTGTTTAATTATCACAATAATTTTAAGCAGAGATACT  348

seq1  ATTATTTTTATTTCTAGACAGTGAAACTAAAACTTTAGATTCTAATTTTT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTTTATTTCTAGACAGTGAAACTAAAACTTTAGATTCTAATTTTT  398

seq1  TGTTGGTTTTTTTGGGGTGTTTTTTTTGTTTTTTGTTTGTTTGTGTGTGT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTTTTTTTGGGGTGTTTTTTTTGTTTTTTGTTTGTTTGTGTGTGT  448

seq1  TTATGTGTGTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTGTTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTGTGTGTGGTTTTTTTTTTTTTTTTTTTTTTTTTTGTTCTTGTTG  498

seq1  TTGTTGTTTTTATGCTGTCCTAGCATGAAAACTTAAGCTCAGTTTCAATG  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTTTTATGCTGTCCTAGCATGAAAACTTAAGCTCAGTTTCAATG  548

seq1  CAGGTATGTCTTTCTCCAAAGCTAGAAATTTTCAATCACACATCTTTGAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTATGTCTTTCTCCAAAGCTAGAAATTTTCAATCACACATCTTTGAA  598

seq1  AGAAGAAGCCTGATGGTGGAAAAAGAAAATTTAAAAAGTGACATGCATAA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAGCCTGATGGTGGAAAAAGAAAATTTAAAAAGTGACATGCATAA  648

seq1  ATTAGGTAAAAATATAAGCACATAGGAAAAGAAAATGCACTGCCGTGAAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGGTAAAAATATAAGCACATAGGAAAAGAAAATGCACTGCCGTGAAC  698

seq1  GTCTAAAAGCACATTGTGTTCTATAAATAACACTGTGAGAATACATCATG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAAAAGCACATTGTGTTCTATAAATAACACTGTGAGAATACATCATG  748

seq1  TTTATTTGAGGTGCCATAACAATAGAAACGGAAGAAATGGAAAGAGAATA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTGAGGTGCCATAACAATAGAAACGGAAGAAATGGAAAGAGAATA  798

seq1  GAGTGCAGTAGTTCTCCCTGGCTCATGAATTC  825
      ||||||||||||||||||||| ||||||||||
seq2  GAGTGCAGTAGTTCTCCCTGGATCATGAATTC  830