BAC Information

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BAC

Clone NameB6Ng01-038E04
Chromosome6 (Build37)
Map Location 19,451,161 - 19,452,176
singlet/doubletsinglet
Overlap genenone
Upstream geneCttnbp2, EG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038E04.bB6Ng01-038E04.g
ACCDH865873DH865874
length3811,132
definitionDH865873|Mus musculus domesticus DNA, BAC clone: B6Ng01-038E04, 5' end.DH865874|Mus musculus domesticus DNA, BAC clone: B6Ng01-038E04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgtgttcaaggccaatttatagagcaattctacaacagtcaatc
ttaggcagtgagggagttggaaaacagaaagctggtaataatgcaataca
acaatgtgggccatgttttagtcccagcaagcagcagaacgcaacagatt
tgaccatgtggctctgactttagagtcaagaataaaaaggactacttgga
caattgatgttggttagatggagctaagaaattagcagtgattaagaagc
tacctagttggtcattaatggaaggagagtttcttggtcctgtgaaggtt
ctatgccccagtataggggaatgtcagggccaggaagcaggagtgggtgg
gtttgggagcaggatgagggtgtaaaggata

gaattcaaggtcttacacgtgctcaactggccaggaagaactacgctgca
acaggatccttctgcacacatttattgggagaacattgattgcataggcg
aaagaagaaccccgaacaaggaaaatgatgctgcttatatacccatccat
gtgatgtgtcagctcctgattagctgctcactcatcaccctactactatg
ccccgggatgggcagtgacttggcacgaatttactcttgcacctgagcac
attacttgtttaccagttaggcacagcggtggcttatgatggcaattgct
cacggctctccacatctgccccattttattttattaaaacgcaagccact
ctttaatggatgaagatagaggtcaaatccctagtgtgcagaaatagggg
ccatgtacaggattggctcttaggctcacaggcaaccctgacctgctccc
gtgccatttttcctaggggagggacacttggacactcaaccctcatgcaa
atcgacttgtcttctaggagtccccaaacctctgagcgactcctatgcag
tgcttagcccaacaatccataagagtcaacgacctactcacttgtccctg
tgcaatgagtctagcctctaggggtgcaagagctgagtatagcctaaggc
aagctttaattgttgaatctctctcattttccacagaaccgaggagcgca
agagcagagaactcagatgtcaattaattcttaagcatggatagccaaat
gtcaggggaggacccttgttcaatggctgcaagtgtttgagtgataaaga
ccttgtcacggttttgttttgttttgggttctgagcttgcagaccaccag
agcatggacacaagcccacagcagatggcagcagcaaacaaattacccca
cccattccttaaagtagaaaagcagagtaaattgccaacaatgatggatg
ctattcgagttccattaagcttaaatctggtgtagatgtaaagaattgag
aaacacccgattcatcacgcatagtttcagaacacagagctcttcagttt
cactagcgggagcaccttcagcccaggaacattcaggaactccgtcctcc
agctccacctgccctgaatgtctggtcagcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19451161_19452176
seq2: B6Ng01-038E04.g_206_1196

seq1  CCCATCCATGTGATGTGTCAGCTCCTGATTAGCTGCTCACTCATCACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCCATGTGATGTGTCAGCTCCTGATTAGCTGCTCACTCATCACCCT  50

seq1  ACTACTATGCCCCGGGATGGGCAGTGACTTGGCACGAATTTACTCTTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTATGCCCCGGGATGGGCAGTGACTTGGCACGAATTTACTCTTGCA  100

seq1  CCTGAGCACATTACTTGTTTACCAGTTAGGCACAGCGGTGGCTTATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCACATTACTTGTTTACCAGTTAGGCACAGCGGTGGCTTATGATG  150

seq1  GCAATTGCTCACGGCTCTCCACATCTGCCCCATTTTATTTTATTAAAACG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATTGCTCACGGCTCTCCACATCTGCCCCATTTTATTTTATTAAAACG  200

seq1  CAAGCCACTCTTTAATGGATGAAGATAGAGGTCAAATCCCTAGTGTGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCCACTCTTTAATGGATGAAGATAGAGGTCAAATCCCTAGTGTGCAG  250

seq1  AAATAGGGGCCATGTACAGGATTGGCTCTTAGGCTCACAGGCAACCCTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGGGGCCATGTACAGGATTGGCTCTTAGGCTCACAGGCAACCCTGA  300

seq1  CCTGCTCCCGTGCCATTTTTCCTAGGGGAGGGACACTTGGACACTCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTCCCGTGCCATTTTTCCTAGGGGAGGGACACTTGGACACTCAACC  350

seq1  CTCATGCAAATCGACTTGTCTTCTAGGAGTCCCCAAACCTCTGAGCGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATGCAAATCGACTTGTCTTCTAGGAGTCCCCAAACCTCTGAGCGACT  400

seq1  CCTATGCAGTGCTTAGCCCAACAATCCATAAGAGTCAACGACCTACTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCAGTGCTTAGCCCAACAATCCATAAGAGTCAACGACCTACTCAC  450

seq1  TTGTCCCTGTGCAATGAGTCTAGCCTCTAGGGGTGCAAGAGCTGAGTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCTGTGCAATGAGTCTAGCCTCTAGGGGTGCAAGAGCTGAGTATA  500

seq1  GCCTAAGGCAAGCTTTAATTGTTGAATCTCTCTCATTTTCCACAGAACCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGGCAAGCTTTAATTGTTGAATCTCTCTCATTTTCCACAGAACCG  550

seq1  AGGAGCGCAAGAGCAGAGAACTCAGATGTCAATTAATTCTTAAGCATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCGCAAGAGCAGAGAACTCAGATGTCAATTAATTCTTAAGCATGGA  600

seq1  TAGCCAAATGTCAGGGGAGGACCCTTGTTCAATGGCTGCAAGTGTTTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAAATGTCAGGGGAGGACCCTTGTTCAATGGCTGCAAGTGTTTGAG  650

seq1  TGATAAAGACCTTGTCACGGTTTTGTTTTGTTTTGGGTTCTGAGCTTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGACCTTGTCACGGTTTTGTTTTGTTTTGGGTTCTGAGCTTGCA  700

seq1  GACCAACCAGAGCATGGACACAAGCCCACAGCAGATGGCAGCAGCAAACA  750
      |||| |||||||||||||||||||||||||||||||||||||||||||| 
seq2  GACC-ACCAGAGCATGGACACAAGCCCACAGCAGATGGCAGCAGCAAAC-  748

seq1  AAATTACCCCCACCCATTCCTTAAAGTAAGAAAAAGCAGAGGTAAAATTG  800
      |||||| |||||||||||||||||||||   ||||||||||   ||||||
seq2  AAATTA-CCCCACCCATTCCTTAAAGTA--GAAAAGCAGAG--TAAATTG  793

seq1  CCAACAATGATGGATGCTATTCGAGTTCCATTAAGGCTTAAAATCTGGTG  850
      |||||||||||||||||||||||||||||||||| |||| ||||||||||
seq2  CCAACAATGATGGATGCTATTCGAGTTCCATTAA-GCTT-AAATCTGGTG  841

seq1  TTAGATGTAAAGAATTGAGGAAACACCCGAATTCATCAACGGCATAGGTT  900
       ||||||||||||||||| |||||||||| ||||||||   ||||| |||
seq2  -TAGATGTAAAGAATTGA-GAAACACCCG-ATTCATCA--CGCATA-GTT  885

seq1  TCAGGAACACAGAGCTCTTCAGTTTTCACTAGCGGGAGCACCTCCAGCCA  950
      ||| |||||||||||||||||| |||||||||||||||||||| ||||| 
seq2  TCA-GAACACAGAGCTCTTCAG-TTTCACTAGCGGGAGCACCTTCAGCC-  932

seq1  CAGGAACATTCCAGGAACATTCACGTCCTCACAGCTCCACCTGCCCTGAA  1000
      |||||||||| |||||||  || ||||||| |||||||||||||||||||
seq2  CAGGAACATT-CAGGAAC--TC-CGTCCTC-CAGCTCCACCTGCCCTGAA  977

seq1  TTGCTCTGGTCAGCCT  1016
      |   ||||||||||||
seq2  T--GTCTGGTCAGCCT  991


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